MELO3C025902 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025902
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Kinesin-like protein KIN12B
Location	chr11: 20106300 .. 20107379 (-)
RNA-Seq Expression	MELO3C025902
Synteny	MELO3C025902

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACAAAATCCCTCCCTTTACATCTTCTCTCAGGTTTCAATTTTCTTCCCCATCCTTCTTCTCTAACGACTAACTCTCTCTCTCTCTACTTTCTCTCCCTCTCTCCCCTTCTCTCTTGCTCTCTTGTCTTCTTAGTCTTCCTCTGAATCTTCACTTTTCCTATCTCTCAATTTCCACTTCTCTAAAATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAAGTTGAAGGAGCCCAATTCCGCCTAGGCCTCCCTCTTCTAACCCACTTAAGCGGAAGCTTATTATGGAGACCGTTATTGAGAATTTCATTCCTAGGTTGTTTGATTCTGGTGGGAAGGTACTTTACGTGGTGTGATTACGGGGTTTTGGTTTATTTTTGTCTTAATTTGGGTGGTGGAACGACAGTTCTAGTTTTAGATTCAAGTTTGGAATTTTTGCCTAATGTGAATTCTGTCTGTGATTTTCAGGTGGTAGTGCACTTGAGGTCACTGTTCAAGGACGAAGATGAAGGGGATAATATAATACAGAATTTATCGGTGATCCTTTCTCAATTAATGGGCAGACACTGTTGATGCTGTTGCTGACACAGAGGCAACACATGCTTGATCTCTAATGAAACTCTGTTGTAGTTCTTTGATGACATCGGATGATATGGGAGGGCGAATGTTTACCCGTTGTCTATTCTGTTTGCAGCTTGATATCTTCCAACTTGTAGCAGGCGTTTACTTTTGATGTTGTTGCTGACACAGAGGCAACACAGGCATGATCTCTAGTGAACTCTATTGTAGCTCTTTGATGGACATCGGATGATATGGGAGGGTGAATGTTTAACTTTTGTCTATTATGTTTTCAGCTTGATATCTTCCAGCTTGTAGGAGAGCCTTTTGTTGAAAATTGTATGGCAGGTTTC

mRNA sequence

ATAACAAAATCCCTCCCTTTACATCTTCTCTCAGGTTTCAATTTTCTTCCCCATCCTTCTTCTCTAACGACTAACTCTCTCTCTCTCTACTTTCTCTCCCTCTCTCCCCTTCTCTCTTGCTCTCTTGTCTTCTTAGTCTTCCTCTGAATCTTCACTTTTCCTATCTCTCAATTTCCACTTCTCTAAAATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAAGTTGAAGGAGCCCAATTCCGCCTAGGCCTCCCTCTTCTAACCCACTTAAGCGGAAGCTTATTATGGAGACCGTTATTGAGAATTTCATTCCTAGGTGGTAGTGCACTTGAGGTCACTGTTCAAGGACGAAGATGAAGGGGATAATATAATACAGAATTTATCGGTGATCCTTTCTCAATTAATGGGCAGACACTGTTGATGCTGTTGCTGACACAGAGGCAACACATGCTTGATCTCTAATGAAACTCTGTTGTAGTTCTTTGATGACATCGGATGATATGGGAGGGCGAATGTTTACCCGTTGTCTATTCTGTTTGCAGCTTGATATCTTCCAACTTGTAGCAGGCGTTTACTTTTGATGTTGTTGCTGACACAGAGGCAACACAGGCATGATCTCTAGTGAACTCTATTGTAGCTCTTTGATGGACATCGGATGATATGGGAGGGTGAATGTTTAACTTTTGTCTATTATGTTTTCAGCTTGATATCTTCCAGCTTGTAGGAGAGCCTTTTGTTGAAAATTGTATGGCAGGTTTC

Coding sequence (CDS)

ATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAA

Protein sequence

MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTVRSQLHGSRFQTLVG

Homology

[Close]

BLAST of MELO3C025902 vs. NCBI nr
Match: KAA0061886.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK15371.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 9.1e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. NCBI nr
Match: KAA0056388.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK29130.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTV 54
          MKR+QETLSCEL DT+L DP PSSSPSPN  GIKGGRP +KPKSSFERKCSTV
Sbjct: 1  MKRTQETLSCELRDTYLADPLPSSSPSPNSIGIKGGRPFQKPKSSFERKCSTV 53

[Close]

BLAST of MELO3C025902 vs. NCBI nr
Match: KAA0067652.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 4.5e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. NCBI nr
Match: TYK23655.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 4.5e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. NCBI nr
Match: XP_008439062.1 (PREDICTED: kinesin-like protein KIN12B [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 4.5e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. ExPASy TrEMBL
Match: A0A5D3CU25 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00020 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.4e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. ExPASy TrEMBL
Match: A0A5A7UMR4 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002720 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTV 54
          MKR+QETLSCEL DT+L DP PSSSPSPN  GIKGGRP +KPKSSFERKCSTV
Sbjct: 1  MKRTQETLSCELRDTYLADPLPSSSPSPNSIGIKGGRPFQKPKSSFERKCSTV 53

[Close]

BLAST of MELO3C025902 vs. ExPASy TrEMBL
Match: A0A5A7VH00 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold70G00190 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. ExPASy TrEMBL
Match: A0A5D3DJ90 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00200 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]

BLAST of MELO3C025902 vs. ExPASy TrEMBL
Match: A0A1S3AXT5 (kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

The following BLAST results are available for this feature:

BLAST of MELO3C025902 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C025902 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061886.1	9.1e-16	100.00	kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK15371.1 kinesin-like ...	[more]
KAA0056388.1	3.8e-14	83.02	kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK29130.1 kinesin-like ...	[more]
KAA0067652.1	4.5e-07	73.33	kinesin-like protein KIN12B [Cucumis melo var. makuwa]	[more]
TYK23655.1	4.5e-07	73.33	kinesin-like protein KIN12B [Cucumis melo var. makuwa]	[more]
XP_008439062.1	4.5e-07	73.33	PREDICTED: kinesin-like protein KIN12B [Cucumis melo]	[more]

BLAST of MELO3C025902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU25	4.4e-16	100.00	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7UMR4	1.9e-14	83.02	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7VH00	2.2e-07	73.33	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DJ90	2.2e-07	73.33	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AXT5	2.2e-07	73.33	kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1	[more]

BLAST of MELO3C025902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025902.1	MELO3C025902.1	mRNA