MELO3C025837.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025837.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr04: 17735952 .. 17744023 (-)
RNA-Seq Expression	MELO3C025837.jh1
Synteny	MELO3C025837.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGCTTTATGAAGCATCAAAGATTGGGTGTATACAAATATTGAAAACTCTCATTCAAGACGATCCAGATTTCATTCAAAAAGCTTTGATGTATACAACTTCCATTACGATTGAGACTCCATTATTACACGTCTCCGTTTCTCATGGCCACCTTGAATTCACTCAGTTGCTTTTGGATCACAACCCTCAACTTGCTGAAGTTGATGCCTTTCAAAGAACTCAACTTCACATAGCTTGTTCAAATAATGGGGATATGAAGATCATTAAAGCTTTGTTGGAGAAGAACACAAGTACTGCTTGCTTGGTTCAAGATCTTAATGGCTTCATTCCTCTTCATTACGCAGTGATTAGTGAGAATATTGAGATGATGGACTTGTTGATAAAAACAAGGCCACAATCTGTTTTGATGAAGCTTAAAAATGGTCAAACTGTTTTACATTTATGTGCGGAAGGTAACCATCTACAGGGAATGAAGCTGCTAATTGCTTAAACATTATTAATTGATAAAGAGTTTCTCAACATAGTGGATGATGAGGGCAATACTATTTTGGATTTGTCTTTCATGTTACGACGAATTGAGGTAAAGTAATTATTAATTAATTATATCGATTATAAAACCAATAGTTAGAAATTAATTAAGCTAGATTCATACATGAATTCAAAATTTCTTGGTACATGGTAGTTAGCTGTGTACTCAATTATAATTAAATGGATTATTTCCTAATTTGTACTTAGGCTATGACAAGCCAATTATTGAAGTAAGTAGAAGGATAGTCAAAGGAACAATTTTACGAGATTTAAGGATGTTTGGCCCAACTTTATAGATCACTTCGCACGATAGTAAAAAAACTCATAGACTCAGACTCTTTATAATTTAGGTAGGATATGTTATATTCCTCTAGTTACCATTTGGTTTTCTCGGATAGAAGTTCAGAGCCAATACATAAATTCCAATGGGTCAGTCCAAAATGAAATTGAGACCCGATAAGAATGGTGTGCTCAAAAATGATAAATGGTGTGTTAAAAAATGATACCGTCTTGTGGAGACATATTGAAATTCCCACATTGAAATAACCAGAAAACTCAAACTTTTTTTGTTTTTTACTATTTTCTATCCAAAATAAAATAGTTTGTATCCCAAACACAATAAGCTATCATAAATGATACAATCACTCCTTCACCCTTAGAGAAAGTCATTTTCAAACAACTAGATGATACATAATTTTTTTACTTTTACAGATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGGTGTCTTTCTTAGCATCGATGAGTTTGATGTTGATGATCGTTAGCCGATTTCTGTTACAAAATAGGATTTGTAGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGTATTTGCTTGGAGTTAAAATGGTTAACCTCATGTCATTTAGTGATTATATAGAGATCAATCCATATGACAATGCATTTCCTGAAACAATTATGTGTTGTCTTGGGGTGGTTGGAATGGTTGGCTTATGGCAACTTACTCACTTTCTCAAGTCCTTATTTCACATTTTCACCTCTAAGCTCAAATCTCTCGCAACTTCAAGGTAAACTCAACAATAATACGTTCTTCCAATCCACTATTTAGTTAAAGAAGGGGTAAGTAAGTATATTAATTATTATAGCTTCTAGTGTGCGTGTGTTTCACTTATTTAATTATATTTTTACCTGTACACACTGCAATGATTTAATTTTACATGTATGTTAATTTGAATAATGTCTGTATATGTGTATGTTATTGATCCCATTTCTGTGTGTTGGATATAGTGGTTCTCTAATACACTCTATAGTGGTGATTTGACATTGAAATGGTGTACATTTGCGATAAATTGAATGTTTAATTAGTCTATGATTTTGAAAAATTCAGAATGTAATCTTTATGGTTTGATGTAACGACTTTGTTTAAAAGCAACCGTGGGTAAATTTTAAAACTCAGAGGACCAAATTTTAATTTAACTTAACACTTCCATTTTAAACAGGAATATGGAGAAAAGTTGATGCTTGTCGTAATTTTGGCACAGTCTGAAGAAACAATAATTGGGACATGA

