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MELO3C027025 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATGTTTTTTTCTAGCTTATTCACTATCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTTACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTTT ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATGTTTTTTTCTAGCTTATTCACTATCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTTACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTTT ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATGTTTTTTTCTAGCTTATTCACTATCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTTACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTT MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGV Homology
BLAST of MELO3C027025 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]) HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of MELO3C027025 vs. NCBI nr
Match: KAA0059530.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of MELO3C027025 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 1.7e-41 Identity = 85/123 (69.11%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of MELO3C027025 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.2 bits (435), Expect = 2.8e-39 Identity = 82/121 (67.77%), Postives = 97/121 (80.17%), Query Frame = 0
BLAST of MELO3C027025 vs. NCBI nr
Match: XP_022975116.1 (S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975441.1 S-protein homolog 3-like, partial [Cucurbita maxima]) HSP 1 Score: 167.9 bits (424), Expect = 5.3e-38 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.1e-17 Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.6e-13 Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 5.2e-12 Identity = 47/114 (41.23%), Postives = 58/114 (50.88%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy TrEMBL
Match: A0A5A7UWN1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00420 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.3e-53 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 8.5e-42 Identity = 85/123 (69.11%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy TrEMBL
Match: A0A6J1IDA7 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of MELO3C027025 vs. ExPASy TrEMBL
Match: A0A6J1IDI1 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38 Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of MELO3C027025 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 94.0 bits (232), Expect = 9.0e-20 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of MELO3C027025 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of MELO3C027025 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 89.0 bits (219), Expect = 2.9e-18 Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of MELO3C027025 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15 Identity = 42/96 (43.75%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of MELO3C027025 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 78.2 bits (191), Expect = 5.1e-15 Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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