MELO3C026069 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026069
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr08: 10333832 .. 10334797 (+)
RNA-Seq Expression	MELO3C026069
Synteny	MELO3C026069

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTGAAAAGGAAGAAGCAAAACTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCGACCTGGGTACCTGGCCCAATTGCAATGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGGTATTAATTTCATAATGCAATTATACATATTTTTTATAATCACAATCATCAACTAATCTCCCTAAGTTACATTTGTACAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGAGGTAGCGAACGTTATGAAATGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCATACAATGGAGATCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCCGAACTACGAAGCCAATATAGGACAAAGCTTAAGCAAATCTTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATAATGTTTG

mRNA sequence

GGACTGAAAAGGAAGAAGCAAAACTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCGACCTGGGTACCTGGCCCAATTGCAATGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGAGGTAGCGAACGTTATGAAATGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCATACAATGGAGATCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCCGAACTACGAAGCCAATATAGGACAAAGCTTAAGCAAATCTTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATAATGTTTG

Coding sequence (CDS)

ATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGACAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGTAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGACCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

Protein sequence

MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

Homology

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 314.7 bits (805), Expect = 4.6e-82
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 29  HAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGK 88
           H   EMRGPSCSGFGWNEEFQCII ERDLFDSWVKSHPATKGLLHKSFPYYDDL+YVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 89  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 145
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-56
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MM +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCII ERDLFD+
Sbjct: 222 MMVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDN 281

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WVKSHP  +GLLHKSFPYYDDL+YVF KDRAT AR ETF DVGSNV NMFND +PLGDS+
Sbjct: 282 WVKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSY 341

Query: 121 DEDIPTMYSQGVHISPD 138
           D+DIP MYSQGVHISPD
Sbjct: 342 DQDIPAMYSQGVHISPD 358

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 102/160 (63.75%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CII E++LFD+
Sbjct: 51  MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDN 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+K FPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD  
Sbjct: 111 WVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG- 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           +ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 171 NEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]

BLAST of MELO3C026069 vs. NCBI nr
Match: KAA0064022.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMA+KLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+ E++LFD+
Sbjct: 51  MMAKKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDN 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+KSFPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD  
Sbjct: 111 WVRSHPAAKGLLNKSFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG- 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           +ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 171 NEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]

BLAST of MELO3C026069 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]

BLAST of MELO3C026069 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDS
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           W+KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           DEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]

BLAST of MELO3C026069 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.3e-61
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 29  HAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGK 88
           H   EMRGPSCSGFGWNEEFQCII ERDLFDSWVKSHPATKGLLHKSFPYYDDL+YVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 89  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 145
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]

BLAST of MELO3C026069 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MM +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCII ERDLFD+
Sbjct: 222 MMVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDN 281

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WVKSHP  +GLLHKSFPYYDDL+YVF KDRAT AR ETF DVGSNV NMFND +PLGDS+
Sbjct: 282 WVKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSY 341

Query: 121 DEDIPTMYSQGVHISPD 138
           D+DIP MYSQGVHISPD
Sbjct: 342 DQDIPAMYSQGVHISPD 358

[Close]

BLAST of MELO3C026069 vs. ExPASy TrEMBL
Match: A0A5A7V6Q9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00200 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.3e-53
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 1   MMAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDS 60
           MMA+KLPG  ++A+  IDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+ E++LFD+
Sbjct: 51  MMAKKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDN 110

Query: 61  WVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSH 120
           WV+SHPA KGLL+KSFPYYD+LTYVFG+DRATG  +ETF DVGSN P    D   +GD  
Sbjct: 111 WVRSHPAAKGLLNKSFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG- 170

Query: 121 DEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 161
           +ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 171 NEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]

BLAST of MELO3C026069 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 32/125 (25.60%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 20  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYY 79
           R+K LK  Y +  +++  S SGFGW+   +      +++  ++K+HP  K L + +F ++
Sbjct: 73  RMKYLKIQYQSCLDLQRFS-SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFF 132

Query: 80  DDLTYVFGKDRATGARSETFVD--------VGSNVPNMFNDTIPLGDSHDEDIPTMYSQG 137
           D+L  +FG+  ATG  +    D         G N    + D     + ++ D  T +   
Sbjct: 133 DELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVD--DFDNVYEYDTTTHHESS 192

[Close]

BLAST of MELO3C026069 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 8.9e-07
Identity = 20/74 (27.03%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 20  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYY 79
           R K L++ Y+ I  +     +GF W+     +I + D++++++++HP  +    K+ P Y
Sbjct: 381 RYKHLRRLYNDIKFLL--EQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSY 440

Query: 80  DDLTYVFGKDRATG 94
            +L ++FGK+ + G
Sbjct: 441 PNLCFIFGKETSDG 452

[Close]

BLAST of MELO3C026069 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 18/65 (27.69%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 41  GFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFV 100
           GF W++  Q ++ +  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESI 147

Query: 101 DVGSN 106
             G +
Sbjct: 148 SEGES 151

[Close]

BLAST of MELO3C026069 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 18/65 (27.69%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 41  GFGWNEEFQCIIVERDLFDSWVKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFV 100
           GF W++  Q ++ +  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESI 147

Query: 101 DVGSN 106
             G +
Sbjct: 148 SEGES 151

The following BLAST results are available for this feature:

BLAST of MELO3C026069 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	4.6e-82	92.50	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0062747.1	1.3e-60	95.69	retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p...	[more]
KAA0043564.1	7.4e-56	76.64	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0066208.1	1.3e-52	63.75	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0064022.1	1.3e-52	63.13	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C026069 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026069 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	2.2e-82	92.50	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	2.2e-82	92.50	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5D3DG22	6.3e-61	95.69	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJS2	3.6e-56	76.64	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V6Q9	6.3e-53	63.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C026069 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27260.1	1.4e-07	25.60	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	8.9e-07	27.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	1.8e-04	27.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.8e-04	27.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..109
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026069.1	MELO3C026069.1	mRNA