MELO3C027103 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027103
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	SANT domain-containing protein
Location	chr06: 31502837 .. 31503843 (-)
RNA-Seq Expression	MELO3C027103
Synteny	MELO3C027103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTTTCTCTCTCTCTCTCTCAAATCTCTTCAACCACTCTCTTAAATTTCATCAAACTCCATCTCTAAACATTTACCCAAAATCTCTCTCCTCTCTCTCTCATCACAAATATTAGGTTTCAATTGAAAACCCCATCTTCCAAAAATCACAAAAGAAATCAGTTATATTCTCTCTTTCTCTCCCAACAAATCATAAAAAACCCTTCCAATCTTTTCCATCTTCTTCTTCTTCTTCTTCTTAGCTACAAGAATCCAAATCCAAAGAATATCTCTCCCTCCTCCCAAAAGAAAAAAAAAATCAAATTATTAATCATCATCACCATCATCATCATCAAGAACAAGAAGCAAGAAAAAAAATGGAACTTTTTCCAGCTCAACCAGATTTGTCTCTTCAAATTAGCCCTCCAAATTCATCAACAAATTCAAAACCCTCTTCCAATTCCAATTGGAGAACACAACCCATTTCTTCTATTTCTCCACAACACCCTTTAGATTTGATGTTTTGGAATCACAATAATAATAATAATATTAATAAAAGTTTTCCTTCTAATAATTCTTCTTCTAATTCTTCTAATTTTGACCCATCTCTTTCAAATTCCTCCAATTTCCTCTCCCATCATTTTCCTCCGACCGTCAATGGGGGTGGCGCCGGCCTTTTTCCACCGCCATCTCCACGATCTTCACCCTCAAGGGCTTGGATTCTTGAGACCCATCAGAGGAATTCCAGTTTATCAAAACCCTCCTTCCTCATCCACGTCTTCTTCCTCATCTTCTTATCCGATATTCGGAGGGAGTGGTGGCGGTGGCGGTGGCGGTGGTAGTCAGTTTAGTTATAATGGTCTCCGATCGAGATTTTTGGCGAGGTTTCCAGCGAAACGAAGCATCCGAGCACCAAGAATGCGGTGGACCACTACTCTCCATGCTCGTTTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAAAGTAAGCAAAAGCTTACACTCATATCTTTCTCTCTCTCTCTCTC

mRNA sequence

CTCTTTTCTCTCTCTCTCTCTCAAATCTCTTCAACCACTCTCTTAAATTTCATCAAACTCCATCTCTAAACATTTACCCAAAATCTCTCTCCTCTCTCTCTCATCACAAATATTAGGTTTCAATTGAAAACCCCATCTTCCAAAAATCACAAAAGAAATCAGTTATATTCTCTCTTTCTCTCCCAACAAATCATAAAAAACCCTTCCAATCTTTTCCATCTTCTTCTTCTTCTTCTTCTTAGCTACAAGAATCCAAATCCAAAGAATATCTCTCCCTCCTCCCAAAAGAAAAAAAAAATCAAATTATTAATCATCATCACCATCATCATCATCAAGAACAAGAAGCAAGAAAAAAAATGGAACTTTTTCCAGCTCAACCAGATTTGTCTCTTCAAATTAGCCCTCCAAATTCATCAACAAATTCAAAACCCTCTTCCAATTCCAATTGGAGAACACAACCCATTTCTTCTATTTCTCCACAACACCCTTTAGATTTGATGTTTTGGAATCACAATAATAATAATAATATTAATAAAAGTTTTCCTTCTAATAATTCTTCTTCTAATTCTTCTAATTTTGACCCATCTCTTTCAAATTCCTCCAATTTCCTCTCCCATCATTTTCCTCCGACCGTCAATGGGGGTGGCGCCGGCCTTTTTCCACCGCCATCTCCACGATCTTCACCCTCAAGGGCTTGGATTCTTGAGACCCATCAGAGGAATTCCAGTTTATCAAAACCCTCCTTCCTCATCCACGTCTTCTTCCTCATCTTCTTATCCGATATTCGGAGGGAGTGGTGGCGGTGGCGGTGGCGGTGGTAGTCAGTTTAGTTATAATGGTCTCCGATCGAGATTTTTGGCGAGGTTTCCAGCGAAACGAAGCATCCGAGCACCAAGAATGCGGTGGACCACTACTCTCCATGCTCGTTTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAAAGTAAGCAAAAGCTTACACTCATATCTTTCTCTCTCTCTCTCTC