mRNA sequence

ATGAGAAAGCTTTATGAAGCATCAAAGATTGGGTGTATACAAATATTGAAAACTCTCATTCAAGACGATCCAGATTTCATTCAAAAAGCTTTGATGTATACAACTTCCATTACGATTGAGACTCCATTATTACACGTCTCCGTTTCTCATGGCCACCTTGAATTCACTCAGTTGCTTTTGGATCACAACCCTCAACTTGCTGAAGTTGATGCCTTTCAAAGAACTCAACTTCACATAGCTTGTTCAAATAATGGGGATATGAAGATCATTAAAGCTTTGTTGGAGAAGAACACAAGTACTGCTTGCTTGGTTCAAGATCTTAATGGCTTCATTCCTCTTCATTACGCAGTGATTAGTGAGAATATTGAGATGATGGACTTGTTGATAAAAACAAGGCCACAATCTGTTTTGATGAAGCTTAAAAATGGTCAAACTGTTTTACATTTATGTGCGGAAGAGTTTCTCAACATAGTGGATGATGAGGGCAATACTATTTTGGATTTGTCTTTCATGTTACGACGAATTGAGATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGAATATGGAGAAAAGTTGATGCTTGTCGTAATTTTGGCACAGTCTGAAGAAACAATAATTGGGACATGA

Coding sequence (CDS)

ATGAGAAAGCTTTATGAAGCATCAAAGATTGGGTGTATACAAATATTGAAAACTCTCATTCAAGACGATCCAGATTTCATTCAAAAAGCTTTGATGTATACAACTTCCATTACGATTGAGACTCCATTATTACACGTCTCCGTTTCTCATGGCCACCTTGAATTCACTCAGTTGCTTTTGGATCACAACCCTCAACTTGCTGAAGTTGATGCCTTTCAAAGAACTCAACTTCACATAGCTTGTTCAAATAATGGGGATATGAAGATCATTAAAGCTTTGTTGGAGAAGAACACAAGTACTGCTTGCTTGGTTCAAGATCTTAATGGCTTCATTCCTCTTCATTACGCAGTGATTAGTGAGAATATTGAGATGATGGACTTGTTGATAAAAACAAGGCCACAATCTGTTTTGATGAAGCTTAAAAATGGTCAAACTGTTTTACATTTATGTGCGGAAGAGTTTCTCAACATAGTGGATGATGAGGGCAATACTATTTTGGATTTGTCTTTCATGTTACGACGAATTGAGATGGTAGGATATTTTCTCACAATTCCAGAAATAAAAACTAGAGCATTCATAGACGATCGTAGTGCATCCTCAAACAATACAAAAGAAAGTGTAAAATCCCGAAAGTTCACAAAAAGAAGAAACTCCAAAAGAAAAAGACGAGAATCTATGGCATTGTACACCAAAAAGACGACAGGGCAATGGAAGATATGGAGGAAGAAGAATTTAAAGTACAAAGGGAATTGGATTGAAGAGGTGCAAGTCACAATGATGCTAGTCGCTACCGTGATCGCAACCGTAACTTTTCAAGCTGGAGTTAACCATCCAGGCGGTGTCTGGCAACAAGATACTTCATTCAGTTATACGAGCTTTGAGAAGAATAGTACACATACTGGGATGGGATTATATAGCAGTTTAAGTGACTACAATAACAGAACTGTTGTTTTACCAGCTGGAACTTCAATAATGGTTTACCAACAAGAGGAAGAGTACTGGATATACTTATGGATTAACACGTTGCCTATTGACCTTAGCGACGTGCATAGCGGTGGTATCCTTAGCAATTGGGAATATGGAGAAAAGTTGATGCTTGTCGTAATTTTGGCACAGTCTGAAGAAACAATAATTGGGACATGA

