MELO3C026724.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C026724.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 17294340 .. 17294540 (+)
RNA-Seq ExpressionMELO3C026724.jh1
SyntenyMELO3C026724.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTAAGAACAACACTACAGAGAGACAAGAAGCGGACACCTTTCAGGTTGCGGTAGAGGAATTCACCAAGGAAATGGAAAACATGAGCCCTATTGAGCCAAGGATATCACCTGCCGATCTAAGGTTGAGAATCGCAACGCAACCCAAGAAGACAAAAAAGGGGTTGGGATATCCAGACCCGATGATGCACAACAAG

mRNA sequence

ATGGCAGCTAAGAACAACACTACAGAGAGACAAGAAGCGGACACCTTTCAGGTTGCGGTAGAGGAATTCACCAAGGAAATGGAAAACATGAGCCCTATTGAGCCAAGGATATCACCTGCCGATCTAAGGTTGAGAATCGCAACGCAACCCAAGAAGACAAAAAAGGGGTTGGGATATCCAGACCCGATGATGCACAACAAG

Coding sequence (CDS)

ATGGCAGCTAAGAACAACACTACAGAGAGACAAGAAGCGGACACCTTTCAGGTTGCGGTAGAGGAATTCACCAAGGAAATGGAAAACATGAGCCCTATTGAGCCAAGGATATCACCTGCCGATCTAAGGTTGAGAATCGCAACGCAACCCAAGAAGACAAAAAAGGGGTTGGGATATCCAGACCCGATGATGCACAACAAG

Protein sequence

MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLGYPDPMMHNK
Homology
BLAST of MELO3C026724.jh1 vs. NCBI nr
Match: TYJ96579.1 (hypothetical protein E5676_scaffold791G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 9.40e-39
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLGYP 60
          MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQP KTKKGLGYP
Sbjct: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPNKTKKGLGYP 60

Query: 61 DPMMHNK 67
          DPMMHNK
Sbjct: 61 DPMMHNK 67

BLAST of MELO3C026724.jh1 vs. NCBI nr
Match: KAA0067806.1 (hypothetical protein E6C27_scaffold2484G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (328), Expect = 1.21e-37
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLGYP 60
          MAAKNNTT+RQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKK KKGLGYP
Sbjct: 1  MAAKNNTTKRQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKKKKGLGYP 60

Query: 61 DPMMHNK 67
          DPMMHNK
Sbjct: 61 DPMMHNK 67

BLAST of MELO3C026724.jh1 vs. NCBI nr
Match: KAA0067936.1 (hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 4.05e-09
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 8  TERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTK 54
          TE+QE D  +V  EEFTKE+ENMS +EPR+SP +  LR A QPKK K
Sbjct: 3  TEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIK 49

BLAST of MELO3C026724.jh1 vs. NCBI nr
Match: KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.02e-07
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 2   AAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLG 58
           A +   TE Q+ D  +V  EEF+KE+E MSP+EPR+SP + RL+   QPKK K   G
Sbjct: 81  ATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKKKSKAG 137

BLAST of MELO3C026724.jh1 vs. NCBI nr
Match: KAA0053120.1 (hypothetical protein E6C27_scaffold778G00540 [Cucumis melo var. makuwa] >TYJ95495.1 hypothetical protein E5676_scaffold441G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 1.65e-05
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKK 55
          +  +    E QE D  ++   EF +E+ NMSP+EPR+SP +L LR+AT  KKTKK
Sbjct: 8  LVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATT-KKTKK 61

BLAST of MELO3C026724.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold791G00110 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 4.55e-39
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLGYP 60
          MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQP KTKKGLGYP
Sbjct: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPNKTKKGLGYP 60

Query: 61 DPMMHNK 67
          DPMMHNK
Sbjct: 61 DPMMHNK 67

BLAST of MELO3C026724.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VMM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00090 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 5.85e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLGYP 60
          MAAKNNTT+RQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKK KKGLGYP
Sbjct: 1  MAAKNNTTKRQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKKKKGLGYP 60

Query: 61 DPMMHNK 67
          DPMMHNK
Sbjct: 61 DPMMHNK 67

BLAST of MELO3C026724.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001080 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.96e-09
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 8  TERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTK 54
          TE+QE D  +V  EEFTKE+ENMS +EPR+SP +  LR A QPKK K
Sbjct: 3  TEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIK 49

BLAST of MELO3C026724.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.94e-08
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 2   AAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKKGLG 58
           A +   TE Q+ D  +V  EEF+KE+E MSP+EPR+SP + RL+   QPKK K   G
Sbjct: 81  ATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKKKSKAG 137

BLAST of MELO3C026724.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BAJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00150 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.00e-06
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 1  MAAKNNTTERQEADTFQVAVEEFTKEMENMSPIEPRISPADLRLRIATQPKKTKK 55
          +  +    E QE D  ++   EF +E+ NMSP+EPR+SP +L LR+AT  KKTKK
Sbjct: 8  LVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATT-KKTKK 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ96579.19.40e-3998.51hypothetical protein E5676_scaffold791G00110 [Cucumis melo var. makuwa][more]
KAA0067806.11.21e-3797.01hypothetical protein E6C27_scaffold2484G00090 [Cucumis melo var. makuwa][more]
KAA0067936.14.05e-0961.70hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa][more]
KAA0043535.11.02e-0749.12hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa][more]
KAA0053120.11.65e-0547.27hypothetical protein E6C27_scaffold778G00540 [Cucumis melo var. makuwa] >TYJ9549... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BC254.55e-3998.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VMM85.85e-3897.01Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VMZ41.96e-0961.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TQ544.94e-0849.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BAJ28.00e-0647.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026724.jh1.t1MELO3C026724.jh1.t1mRNA