Coding sequence (CDS)

ATGGAACTTTTTCCAGCTCAACCAGATTTGTCTCTTCAAATTAGCCCTCCAAATTCATCAACAAATTCAAAACCCTCTTCCAATTCCAATTGGAGAACACAACCCATTTCTTCTATTTCTCCACAACACCCTTTAGATTTGATGTTTTGGAATCACAATAATAATAATAATATTAATAAAAGTTTTCCTTCTAATAATTCTTCTTCTAATTCTTCTAATTTTGACCCATCTCTTTCAAATTCCTCCAATTTCCTCTCCCATCATTTTCCTCCGACCGTCAATGGGGGTGGCGCCGGCCTTTTTCCACCGCCATCTCCACGATCTTCACCCTCAAGGGCTTGGATTCTTGAGACCCATCAGAGGAATTCCAGTTTATCAAAACCCTCCTTCCTCATCCACGTCTTCTTCCTCATCTTCTTATCCGATATTCGGAGGGAGTGGTGGCGGTGGCGGTGGCGGTGGTAG

Protein sequence

MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINKSFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLFPPPSPRSSPSRAWILETHQRNSSLSKPSFLIHVFFLIFLSDIRREWWRWRWRW

Homology

[Close]

BLAST of MELO3C027103 vs. NCBI nr
Match: KAA0053021.1 (putative transcription factor KAN2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 102
           SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF
Sbjct: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 101

[Close]

BLAST of MELO3C027103 vs. NCBI nr
Match: XP_008465527.1 (PREDICTED: probable transcription factor KAN2 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 102
           SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF
Sbjct: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 101

[Close]

BLAST of MELO3C027103 vs. NCBI nr
Match: XP_011650330.1 (probable transcription factor KAN2 isoform X2 [Cucumis sativus] >KGN55725.1 hypothetical protein Csa_011538 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-38
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPS NSNWRTQPISSISPQHPLDLMFWN+NNN   NK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSPNSNWRTQPISSISPQHPLDLMFWNNNNN---NK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVN-GGGAGLF 102
           SFPS+NSSSNSSNFDPSLSNSSNFL HHFPP VN GGGA LF
Sbjct: 61  SFPSHNSSSNSSNFDPSLSNSSNFLPHHFPPAVNGGGGAALF 99

[Close]

BLAST of MELO3C027103 vs. NCBI nr
Match: XP_004150668.1 (probable transcription factor KAN2 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-38
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPS NSNWRTQPISSISPQHPLDLMFWN+NNN   NK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSPNSNWRTQPISSISPQHPLDLMFWNNNNN---NK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVN-GGGAGLF 102
           SFPS+NSSSNSSNFDPSLSNSSNFL HHFPP VN GGGA LF
Sbjct: 61  SFPSHNSSSNSSNFDPSLSNSSNFLPHHFPPAVNGGGGAALF 99

[Close]

BLAST of MELO3C027103 vs. NCBI nr
Match: XP_022923522.1 (probable transcription factor KAN2 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-19
Identity = 72/107 (67.29%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQ-PISSISPQHPLDLMFWNHNNNNNIN 60
           MELFPAQPDLSLQISPPNSSTNSKPSSN  WR Q PISS+  Q+PLDL+ WN       N
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNGGWRRQHPISSMPSQNPLDLVSWN-------N 60

Query: 61  KSFPSNNSSSNSSNFDPS--LSN---SSNFLSHHFP--PTVNGGGAG 100
           K   +N SSS+SSNFDPS  LSN   SS+FL  HFP    VNGGGAG
Sbjct: 61  KLPSTNPSSSSSSNFDPSPLLSNPNSSSDFLHRHFPTATAVNGGGAG 100

[Close]

BLAST of MELO3C027103 vs. ExPASy TrEMBL
Match: A0A5A7UHK5 (Putative transcription factor KAN2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001330 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.0e-47
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 102
           SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF
Sbjct: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 101

[Close]

BLAST of MELO3C027103 vs. ExPASy TrEMBL
Match: A0A1S3CP02 (probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503150 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.0e-47
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 102
           SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF
Sbjct: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVNGGGAGLF 101

[Close]

BLAST of MELO3C027103 vs. ExPASy TrEMBL
Match: A0A0A0L171 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008330 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQHPLDLMFWNHNNNNNINK 60
           MELFPAQPDLSLQISPPNSSTNSKPS NSNWRTQPISSISPQHPLDLMFWN+NNN   NK
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSPNSNWRTQPISSISPQHPLDLMFWNNNNN---NK 60