Protein sequence

MRKLYEASKIGCIQILKTLIQDDPDFIQKALMYTTSITIETPLLHVSVSHGHLEFTQLLLDHNPQLAEVDAFQRTQLHIACSNNGDMKIIKALLEKNTSTACLVQDLNGFIPLHYAVISENIEMMDLLIKTRPQSVLMKLKNGQTVLHLCAEEFLNIVDDEGNTILDLSFMLRRIEMVGYFLTIPEIKTRAFIDDRSASSNNTKESVKSRKFTKRRNSKRKRRESMALYTKKTTGQWKIWRKKNLKYKGNWIEEVQVTMMLVATVIATVTFQAGVNHPGGVWQQDTSFSYTSFEKNSTHTGMGLYSSLSDYNNRTVVLPAGTSIMVYQQEEEYWIYLWINTLPIDLSDVHSGGILSNWEYGEKLMLVVILAQSEETIIGT

Homology

[Close]

BLAST of MELO3C025837.jh1 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. NCBI nr
Match: TYK13925.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. NCBI nr
Match: TYK13816.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 209  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 268

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 269  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 328

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 329  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 388

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 389  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 448

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 449  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 508

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 509  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 568

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 569  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 628

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 629  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 688

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 689  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 748

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 749  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 808

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 809  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 868

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 869  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 928

[Close]

BLAST of MELO3C025837.jh1 vs. NCBI nr
Match: KAA0031444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.1e-119
Identity = 282/891 (31.65%), Postives = 417/891 (46.80%), Query Frame = 0


Query: 71   HLNFHGLRLLARKNMVKGLPYIKHPD-QLCEGCLHGKQSRKSFPQESSSRARRPLELVHT 130
            H++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q SS R    L+LV++
Sbjct: 431  HMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QTSSERKLNILDLVYS 490

Query: 131  DLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKA 190
            D+CGP++  S G N YF+ FIDD S+K WVY +K K +VF +F++F ALVE+E+G  +K 
Sbjct: 491  DVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKR 550

Query: 191  LRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMP 250
            LRSD GGE+T  EF+ +C+ +GIR   TVP TPQ NGV ER NRTI+   RSML+  K+P
Sbjct: 551  LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 610

Query: 251  KEFWAQAVECAVYLSNRSPTKSLWNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSK 310
            K FW +AV+ A YL NRSP+  L  +  ++ WT ++ S  H +VF C A+AH+P ++R+K
Sbjct: 611  KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTK 670

Query: 311  LDDKSEKYVFVGYDASSKGYKLYNPVTKKTIDSEPLNFEE------ASQNDKWK------ 370
            LDDKS   +F+GY     GY+L++PV KK I S  + F E      A  ++K K      
Sbjct: 671  LDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPN 730

Query: 371  ------------------------------------------------------------ 430
                                                                        
Sbjct: 731  FVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRR 790

Query: 431  -----------------------------------------IAMDEEIKVIKKNDTWELS 490
                                                      AM EE++ ++KN T++L 
Sbjct: 791  SERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLV 850

Query: 491  TLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDYDEVFAPVAGLETIRL 550
             LP GK+ +  KWVFK+K++   ++ +YKARLV KG+ Q+KGID+DE+F+PV  + +IR 
Sbjct: 851  ELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRT 910

Query: 551  LIVLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYELKQA 610
            ++ LAA  + ++ Q+DVK+ FL+G LEEE+Y+EQP G+ V G++  V KL K+LY LKQA
Sbjct: 911  ILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQA 970

