MELO3C027127 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027127
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ribosomal_S7 domain-containing protein
Location	chr05: 21609823 .. 21610109 (-)
RNA-Seq Expression	MELO3C027127
Synteny	MELO3C027127

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGCCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA

mRNA sequence

tgtcaaaccaaaatacccaacaagcattagctctccctgaaaaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactccagtcactagccctgccttcggcatccccctccttgcggttaaggtaacgacttcgggcatggccagctcccatagtgtgacgggcggtgtgtacaaggcccgggaacgaattcaccgccgtatggctgaccggcgattactagcgattccggcttcatgcaggcgagttgcagcctacaatccgaactga

Coding sequence (CDS)

TCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGCCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA

Protein sequence

SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

Homology

[Close]

BLAST of MELO3C027127 vs. NCBI nr
Match: KAG4154841.1 (hypothetical protein ERO13_D03G074976v2 [Gossypium hirsutum])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 612 SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 671

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 672 GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 705

[Close]

BLAST of MELO3C027127 vs. NCBI nr
Match: OWM63425.1 (hypothetical protein CDL15_Pgr022170 [Punica granatum] >OWM76771.1 hypothetical protein CDL15_Pgr004983 [Punica granatum])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
          SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 2  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 61

Query: 61 GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
          GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 62 GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 95

[Close]

BLAST of MELO3C027127 vs. NCBI nr
Match: KAG4211951.1 (hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 633 SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 692

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 693 GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 726

[Close]

BLAST of MELO3C027127 vs. NCBI nr
Match: KAD5960821.1 (hypothetical protein E3N88_12293 [Mikania micrantha])

HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 90  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 149

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADR+LLAIPASCRRVAA NPN
Sbjct: 150 GVYKARERIHRRMADRQLLAIPASCRRVAACNPN 183

[Close]

BLAST of MELO3C027127 vs. NCBI nr
Match: KYP48942.1 (hypothetical protein KK1_029343, partial [Cajanus cajan])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 5  TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK 64
          TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK
Sbjct: 1  TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK 60

Query: 65 ARERIHRRMADRRLLAIPASCRRVAAYNPN 95
          ARERIHRRMADRRLLAIPASCRRVAAYNPN
Sbjct: 61 ARERIHRRMADRRLLAIPASCRRVAAYNPN 90

[Close]

BLAST of MELO3C027127 vs. ExPASy TrEMBL
Match: A0A218VSE2 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004983 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
          SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 2  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 61

Query: 61 GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
          GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 62 GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 95

[Close]

BLAST of MELO3C027127 vs. ExPASy TrEMBL
Match: A0A5N6P537 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_12293 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG
Sbjct: 90  SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 149

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADR+LLAIPASCRRVAA NPN
Sbjct: 150 GVYKARERIHRRMADRQLLAIPASCRRVAACNPN 183

[Close]

BLAST of MELO3C027127 vs. ExPASy TrEMBL
Match: A0A151S2B1 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_029343 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 5  TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK 64
          TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK
Sbjct: 1  TQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYK 60

Query: 65 ARERIHRRMADRRLLAIPASCRRVAAYNPN 95
          ARERIHRRMADRRLLAIPASCRRVAAYNPN
Sbjct: 61 ARERIHRRMADRRLLAIPASCRRVAAYNPN 90

[Close]

BLAST of MELO3C027127 vs. ExPASy TrEMBL
Match: A0A078E1E5 (BnaC09g29260D protein OS=Brassica napus OX=3708 GN=BnaC09g29260D PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.6e-42
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SN NTQ+ALALPEKEVIQPHLPVRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTG
Sbjct: 9   SNLNTQEALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTG 68

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 69  GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 102

[Close]

BLAST of MELO3C027127 vs. ExPASy TrEMBL
Match: A0A6D2HHK8 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS412 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.6e-42
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1   SNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTG 60
           SN NTQ+ALALPEKEVIQPHLPVRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTG
Sbjct: 9   SNLNTQEALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTG 68

Query: 61  GVYKARERIHRRMADRRLLAIPASCRRVAAYNPN 95
           GVYKARERIHRRMADRRLLAIPASCRRVAA NPN
Sbjct: 69  GVYKARERIHRRMADRRLLAIPASCRRVAACNPN 102

The following BLAST results are available for this feature:

BLAST of MELO3C027127 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG4154841.1	2.5e-43	98.94	hypothetical protein ERO13_D03G074976v2 [Gossypium hirsutum]	[more]
OWM63425.1	2.5e-43	98.94	hypothetical protein CDL15_Pgr022170 [Punica granatum] >OWM76771.1 hypothetical ...	[more]
KAG4211951.1	2.5e-43	98.94	hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum]	[more]
KAD5960821.1	7.2e-43	97.87	hypothetical protein E3N88_12293 [Mikania micrantha]	[more]
KYP48942.1	4.7e-42	100.00	hypothetical protein KK1_029343, partial [Cajanus cajan]	[more]

BLAST of MELO3C027127 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027127 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218VSE2	1.2e-43	98.94	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004983 PE=4 SV=1	[more]
A0A5N6P537	3.5e-43	97.87	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_12293 PE=4 SV=1	[more]
A0A151S2B1	2.3e-42	100.00	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_029343 PE=4 S...	[more]
A0A078E1E5	6.6e-42	95.74	BnaC09g29260D protein OS=Brassica napus OX=3708 GN=BnaC09g29260D PE=4 SV=1	[more]
A0A6D2HHK8	6.6e-42	95.74	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS412 PE...	[more]

BLAST of MELO3C027127 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38146	FAMILY NOT NAMED	coord: 1..94
None	No IPR available	PANTHER	PTHR38146:SF11	BNAC09G29260D PROTEIN	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027127.1	MELO3C027127.1	mRNA