MELO3C025955 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025955
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr11: 13657044 .. 13658664 (-)
RNA-Seq Expression	MELO3C025955
Synteny	MELO3C025955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTACTGTAATTTCTTGAAAGAGAGAAAGGCAGTAGAGAGAGAAAGGAATTGAGTTACTCAATTCCAGAATGTACCCCTTATCAAAATCTAAATAGAAGAGAAAATTCATACCAAAAGGTGGTGTTCCATCAAATTGGTATCAGAGCGGTGAATCTTGGGAAGGAAATCAACAATGGAGCAAACGCAAATTGAAGAAAAACTGGAAGCCTTTGAACAAGAAGTGATTGGGATGAAGAAAGAATTAAGCAAAATTCCGGCAATTGAAGAAAACCTGAGATCCTTAACAAAGAGCCTCCGGCTGTTAAGAATTCAAGCCGAAAAAAATCAACAATTGTTGTTACAATGCGTTGAAACCATGGTGAAAGAAAAATTGATAGTGAGTGAACAAACAGTGAGTGAAAGAATCACAACGAATCTACCAGTGATGAAGAGTATAGTTGAAGGAGGAAGTACACCTATGAAAAGAATCGAGACCGAAGAACAAAAGAAGGAAATCGAAACTGAAGAGAAGGTGGGCGAAGAACAAACAAAGAAGATAGGAATTGAAGAAGATATAAGTGATCAAAACAAATTCAAGAAGGTAGAGTTACAGAGGTTTAGCGGCAAGAAGTTCGATTCATTTATTTTTTGGATCGAACGGAATTTCCAAAAATATGAACTGATCAATTCTGAGAGAGTAAACGTTGTTGTAATCAAATTCGATGGAACCACATTAGATTGGTCTCGGTCGAAGGATGAACACGATGCATTCAAGGATTGGTTGAGATTAAAACAGAGATTGTTACTTCCTTTCCAATCAGTGAGGGAAGAACTTAGCCGCGGGCGATTTCTAGCAAACAAATCGAAAATCGTGGAAGATCGGCGAGAATTACCGGCGAGACCCAAAACGAAGATCCAAGTGAAAAAAAGTTGCAGTTCGGAGACGCTGGAAGTGACTGGTTTCGATGGAAAAAAAAGACACCGGAAGTTGACTGGTTTCGATGAAAAAAGAAGACGGCAGCAGTCGTGTGGATGAGAAGGAGGAAGAAAATGCTGGCAAATAGTGGTTGTCCGAGAAGGCGATACGGAAAGCGGGAGAGTTGCGTAAAGAAGGAGATGTTGCCGTGATGCTGATGACGTGGCAGAAAGGGATAGAAAAGGAGGTTAGAGGAAAGAAAACTAAACCCTAAAATTGTCGATAACAAACCAAAAAAAAAAAAAAGGAAAGAAAGCTGTAAACACACCTTGAGGACAAGGTGAATCTGAAAGGGGGGAGTAATGATAGACCCCTAATTAGATTTGTTTACAGCAGAAGGAAAAGTTAGTTATACCAGCTAGAGTTTGTTACATTAGTTTGTTATGTTAGTTGTAATAACACTCACATGTGAGTTAGTTAGAGGCTGGCAAGATTAGTATAAATACTAATAGAATTTAGGAGGAAGGATATGAGAATTTTGTAAGAAGATTTACTGTAATTTCTTGAAAGAGAGAAAGGCAGTAGAGAGAGAAAGGAATTGAGTTACTCAATTCCAGAACGTACCCCTTATCAAAATCTAAATAGAAGAGGAAATTCATACCAAAAGGTGGTGTTCCATCACTCAATTCCTTTGCAGAGAAGACAACAGTTCTTGATGTATAA

mRNA sequence

GATTTACTGTAATTTCTTGAAAGAGAGAAAGGCAGTAGAGAGAGAAAGGAATTGAGTTACTCAATTCCAGAATGTACCCCTTATCAAAATCTAAATAGAAGAGAAAATTCATACCAAAAGGTGGTGTTCCATCAAATTGGTATCAGAGCGGTGAATCTTGGGAAGGAAATCAACAATGGAGCAAACGCAAATTGAAGAAAAACTGGAAGCCTTTGAACAAGAAGTGATTGGGATGAAGAAAGAATTAAGCAAAATTCCGGCAATTGAAGAAAACCTGAGATCCTTAACAAAGAGCCTCCGGCTGTTAAGAATTCAAGCCGAAAAAAATCAACAATTGTTGTTACAATGCGTTGAAACCATGGTGAAAGAAAAATTGATAGTGAGTGAACAAACAGTGAGTGAAAGAATCACAACGAATCTACCAGTGATGAAGAGTATAGTTGAAGGAGGAAAGAAGACAACAGTTCTTGATGTATAA

Coding sequence (CDS)

ATGGAGCAAACGCAAATTGAAGAAAAACTGGAAGCCTTTGAACAAGAAGTGATTGGGATGAAGAAAGAATTAAGCAAAATTCCGGCAATTGAAGAAAACCTGAGATCCTTAACAAAGAGCCTCCGGCTGTTAAGAATTCAAGCCGAAAAAAATCAACAATTGTTGTTACAATGCGTTGAAACCATGGTGAAAGAAAAATTGATAGTGAGTGAACAAACAGTGAGTGAAAGAATCACAACGAATCTACCAGTGATGAAGAGTATAGTTGAAGGAGGAAAGAAGACAACAGTTCTTGATGTATAA

Protein sequence

MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVETMVKEKLIVSEQTVSERITTNLPVMKSIVEGGKKTTVLDV

Homology

[Close]

BLAST of MELO3C025955 vs. NCBI nr
Match: KAA0052318.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. NCBI nr
Match: KAA0040878.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. NCBI nr
Match: KAA0036966.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. NCBI nr
Match: TYK17134.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. NCBI nr
Match: KAA0033099.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.9e-35
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEA EQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEACEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. ExPASy TrEMBL
Match: A0A5A7UAS4 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001550 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.8e-37
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. ExPASy TrEMBL
Match: A0A5A7T4B7 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00470 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.4e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. ExPASy TrEMBL
Match: A0A5A7TD50 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00350 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.4e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. ExPASy TrEMBL
Match: A0A5D3D1N1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00730 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.4e-36
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

[Close]

BLAST of MELO3C025955 vs. ExPASy TrEMBL
Match: A0A5A7SV91 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G002310 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MEQTQIEEKLEAFEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60
          MEQTQIEEKLEA EQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE
Sbjct: 1  MEQTQIEEKLEACEQEVIGMKKELSKIPAIEENLRSLTKSLRLLRIQAEKNQQLLLQCVE 60

Query: 61 TMVKEKLIVSEQTVSERITTNLPVMKSIVEGG 93
          TMVKEK IVSEQTVSERITTNLPVMKSIVEGG
Sbjct: 61 TMVKEKSIVSEQTVSERITTNLPVMKSIVEGG 92

The following BLAST results are available for this feature:

BLAST of MELO3C025955 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C025955 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052318.1	1.4e-36	100.00	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0040878.1	7.0e-36	98.91	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0036966.1	7.0e-36	98.91	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa]	[more]
TYK17134.1	7.0e-36	98.91	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0033099.1	5.9e-35	97.83	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C025955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAS4	6.8e-37	100.00	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7T4B7	3.4e-36	98.91	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7TD50	3.4e-36	98.91	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3D1N1	3.4e-36	98.91	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SV91	2.8e-35	97.83	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of MELO3C025955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025955.1	MELO3C025955.1	mRNA