Query: 611  PRIWNSRINKYFLDNGYLRCPYEHSLYIK-------------VNDILF------------ 670
            PR W  + + +     YL+   +  +Y K             V+D+L             
Sbjct: 971  PRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLK 1030

Query: 671  ------------------------------------------------------------ 690
                                                                        
Sbjct: 1031 GDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLA 1090

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 333.6 bits (854), Expect = 9.0e-90
Identity = 264/968 (27.27%), Postives = 384/968 (39.67%), Query Frame = 0


Query: 71   HLNFHGLRLLARKNMVKGLPYIKHPD---QLCEGCLHGKQSRKSFPQ-ESSSRARRPLEL 130
            H++   L  + RKNM      + + +   ++CE CL+GKQ+R  F Q +  +  +RPL +
Sbjct: 424  HISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFV 483

Query: 131  VHTDLCGPIKPSSFGKNNYFLFFIDDFSQKTWVYFVKEKSEVFGMFKRFKALVEKESGYY 190
            VH+D+CGPI P +    NYF+ F+D F+     Y +K KS+VF MF+ F A  E      
Sbjct: 484  VHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLK 543

Query: 191  IKALRSDMGGEFTKNEFKTFCAENGIRRPMTVPFTPQQNGVVERKNRTILNMARSMLKCK 250
            +  L  D G E+  NE + FC + GI   +TVP TPQ NGV ER  RTI   AR+M+   
Sbjct: 544  VVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGA 603

Query: 251  KMPKEFWAQAVECAVYLSNRSPTKSL--WNKTSQQAWTGRKPSIGHFRVFRCMAYAHIPD 310
            K+ K FW +AV  A YL NR P+++L   +KT  + W  +KP + H RVF    Y HI +
Sbjct: 604  KLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN 663

Query: 311  QKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTI------------------------ 370
             K+ K DDKS K +FVGY+ +  G+KL++ V +K I                        
Sbjct: 664  -KQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVF 723

Query: 371  -----------------------------------------DSEPLNF------------ 430
                                                     +SE  NF            
Sbjct: 724  LKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEF 783

Query: 431  ------------------------------------------------------------ 490
                                                                        
Sbjct: 784  PNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEI 843

Query: 491  --EEASQND--------------------------------------------------- 550
              +  ++ND                                                   
Sbjct: 844  GIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYR 903

Query: 551  ----KWKIAMDEEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVG 610
                 W+ A++ E+   K N+TW ++  P  K  V  +WVF +K NE G   +YKARLV 
Sbjct: 904  DDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVA 963

Query: 611  KGYSQRKGIDYDEVFAPVAGLETIRLLIVLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQ 670
            +G++Q+  IDY+E FAPVA + + R ++ L  Q N K+ QMDVK+ FLNG L+EE+Y+  
Sbjct: 964  RGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRL 1023

Query: 671  PPGYSVKGQEDKVLKLKKALYELKQAPRIW--------------NSRINK--YFLDNG-- 686
            P G S     D V KL KA+Y LKQA R W              NS +++  Y LD G  
Sbjct: 1024 PQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNI 1083

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-74
Identity = 235/956 (24.58%), Postives = 340/956 (35.56%), Query Frame = 0


Query: 99   CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLFFIDDFSQKT 158
            C  C   K  +  F   S+  + +PLE +++D+   PI   S     Y++ F+D F++ T
Sbjct: 479  CSDCFINKSHKVPF-SNSTITSSKPLEYIYSDVWSSPI--LSIDNYRYYVIFVDHFTRYT 538

Query: 159  WVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMT 218
            W+Y +K+KS+V   F  FK+LVE      I  L SD GGEF     + + +++GI    +
Sbjct: 539  WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTS 598

Query: 219  VPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTS 278
             P TP+ NG+ ERK+R I+ M  ++L    +PK +W  A   AVYL NR PT  L  ++ 
Sbjct: 599  PPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSP 658

