MELO3C026706 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026706
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 21355905 .. 21356624 (-)
RNA-Seq Expression	MELO3C026706
Synteny	MELO3C026706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAACAACAATTTCAACATCACCAATTTCTCTATCCCTTAAACAATCTCATTCCCATCATCATCGTCCTCATCATCATCTCTTTCACCTAACTCCATATCTAACTCTTCTCTTCCTCTTTCTGACAATCGCCATCCTCGGAAGCCCTTCCATGGCTGCCTTGGAGCCCCTCAAGTCTGTGTCGGAATCCACCGGCACACGGCGGAGAGATGATCGTCGTTTTGAATCTGCCGTTTTACAGGTTCCGAGCGGACCGAAACCTACTTCGAACAATTTGTTGCAGGAACAGAGGTTGGAGTCCGAATCCAGCAACAGACGGTGGACAGACTATCGTCGTTTTGAATCTGACGGACCTAAACCCATTTCCAACAGTTCGATGCAGAAACTGGTGTCGGAGTCGGAATCAAACGGCAGGCGGTGGAGAGGCTATCGTCGATTTGAATCTGTTGCGAGCGGAACGAAGTCTAGTTCGAAAAATCCACCGCGGAAAAAGAGATTGGAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTATCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACAACAAAAAGAATCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACTCGGAATCCGGCGGCTGGCGGCGGAGAAATGACCGTCTATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAA

mRNA sequence

ATGGCCGCAACAACAATTTCAACATCACCAATTTCTCTATCCCTTAAACAATCTCATTCCCATCATCATCGTCCTCATCATCATCTCTTTCACCTAACTCCATATCTAACTCTTCTCTTCCTCTTTCTGACAATCGCCATCCTCGGAAGCCCTTCCATGGCTGCCTTGGAGCCCCTCAAGTCTGTGTCGGAATCCACCGGCACACGGCGGAGAGATGATCGTCGTTTTGAATCTGCCGTTTTACAGGTTCCGAGCGGACCGAAACCTACTTCGAACAATTTGTTGCAGGAACAGAGGTTGGAGTCCGAATCCAGCAACAGACGGTGGACAGACTATCGTCGTTTTGAATCTGACGGACCTAAACCCATTTCCAACAGTTCGATGCAGAAACTGGTGTCGGAGTCGGAATCAAACGGCAGGCGGTGGAGAGGCTATCGTCGATTTGAATCTGTTGCGAGCGGAACGAAGTCTAGTTCGAAAAATCCACCGCGGAAAAAGAGATTGGAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTATCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACAACAAAAAGAATCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACTCGGAATCCGGCGGCTGGCGGCGGAGAAATGACCGTCTATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAA

Coding sequence (CDS)

ATGGCCGCAACAACAATTTCAACATCACCAATTTCTCTATCCCTTAAACAATCTCATTCCCATCATCATCGTCCTCATCATCATCTCTTTCACCTAACTCCATATCTAACTCTTCTCTTCCTCTTTCTGACAATCGCCATCCTCGGAAGCCCTTCCATGGCTGCCTTGGAGCCCCTCAAGTCTGTGTCGGAATCCACCGGCACACGGCGGAGAGATGATCGTCGTTTTGAATCTGCCGTTTTACAGGTTCCGAGCGGACCGAAACCTACTTCGAACAATTTGTTGCAGGAACAGAGGTTGGAGTCCGAATCCAGCAACAGACGGTGGACAGACTATCGTCGTTTTGAATCTGACGGACCTAAACCCATTTCCAACAGTTCGATGCAGAAACTGGTGTCGGAGTCGGAATCAAACGGCAGGCGGTGGAGAGGCTATCGTCGATTTGAATCTGTTGCGAGCGGAACGAAGTCTAGTTCGAAAAATCCACCGCGGAAAAAGAGATTGGAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTATCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACAACAAAAAGAATCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACTCGGAATCCGGCGGCTGGCGGCGGAGAAATGACCGTCTATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAA

Protein sequence

MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLKSVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGPKPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDYRRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN

Homology

[Close]

BLAST of MELO3C026706 vs. NCBI nr
Match: KAA0068203.1 (hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK21123.1 hypothetical protein E5676_scaffold392G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK
Sbjct: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
           SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP
Sbjct: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
           KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY
Sbjct: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
           RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN
Sbjct: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 239

[Close]

BLAST of MELO3C026706 vs. NCBI nr
Match: KAE8650847.1 (hypothetical protein Csa_002136 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 5.5e-71
Identity = 166/239 (69.46%), Postives = 171/239 (71.55%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MAA TISTSPIS SLKQSH+ HH  +HHLFHL P LTLLFLFLTI ILGSPSMAALEP  
Sbjct: 1   MAAATISTSPISQSLKQSHTQHH--YHHLFHLIPSLTLLFLFLTITILGSPSMAALEPTN 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
           S SESTGTRRRDD RFESAVLQVPSG KPTSNNLLQ+QRL SES +R   DYRRFESD  
Sbjct: 61  SESESTGTRRRDDLRFESAVLQVPSGLKPTSNNLLQKQRLASESCSRLRRDYRRFESDES 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
           KPISN  MQKLVSESE NGRRWRGYRRFES ASGTK SS NPPRKKRL+ ESSGR     
Sbjct: 121 KPISNIPMQKLVSESELNGRRWRGYRRFESAASGTKPSSNNPPRKKRLKLESSGR----- 180