Query: 61  SFPSNNSSSNSSNFDPSLSNSSNFLSHHFPPTVN-GGGAGLF 102
           SFPS+NSSSNSSNFDPSLSNSSNFL HHFPP VN GGGA LF
Sbjct: 61  SFPSHNSSSNSSNFDPSLSNSSNFLPHHFPPAVNGGGGAALF 99

[Close]

BLAST of MELO3C027103 vs. ExPASy TrEMBL
Match: A0A6J1E6C4 (probable transcription factor KAN2 OS=Cucurbita moschata OX=3662 GN=LOC111431165 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 72/107 (67.29%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQ-PISSISPQHPLDLMFWNHNNNNNIN 60
           MELFPAQPDLSLQISPPNSSTNSKPSSN  WR Q PISS+  Q+PLDL+ WN       N
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNGGWRRQHPISSMPSQNPLDLVSWN-------N 60

Query: 61  KSFPSNNSSSNSSNFDPS--LSN---SSNFLSHHFP--PTVNGGGAG 100
           K   +N SSS+SSNFDPS  LSN   SS+FL  HFP    VNGGGAG
Sbjct: 61  KLPSTNPSSSSSSNFDPSPLLSNPNSSSDFLHRHFPTATAVNGGGAG 100

[Close]

BLAST of MELO3C027103 vs. ExPASy TrEMBL
Match: A0A6J1KUZ9 (probable transcription factor KAN2 OS=Cucurbita maxima OX=3661 GN=LOC111498429 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.8e-19
Identity = 71/107 (66.36%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQ-PISSISPQHPLDLMFWNHNNNNNIN 60
           MELFPAQPDLSLQISPPNSSTNSKPSSN  WR Q PISS+  Q+PLDL+ WN       N
Sbjct: 1   MELFPAQPDLSLQISPPNSSTNSKPSSNGGWRRQHPISSMPSQNPLDLVSWN-------N 60

Query: 61  KSFPSNNSSSNSSNFDPS--LSN---SSNFLSHHFP--PTVNGGGAG 100
           K   +N SSS+SSNFDPS  LSN   SS+FL  HFP   T NG GAG
Sbjct: 61  KLPSTNPSSSSSSNFDPSPLLSNPNSSSDFLHRHFPTATTANGDGAG 100

[Close]

BLAST of MELO3C027103 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 8.8e-04
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 1  MELFPAQPDLSLQISPPNSSTNSKPSSNSNWRTQPISSISPQH-PLDLMFWNHNNNNNIN 60
          MELFPAQPDLSLQISPP    NSKPS  S W+ +  ++    H  LDL FW    ++  +
Sbjct: 1  MELFPAQPDLSLQISPP----NSKPS--STWQRRRSTTDQEDHEELDLGFWRRALDSRTS 60

Query: 61 KSFPSNNSSSNSSNF-DPSLSNSSNF---LSHHFP 91
              ++ S + +  F D SLSN S+      HH P
Sbjct: 61 SLVSNSTSKTINHPFQDLSLSNISHHQQQQQHHHP 89

The following BLAST results are available for this feature:

BLAST of MELO3C027103 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053021.1	1.0e-46	100.00	putative transcription factor KAN2 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008465527.1	1.0e-46	100.00	PREDICTED: probable transcription factor KAN2 [Cucumis melo]	[more]
XP_011650330.1	2.3e-38	90.20	probable transcription factor KAN2 isoform X2 [Cucumis sativus] >KGN55725.1 hypo...	[more]
XP_004150668.1	2.3e-38	90.20	probable transcription factor KAN2 isoform X1 [Cucumis sativus]	[more]
XP_022923522.1	2.4e-19	67.29	probable transcription factor KAN2 [Cucurbita moschata]	[more]

BLAST of MELO3C027103 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHK5	5.0e-47	100.00	Putative transcription factor KAN2 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CP02	5.0e-47	100.00	probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503150 PE=4 ...	[more]
A0A0A0L171	1.1e-38	90.20	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008330 PE=4 S...	[more]
A0A6J1E6C4	1.2e-19	67.29	probable transcription factor KAN2 OS=Cucurbita moschata OX=3662 GN=LOC111431165...	[more]
A0A6J1KUZ9	5.8e-19	66.36	probable transcription factor KAN2 OS=Cucurbita maxima OX=3661 GN=LOC111498429 P...	[more]

BLAST of MELO3C027103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32240.1	8.8e-04	43.16	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027103.1	MELO3C027103.1	mRNA