Query: 279  QQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY-------- 338
             Q   G+ P+    +VF C  Y  +    R KL+DKS++  F+GY  +   Y        
Sbjct: 659  FQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTG 718

Query: 339  ------------------------------------------------------------ 398
                                                                        
Sbjct: 719  RLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPH 778

Query: 399  ------------------------------------------------------------ 458
                                                                        
Sbjct: 779  LDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSN 838

Query: 459  ------------------------------------------------------------ 518
                                                                        
Sbjct: 839  SPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVL 898

Query: 519  -------------------------------KLYNPVTKKTIDSEPLNFEEASQNDKWKI 578
                                           + Y+  T    +SEP    +A ++D+W+ 
Sbjct: 899  PAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQ 958

Query: 579  AMDEEIKVIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRK 638
            AM  EI     N TW+L    P     VG +W+F  K N  G + +YKARLV KGY+QR 
Sbjct: 959  AMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRP 1018

Query: 639  GIDYDEVFAPVAGLETIRLLIVLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSVK 686
            G+DY E F+PV    +IR+++ +A   +W I Q+DV + FL G L +EVY+ QPPG+  K
Sbjct: 1019 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDK 1078

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 4.1e-74
Identity = 240/952 (25.21%), Postives = 343/952 (36.03%), Query Frame = 0


Query: 99   CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLFFIDDFSQKT 158
            C  CL  K ++  F Q S+  + RPLE +++D+   PI   S     Y++ F+D F++ T
Sbjct: 500  CSDCLINKSNKVPFSQ-STINSTRPLEYIYSDVWSSPI--LSHDNYRYYVIFVDHFTRYT 559

Query: 159  WVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRPMT 218
            W+Y +K+KS+V   F  FK L+E      I    SD GGEF       + +++GI    +
Sbjct: 560  WLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTS 619

Query: 219  VPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLWNKTS 278
             P TP+ NG+ ERK+R I+    ++L    +PK +W  A   AVYL NR PT  L  ++ 
Sbjct: 620  PPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESP 679

Query: 279  QQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGY-------- 338
             Q   G  P+    RVF C  Y  +    + KLDDKS + VF+GY  +   Y        
Sbjct: 680  FQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTS 739

Query: 339  KLY--------------------------------------------------------- 398
            +LY                                                         
Sbjct: 740  RLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPH 799

Query: 399  ---------------------------------------------NPVTKKT-------- 458
                                                          P T+ T        
Sbjct: 800  HAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHS 859

Query: 459  ------------------------------------------------------------ 518
                                                                        
Sbjct: 860  SQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQ 919

Query: 519  -------------------------------------IDSEPLNFEEASQNDKWKIAMDE 578
                                                  +SEP    +A ++++W+ AM  
Sbjct: 920  IVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGS 979

Query: 579  EIKVIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 638
            EI     N TW+L    P+    VG +W+F  K N  G + +YKARLV KGY+QR G+DY
Sbjct: 980  EINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDY 1039

Query: 639  DEVFAPVAGLETIRLLIVLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSVKGQED 686
             E F+PV    +IR+++ +A   +W I Q+DV + FL G L ++VY+ QPPG+  K + +
Sbjct: 1040 AETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPN 1099

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot
Match: Q12337 (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-19
Identity = 79/313 (25.24%), Postives = 130/313 (41.53%), Query Frame = 0


Query: 55  SNTNSSRGRGRQHYS------RHLNFHGLRLLARKNMVKGLPYIKHPD--------QLCE 114
           +N N S+   +  Y        H NF  ++   +KN V    Y+K  D          C 
Sbjct: 578 NNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAV---TYLKESDIEWSNASTYQCP 637

Query: 115 GCLHGKQSRKSFPQESS---SRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDFSQKT 174
            CL GK ++    + S      +  P + +HTD+ GP+        +YF+ F D+ ++  
Sbjct: 638 DCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQ 697

