MELO3C026462.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C026462.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	calmodulin-like
Location	chr10: 25840203 .. 25840882 (-)
RNA-Seq Expression	MELO3C026462.jh1
Synteny	MELO3C026462.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACGATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTTT

mRNA sequence

GAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACGATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTTT

Coding sequence (CDS)

ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAATGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAA

Protein sequence

MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIMELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK

Homology

[Close]

BLAST of MELO3C026462.jh1 vs. NCBI nr
Match: KAA0065465.1 (putative calcium-binding protein CML11 [Cucumis melo var. makuwa])

HSP 1 Score: 336 bits (861), Expect = 4.15e-116
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIME 120
           HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI+E
Sbjct: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of MELO3C026462.jh1 vs. NCBI nr
Match: KAE8648233.1 (hypothetical protein Csa_018371 [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 2.31e-83
Identity = 129/155 (83.23%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 10  MAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVAHKLSLEAHI 69
           MAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VAHKL  EAHI
Sbjct: 1   MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI 60

Query: 70  QPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIMELTKAFAFLG 129
           QPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN MELTKAFAFLG
Sbjct: 61  QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG 120

Query: 130 SMFPFYKACYGMVYADANADGLISEAELDKLIDYA 164
           SMFPFYKACYGMVYADAN DGLISEAELDKLIDYA
Sbjct: 121 SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 155

[Close]

BLAST of MELO3C026462.jh1 vs. NCBI nr
Match: XP_022930007.1 (uncharacterized protein LOC111436449 [Cucurbita moschata])

HSP 1 Score: 184 bits (466), Expect = 3.20e-56
Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+D+ R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIM 120
             KLS  AH                     K+S + FSR+Q+KEIF+YHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAHP--------------------KTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462.jh1 vs. NCBI nr
Match: XP_023530717.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183 bits (464), Expect = 6.44e-56
Identity = 100/172 (58.14%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+ + R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSGIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIM 120
             KLS  AH                     K+S + FSR+Q+KEIFRYHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAHP--------------------KTSKLQFSREQMKEIFRYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462.jh1 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 182 bits (462), Expect = 1.30e-55
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+I KLQASMA YEA   IK   ++GD VQ+K FN + R+STQ+  Q +VP+IL+ + +V
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIM 120
             K S   H+                    K+SNM FSR+Q+KEIFRYHD++ DGFLNI 
Sbjct: 61  GPKFSSNTHL--------------------KASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKL+DYA K IKKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)

HSP 1 Score: 336 bits (861), Expect = 2.01e-116
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIME 120
           HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI+E
Sbjct: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 7.33e-94
Identity = 144/171 (84.21%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VA
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIME 120
           HKL  EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN ME
Sbjct: 61  HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 1.55e-56
Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+D+ R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIM 120
             KLS  AH                     K+S + FSR+Q+KEIF+YHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAHP--------------------KTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EP72 (calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1)

HSP 1 Score: 182 bits (462), Expect = 6.28e-56
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+I KLQASMA YEA   IK   ++GD VQ+K FN + R+STQ+  Q +VP+IL+ + +V
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIM 120
             K S   H+                    K+SNM FSR+Q+KEIFRYHD++ DGFLNI 
Sbjct: 61  GPKFSSNTHL--------------------KASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKL+DYA K IKKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 182 bits (462), Expect = 2.87e-55
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFND-VRSSTQIGY-QGIVPKILKSSDD 60
           M+I +LQ S A YEA   +K YE++G+ V +  FND  R STQI   + +  K LK +DD
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 61  VAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI 120
           VAHKLS  A ++   Q  GK +  I R  D K+SNM FSR+QIKEIF+Y+D++ DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 121 MELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
            E+TKAFA LGS+FPF KA +GMVYAD N DGLI E ELDKLI+YA K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

The following BLAST results are available for this feature:

BLAST of MELO3C026462.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065465.1	4.15e-116	99.42	putative calcium-binding protein CML11 [Cucumis melo var. makuwa]	[more]
KAE8648233.1	2.31e-83	83.23	hypothetical protein Csa_018371 [Cucumis sativus]	[more]
XP_022930007.1	3.20e-56	58.14	uncharacterized protein LOC111436449 [Cucurbita moschata]	[more]
XP_023530717.1	6.44e-56	58.14	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930012.1	1.30e-55	57.56	calmodulin-2/4-like [Cucurbita moschata]	[more]

BLAST of MELO3C026462.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI66	2.01e-116	99.42	Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KMQ1	7.33e-94	84.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1	[more]
A0A6J1EP67	1.55e-56	58.14	uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1EP72	6.28e-56	57.56	calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1	[more]
A0A0A0KLF3	2.87e-55	57.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1	[more]

BLAST of MELO3C026462.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 101..127 e-value: 1.9E-5 score: 24.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 96..131 score: 12.225983
None	No IPR available	GENE3D	1.10.238.10		coord: 93..169 e-value: 7.7E-9 score: 37.0
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 109..121
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 145..157
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 93..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026462.jh1.t1	MELO3C026462.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding