MELO3C027227 (gene) Melon (DHL92) v4

Overview
NameMELO3C027227
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 8759873 .. 8760132 (-)
RNA-Seq ExpressionMELO3C027227
SyntenyMELO3C027227
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCATCTTTGCCTCCTCTCTCTGCTCCTCTTGCCCTTGCTTCTTCCCACCACCACCTCCAACCTTTTAGTCCACAGGAGAGCACTCCGGCCGGATGCCACGGCGAAGATCGGATCCCATGCCCATGAATTCAAATTGAAACCAAAGGGTGGTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGCGGCGGTTTGGACACATCGAATCAACGAGTATTTACGTTGGCATCAGGACCGAGCAAGAGAGGAGATGGGCACAA

mRNA sequence

ATGAGGCATCTTTGCCTCCTCTCTCTGCTCCTCTTGCCCTTGCTTCTTCCCACCACCACCTCCAACCTTTTAGTCCACAGGAGAGCACTCCGGCCGGATGCCACGGCGAAGATCGGATCCCATGCCCATGAATTCAAATTGAAACCAAAGGGTGGTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGCGGCGGTTTGGACACATCGAATCAACGAGTATTTACGTTGGCATCAGGACCGAGCAAGAGAGGAGATGGGCACAA

Coding sequence (CDS)

ATGAGGCATCTTTGCCTCCTCTCTCTGCTCCTCTTGCCCTTGCTTCTTCCCACCACCACCTCCAACCTTTTAGTCCACAGGAGAGCACTCCGGCCGGATGCCACGGCGAAGATCGGATCCCATGCCCATGAATTCAAATTGAAACCAAAGGGTGGTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGCGGCGGTTTGGACACATCGAATCAACGAGTATTTACGTTGGCATCAGGACCGAGCAAGAGAGGAGATGGGCAC

Protein sequence

MRHLCLLSLLLLPLLLPTTTSNLLVHRRALRPDATAKIGSHAHEFKLKPKGGGGGGGSGGGGGGLDTSNQRVFTLASGPSKRGDGH
Homology
[Close]
BLAST of MELO3C027227 vs. NCBI nr
Match: KGN63303.1 (hypothetical protein Csa_022628 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.7e-27
Identity = 74/86 (86.05%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 1   MRHLCLLSLLLLPLLLPTTTSNLLVHRRALRPDATAKIGSHAHEFKLKPKGGGGGGGSGG 60
           MRHLCLLSLLLLPLLLPTTTSNLLVH RAL+PDAT +IGSHAHEFKLKPK   GGG SGG
Sbjct: 50  MRHLCLLSLLLLPLLLPTTTSNLLVHGRALQPDATVEIGSHAHEFKLKPKDDDGGGDSGG 109

Query: 61  GGGGLDTSNQRVFTLASGPSKRGDGH 87
           GG   DTSNQRVFTLASGPS+RGDGH
Sbjct: 110 GGS--DTSNQRVFTLASGPSRRGDGH 133

[Close]
BLAST of MELO3C027227 vs. NCBI nr
Match: KAG6571236.1 (hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101.7 bits (252), Expect = 3.3e-18
Identity = 62/84 (73.81%), Postives = 68/84 (80.95%), Query Frame = 0 

Query: 3  HLCLLSLLLLPLLLPTTTSNLLVHRRALRPDATAKIGSHAHEFKLKPKGGGGGGGSGGGG 62
          HLCLLSLLLLPLLLP T+++LL HRRAL+ +      S AHEFKLKPK GGGGG   GGG
Sbjct: 5  HLCLLSLLLLPLLLPATSTSLL-HRRALQAN------SDAHEFKLKPKDGGGGGNE-GGG 64

Query: 63 GGLDTSNQRVFTLASGPSKRGDGH 87
          GG D SNQRVFTLASGPS+RGDGH
Sbjct: 65 GGFDMSNQRVFTLASGPSRRGDGH 80

[Close]
BLAST of MELO3C027227 vs. ExPASy TrEMBL
Match: A0A0A0LNA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425800 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.4e-28
Identity = 74/86 (86.05%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 1   MRHLCLLSLLLLPLLLPTTTSNLLVHRRALRPDATAKIGSHAHEFKLKPKGGGGGGGSGG 60
           MRHLCLLSLLLLPLLLPTTTSNLLVH RAL+PDAT +IGSHAHEFKLKPK   GGG SGG
Sbjct: 50  MRHLCLLSLLLLPLLLPTTTSNLLVHGRALQPDATVEIGSHAHEFKLKPKDDDGGGDSGG 109

Query: 61  GGGGLDTSNQRVFTLASGPSKRGDGH 87
           GG   DTSNQRVFTLASGPS+RGDGH
Sbjct: 110 GGS--DTSNQRVFTLASGPSRRGDGH 133

The following BLAST results are available for this feature:
BLAST of MELO3C027227 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63303.11.7e-2786.05hypothetical protein Csa_022628 [Cucumis sativus][more]
KAG6571236.13.3e-1873.81hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MELO3C027227 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C027227 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNA98.4e-2886.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425800 PE=4 SV=1[more]
BLAST of MELO3C027227 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027227.1MELO3C027227.1mRNA