Query: 175 WVYFVKEKSE--VFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIRRP 234
           WVY + ++ E  +  +F    A ++ +    +  ++ D G E+T      F    GI   
Sbjct: 698 WVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITAC 757

Query: 235 MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNR--SPTKSLW 294
            T     + +GV ER NRT+LN  R++L C  +P   W  AVE +  + N   SP K   
Sbjct: 758 YTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKK--- 817

Query: 295 NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGY----DASSKGY 343
            K+++Q        +    +   + +           D K       GY      +S GY
Sbjct: 818 RKSARQ-----HAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGY 877

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V3X9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003030 PE=4 SV=1)

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CTU3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00790 PE=4 SV=1)

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 209  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 268

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 269  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 328

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 329  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 388

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 389  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 448

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 449  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 508

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 509  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 568

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 569  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 628

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 629  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 688

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 689  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 748

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 749  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 808

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 809  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 868

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 869  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 928

[Close]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C639 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002010 PE=4 SV=1)

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 654/1136 (57.57%), Postives = 664/1136 (58.45%), Query Frame = 0


Query: 1    MTEQLFQSKLKLKDKEDRLEKGNRGRGCGGNRGRGDFKDRGRGSYGQRKFDKSNSNTNSS 60
            MTEQLFQSKLKLKDKE  LEKGNRGRG GGNRGRGDFKDRG+GSYGQRKFD+SNSN+NSS
Sbjct: 184  MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 243

Query: 61   RGRGRQHYSR-------------------------------------------------- 120
            RGRGRQHYSR                                                  
Sbjct: 244  RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 303

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 304  DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 363

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 364  GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 423

Query: 241  -------------------------------------HLNFHGLRLLARKNMVKGLPYIK 300
                                                 HLNF GLRLLARKNMVKGLPY+K
Sbjct: 424  VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 483

Query: 301  HPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLFFIDDF 360
             PDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPIKPSSFGKNNYFL FIDDF
Sbjct: 484  LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 543

Query: 361  SQKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDMGGEFTKNEFKTFCAENGIR 420
            S+KTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSD GGEFT NEFKTFC ENGIR
Sbjct: 544  SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 603

Query: 421  RPMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTKSLW 480
            R MTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPT+SLW
Sbjct: 604  RTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLW 663

Query: 481  NKTSQQAWTGRKPSIGHFRVFRCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 540
            NKT QQAWTGRKPSIGH RVF CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN
Sbjct: 664  NKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYN 723

Query: 541  PVTKKTI----------------------------------------------------- 600
            PVTKKTI                                                     
Sbjct: 724  PVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSS 783

Query: 601  ---------------------------------------DSEPLNFEEASQNDKWKIAMD 660
                                                   DSEPLNFEEASQNDKWKIAMD
Sbjct: 784  SSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMD 843

Query: 661  EEIKVIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDY 688
            EEIK IKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE+YKARLV KGYSQRKGIDY
Sbjct: 844  EEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDY 903

[Close]

BLAST of MELO3C025837.jh1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 208.8 bits (530), Expect = 2.4e-53
Identity = 134/493 (27.18%), Postives = 217/493 (44.02%), Query Frame = 0


Query: 319 FVGYDASSKGYKLYNPVTKKTIDSEPLNFEEASQNDKWKIAMDEEIKVIKKNDTWELSTL 378
           F+ Y+  S  Y  +     K    EP  + EA +   W  AMD+EI  ++   TWE+ TL
Sbjct: 63  FLSYEKVSPLYHSFLVCIAKA--KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 122

Query: 379 PNGKKAVGVKWVFKIKRNEKGEVEKYKARLVGKGYSQRKGIDYDEVFAPVAGLETIRLLI 438
           P  KK +G KWV+KIK N  G +E+YKARLV KGY+Q++GID+ E F+PV  L +++L++
Sbjct: 123 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 182