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
                                              RRRND LFESAAHEVPSGPNPISN
Sbjct: 181 -----------------------------------RRRNDHLFESAAHEVPSGPNPISN 197

[Close]

BLAST of MELO3C026706 vs. NCBI nr
Match: XP_022931103.1 (uncharacterized protein LOC111437389 [Cucurbita moschata])

HSP 1 Score: 85.1 bits (209), Expect = 8.9e-13
Identity = 87/239 (36.40%), Postives = 107/239 (44.77%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MA  + S+SP S S +              +L P LTLLF+FLT  +LGSPSMAA     
Sbjct: 1   MATASSSSSPNSSSSR--------------NLIPSLTLLFVFLTAVVLGSPSMAA----- 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
                           ES    +P     + NN  ++ RLESES  RR  D R  ES   
Sbjct: 61  ---------------SESQTRLIPH----SLNNPPRKHRLESESGGRRPRDDRPLES--- 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
                                      FE V SGT     NPPRK+R +SES GR     
Sbjct: 121 -------------------------AVFE-VTSGTNHVLNNPPRKQRSDSESGGR----- 155

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
                        + +  SN+PP +Q  + +SGG +RR+D  FESAAHEVPSGPNPISN
Sbjct: 181 -----------GRRNDRDSNSPPRQQSLDKKSGG-QRRDDSRFESAAHEVPSGPNPISN 155

[Close]

BLAST of MELO3C026706 vs. ExPASy TrEMBL
Match: A0A5D3DC24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001030 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.9e-127
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK
Sbjct: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
           SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP
Sbjct: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
           KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY
Sbjct: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
           RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN
Sbjct: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 239

[Close]

BLAST of MELO3C026706 vs. ExPASy TrEMBL
Match: A0A0A0LE33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.7e-97
Identity = 200/239 (83.68%), Postives = 206/239 (86.19%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MAA TISTSPIS SLKQSH+ HH  +HHLFHL P LTLLFLFLTI ILGSPSMAALEP  
Sbjct: 1   MAAATISTSPISQSLKQSHTQHH--YHHLFHLIPSLTLLFLFLTITILGSPSMAALEPTN 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
           S SESTGTRRRDD RFESAVLQVPSG KPTSNNLLQ+QRL SES +R   DYRRFESD  
Sbjct: 61  SESESTGTRRRDDLRFESAVLQVPSGLKPTSNNLLQKQRLASESCSRLRRDYRRFESDES 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
           KPISN  MQKLVSESE NGRRWRGYRRFES ASGTK SS NPPRKKRL+ ESSGRRWRDY
Sbjct: 121 KPISNIPMQKLVSESELNGRRWRGYRRFESAASGTKPSSNNPPRKKRLKLESSGRRWRDY 180

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
           RRFESA LKVP  K+NHASNNPPLKQKPNSESG  RRRND LFESAAHEVPSGPNPISN
Sbjct: 181 RRFESAVLKVPTGKRNHASNNPPLKQKPNSESGDRRRRNDHLFESAAHEVPSGPNPISN 237

[Close]

BLAST of MELO3C026706 vs. ExPASy TrEMBL
Match: A0A6J1EXF7 (uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC111437389 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-13
Identity = 87/239 (36.40%), Postives = 107/239 (44.77%), Query Frame = 0


Query: 1   MAATTISTSPISLSLKQSHSHHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPLK 60
           MA  + S+SP S S +              +L P LTLLF+FLT  +LGSPSMAA     
Sbjct: 1   MATASSSSSPNSSSSR--------------NLIPSLTLLFVFLTAVVLGSPSMAA----- 60

Query: 61  SVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDGP 120
                           ES    +P     + NN  ++ RLESES  RR  D R  ES   
Sbjct: 61  ---------------SESQTRLIPH----SLNNPPRKHRLESESGGRRPRDDRPLES--- 120

Query: 121 KPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRDY 180
                                      FE V SGT     NPPRK+R +SES GR     
Sbjct: 121 -------------------------AVFE-VTSGTNHVLNNPPRKQRSDSESGGR----- 155

Query: 181 RRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 240
                        + +  SN+PP +Q  + +SGG +RR+D  FESAAHEVPSGPNPISN
Sbjct: 181 -----------GRRNDRDSNSPPRQQSLDKKSGG-QRRDDSRFESAAHEVPSGPNPISN 155

The following BLAST results are available for this feature:

BLAST of MELO3C026706 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068203.1	2.0e-126	100.00	hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK211...	[more]
KAE8650847.1	5.5e-71	69.46	hypothetical protein Csa_002136 [Cucumis sativus]	[more]
XP_022931103.1	8.9e-13	36.40	uncharacterized protein LOC111437389 [Cucurbita moschata]	[more]

BLAST of MELO3C026706 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DC24	9.9e-127	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LE33	3.7e-97	83.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1	[more]
A0A6J1EXF7	4.3e-13	36.40	uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]

BLAST of MELO3C026706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026706.1	MELO3C026706.1	mRNA