Query: 439 VLAAQNNWKIFQMDVKSTFLNGYLEEEVYLEQPPGYSVKGQE----DKVLKLKKALYELK 498
            ++A  N+ + Q+D+ + FLNG L+EE+Y++ PPGY+ +  +    + V  LKK++Y LK
Sbjct: 183 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 242

Query: 499 QAPRIWNSRINKYFLDNGYLRCPYEHSLYIKVN--------------------------- 558
           QA R W  + +   +  G+++   +H+ ++K+                            
Sbjct: 243 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 302

Query: 559 ------------------------------------------------------------ 618
                                                                       
Sbjct: 303 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 362

Query: 619 ---------------------------------DILFSVGLVSRFMESPTTTHLKVTKRI 660
                                            DI F+V  +S+F E+P   H +   +I
Sbjct: 363 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 422

[Close]

BLAST of MELO3C025837.jh1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-15
Identity = 34/87 (39.08%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 528 DILFSVGLVSRFMESPTTTHLKVTKRILRYLRGTLDYGLFYSSSKEFKLEGYYDSDWAGD 587
           DI ++V +V + M  PT     + KR+LRY++GT+ +GL+   + +  ++ + DSDWAG 
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175

Query: 588 TNDRKSTSGYVFFIGNTAFTWSSKKQP 615
           T+ R+ST+G+  F+G    +WS+K+QP
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQP 202

[Close]

BLAST of MELO3C025837.jh1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-14
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 332 YNPVTKKTIDSEPLNFEEASQNDKWKIAMDEEIKVIKKNDTWELSTLPNGKKAVGVKWVF 391
           Y+     TI  EP +   A ++  W  AM EE+  + +N TW L   P  +  +G KWVF
Sbjct: 16  YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVF 75

Query: 392 KIKRNEKGEVEKYKARLVGKGYSQRKGIDYDEVFAPVAGLETIRLLIVLAAQ 444
           K K +  G +++ KARLV KG+ Q +GI + E ++PV    TIR ++ +A Q
Sbjct: 76  KTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of MELO3C025837.jh1 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 937  WRKKNLKYKGNWIEEVQVTMMLVATVIATVTFQAGVNHPGGVWQQDTSFSYTSFEKNSTH 996
            W  K LK +G+W+E+ +  +M+ ATVIA ++FQ  VN PGGVWQ D              
Sbjct: 18   WFVKYLKRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDN------------- 77

Query: 997  TGMGLYSSLSDYNNRTVVLP-----AGTSIMVYQQEEE--YWIYLWINTVSFLASMSLML 1056
                       + N+T   P     AGT+++ Y+  +   Y   +  +TVSF  SMSL+L
Sbjct: 78   ---------CSFGNQTGTAPFCKGRAGTAVLEYESSKRIAYIGMIISSTVSFSTSMSLIL 137

Query: 1057 MIVSRFLLQNRICSCLLTLATCIAVVSLAIGYLLGVKMV 1089
            +++S   L+NR+   +L     +AV+ ++  +   + +V
Sbjct: 138  LVISGIRLRNRMIMAILGTFMVVAVLCISAAFFFAIVLV 154

[Close]

BLAST of MELO3C025837.jh1 vs. TAIR 10
Match: AT3G09550.1 (Ankyrin repeat family protein )

HSP 1 Score: 63.9 bits (154), Expect = 9.5e-10
Identity = 105/467 (22.48%), Postives = 196/467 (41.97%), Query Frame = 0


Query: 674  EDQIADIFTKPLKVNKCHPWEEDVMRKLYEASKIGCIQILKTLIQDDPDFIQKALMYTTS 733
            +D++A I T    VN+ +   E     L+ A++ G I ++K L+   P    ++LM    
Sbjct: 125  DDEVAQIMTS--VVNEVNELGE---TPLFTAAEKGNIDVVKELL---PYTTIESLMQKNL 184

Query: 734  ITIETPLLHVSVSHGHLEFTQLLLDHNPQLAEVDAFQRTQLHIACSNNGDMKIIKALLEK 793
               +   LH++ S GH    QLLL+H PQL++  A       ++ +  G  +++  LL K
Sbjct: 185  SGFDA--LHIACSQGHRSIVQLLLEHEPQLSKTVAQSNATPLVSAATRGHSEVVNELLAK 244

Query: 794  NTSTACLVQDLNGFIPLHYAVISENIEMMDLLIKTRPQSVLMKLKNGQTVLHLCAE---- 853
            ++S   + +  NG   LH A    +++++  L+   PQ      K GQT LH+  +    
Sbjct: 245  DSSLLEISRS-NGKNALHLAARQGHVDIVRTLLDKDPQLARRTDKKGQTSLHMAVKGVSS 304

Query: 854  -----------EFLNIVDDEGNTILDLSFMLRRIEMVGYFLTIPEIKTRAFIDDRSAS-- 913
                         + + D  GNT+L ++   +R E+V   L +P+    A   D   +  
Sbjct: 305  QVVRLLLRADPAIVMLPDKFGNTVLHIATRKKRAEIVNELLQLPDTNVNALTRDHKTAYD 364

Query: 914  -------SNNTKE---------SVKSRKFTKRRNSKRKR-------RESMALYTKKTTGQ 973
                   S  T E         ++K+ +  + R+  RK          +    T+KT   
Sbjct: 365  IAEGLTHSEETAEIKEILSRCGALKANELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKN 424

Query: 974  WKIWRKKNLKYKGNWIEEVQVTMMLVATVIATVTFQAGVNHPGGVWQQDTSFSY--TSFE 1033
                 K+  K     I     ++ +VA + ATV F A    PGG      +     TSF+
Sbjct: 425  VDGIAKELRKLHRAGINNATNSVTVVAVLFATVAFAAIFTVPGGDDDHGVAVMVHATSFK 484

Query: 1034 KNSTHTGMGLYSSLSDYNNRTVVLPAGTSIMVYQQEEEYWIYLWINTVSFLASMSLMLMI 1092
                   + L++SL+       V+    +++  + + E  +   IN + +LAS+   +  
Sbjct: 485  IFFIFNAIALFTSLA-------VVVVQITLVRGETKTERRVVEVINKLMWLASVCTTVAF 544

The following BLAST results are available for this feature:

BLAST of MELO3C025837.jh1 vs. NCBI nr


Match Name	Identity	Description
TYK18362.1	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK06895.1	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK13925.1	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK13816.1	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0031444.1	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of MELO3C025837.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.1e-119	31.65	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	9.0e-90	27.27	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.4e-74	24.58	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.1e-74	25.21	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12337	2.9e-19	25.24	Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of MELO3C025837.jh1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7V3X9	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SJX6	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D497	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3CTU3	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C639	57.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of MELO3C025837.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.4e-53	27.18	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.8e-15	39.08	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	4.9e-14	37.50	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT3G13950.1	3.0e-11	30.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G09550.1	9.5e-10	22.48	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 39..68 e-value: 28.0 score: 13.6 coord: 72..102 e-value: 0.085 score: 22.0 coord: 108..138 e-value: 0.026 score: 23.7 coord: 161..190 e-value: 2900.0 score: 1.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 108..130 score: 8.68292
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 77..157 e-value: 1.1E-10 score: 42.0
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 250..292 e-value: 4.9E-11 score: 42.5
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..248 e-value: 8.6E-27 score: 96.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 4..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..224
None	No IPR available	PANTHER	PTHR24128:SF56	ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE	coord: 3..305
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 3..305
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 108..130 score: 8.667035

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025837.jh1.t2	MELO3C025837.jh1.t2	mRNA
MELO3C025837.jh1.t1	MELO3C025837.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding