Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCCTTCACCACCGAAAACTGCAACAACCACAAAGGGTAAATGCTACAAGGGTATTCCAACGAGACATTAGTTCAAGAAAATTCGTCGGTCAATAGCGGTGACTGATACAGGTCAGCACAGTGTGCATGCAAGACGATCTCCTGACCCCGTGTCCCTTGTTACTATCAAAAAGGAAGTTTCGAAGGTCTCTCCGTCGCGTACCTCTCATTCGTCTACGTCCTCTTCTATGTCGAGATCTAAGGTGTCAGTTGAGACAGTGGTGTTAGATTCTAATTTTTTTGATGGTACTGACAATGTCATTCTATCGACACTCTTTCGTTGTAAGGCTAGGTATCGAACTGATCTGTCACCCACTCCTCTTCATCTGAATCAGGTTTTGCACTCTCCATCTCGGCCTGCTTCACCCCTCAAGGATGTTCCCTCTCAAAGTATGGACTATGGTAAGTCTCAGCTGCTCCTTCATTTATCGCTTCTCCACAAGCCTCTCTTCCAACTGATGATGATGACGCAAGTGATGACACTGATAAAAATTACATTGTTGTAACTGAGGACACTCTTGCACCAAAGGAATTCACAACCTCTACTGAGGATCATATTTCACCCCCTGATAATCGAACGTCCGAACCTCAATCGACTGAAGGACCTAGTGAATCCTCCATTCTGATGTCGCCTCCCAAACACGTAGGTTCCTCCTCTAAACCACATCATCCACCTATCAAAGGACAACGCGTAATATCAACCAAGGCTTGTCCTGCCATTCTTGACTTAATTTGCAATGCTGGTCTACTTCGTACTATATTTGAGGTTGGTCTCTTCTATCCCCAACTTATCTACGAACTGGTTGTTAATCAGCCTTCTGATTTTAATGATCTGAGTGCTGAGGAATTCCACAAGGTGCATATTTGGGGTGTCTGTTTTAATGTCTCTTCTGAATTACTTCATTAATTCCTGGGCATTACTCTACCGACTAACTATGCTATTTCGTACCCCACCCCCGAGCGACTGGCTGAAGAACTTACTGGAGGAATCGTGCCTGTCTGGATAGTTGATGGACAGCTTCCTATTGCATATTTAACAGTCAAATATGCAATTCTCCATTGGATTGGTATCTCCAACTGGATTCCCTCTACTTATGCATCTACAATCTCTACTTCTCTAGGTCACTTCGTTTATCTTGTGGGCACTGAAGTCAAGGTGAATGTTGGCGAATTTATTTTTAATCACTTACTACGCCATGTTGATACGTTTGCGATTTATATTCCCATCTGTTTTCCAAGGCTTCTGAGTGGCTTTATTTTATCACAACAACCGGCTATTCTGACTCTACTTGATGTTGTTGGCACTACTCTACGCATTATTCCACTGAGTGTGCGTTTGTTTAAAGGTTTCCATATTCCAGATGTTGTTGCTGAATTTATAAATGCGCCTGGAAGGACCAGGGCTGCTGCTGCCACGCACTCTACTGTTGGTCAGCCTCTAGTCCTCTTTATCTCGCTATCCAATCGGCTGTTACAAGCATTGATGGCTGAATCTCGATCCCACACTCGCCATATCAGTAAGCTTTCTGATAGGCGAACTGTGTTGGATGCTGTTCTACGTGACCTTCGGCATGTGGCTTTAGAACCTCCGGCTTCTCCACCAGATCATCAGGAATGA
mRNA sequence
ATGGCCCCTTCACCACCGAAAACTGCAACAACCACAAAGGGTAAATGCTACAAGGGTCAGCACAGTGTGCATGCAAGACGATCTCCTGACCCCGTGTCCCTTGTTACTATCAAAAAGGAAGTTTCGAAGGTCTCTCCGTCGCGTACCTCTCATTCGTCTACGTCCTCTTCTATGTCGAGATCTAAGGTGTCAGTTGAGACAGTGGTGTTAGATTCTAATTTTTTTGATGGTACTGACAATGTCATTCTATCGACACTCTTTCGTTGTAAGGCTAGGTATCGAACTGATCTGTCACCCACTCCTCTTCATCTGAATCAGGTTTTGCACTCTCCATCTCGGCCTGCTTCACCCCTCAAGGATGTTCCCTCTCAAAGTATGGACTATGCCTCTCTTCCAACTGATGATGATGACGCAAGTGATGACACTGATAAAAATTACATTGTTGTAACTGAGGACACTCTTGCACCAAAGGAATTCACAACCTCTACTGAGGATCATATTTCACCCCCTGATAATCGAACGTCCGAACCTCAATCGACTGAAGGACCTAGTGAATCCTCCATTCTGATGTCGCCTCCCAAACACGTAGGTTCCTCCTCTAAACCACATCATCCACCTATCAAAGGACAACGCGTAATATCAACCAAGGCTTGTCCTGCCATTCTTGACTTAATTTGCAATGCTGGTCTACTTCGTACTATATTTGAGGTTGGTCTCTTCTATCCCCAACTTATCTACGAACTGGTTGTTAATCAGCCTTCTGATTTTAATGATCTGAGTGCTGAGGAATTCCACAAGCTTCCTATTGCATATTTAACAGTCAAATATGCAATTCTCCATTGGATTGGTATCTCCAACTGGATTCCCTCTACTTATGCATCTACAATCTCTACTTCTCTAGGTCACTTCGTTTATCTTGTGGGCACTGAAGTCAAGGTGAATGTTGGCGAATTTATTTTTAATCACTTACTACGCCATGTTGATACGTTTGCGATTTATATTCCCATCTGTTTTCCAAGGCTTCTGAGTGGCTTTATTTTATCACAACAACCGGCTATTCTGACTCTACTTGATGTTGTTGGCACTACTCTACGCATTATTCCACTGAGTGTGCGTTTGTTTAAAGGTTTCCATATTCCAGATGTTGTTGCTGAATTTATAAATGCGCCTGGAAGGACCAGGGCTGCTGCTGCCACGCACTCTACTGTTGGTCAGCCTCTAGTCCTCTTTATCTCGCTATCCAATCGGCTGTTACAAGCATTGATGGCTGAATCTCGATCCCACACTCGCCATATCAGTAAGCTTTCTGATAGGCGAACTGTGTTGGATGCTGTTCTACGTGACCTTCGGCATGTGGCTTTAGAACCTCCGGCTTCTCCACCAGATCATCAGGAATGA
Coding sequence (CDS)
ATGGCCCCTTCACCACCGAAAACTGCAACAACCACAAAGGGTAAATGCTACAAGGGTCAGCACAGTGTGCATGCAAGACGATCTCCTGACCCCGTGTCCCTTGTTACTATCAAAAAGGAAGTTTCGAAGGTCTCTCCGTCGCGTACCTCTCATTCGTCTACGTCCTCTTCTATGTCGAGATCTAAGGTGTCAGTTGAGACAGTGGTGTTAGATTCTAATTTTTTTGATGGTACTGACAATGTCATTCTATCGACACTCTTTCGTTGTAAGGCTAGGTATCGAACTGATCTGTCACCCACTCCTCTTCATCTGAATCAGGTTTTGCACTCTCCATCTCGGCCTGCTTCACCCCTCAAGGATGTTCCCTCTCAAAGTATGGACTATGCCTCTCTTCCAACTGATGATGATGACGCAAGTGATGACACTGATAAAAATTACATTGTTGTAACTGAGGACACTCTTGCACCAAAGGAATTCACAACCTCTACTGAGGATCATATTTCACCCCCTGATAATCGAACGTCCGAACCTCAATCGACTGAAGGACCTAGTGAATCCTCCATTCTGATGTCGCCTCCCAAACACGTAGGTTCCTCCTCTAAACCACATCATCCACCTATCAAAGGACAACGCGTAATATCAACCAAGGCTTGTCCTGCCATTCTTGACTTAATTTGCAATGCTGGTCTACTTCGTACTATATTTGAGGTTGGTCTCTTCTATCCCCAACTTATCTACGAACTGGTTGTTAATCAGCCTTCTGATTTTAATGATCTGAGTGCTGAGGAATTCCACAAGCTTCCTATTGCATATTTAACAGTCAAATATGCAATTCTCCATTGGATTGGTATCTCCAACTGGATTCCCTCTACTTATGCATCTACAATCTCTACTTCTCTAGGTCACTTCGTTTATCTTGTGGGCACTGAAGTCAAGGTGAATGTTGGCGAATTTATTTTTAATCACTTACTACGCCATGTTGATACGTTTGCGATTTATATTCCCATCTGTTTTCCAAGGCTTCTGAGTGGCTTTATTTTATCACAACAACCGGCTATTCTGACTCTACTTGATGTTGTTGGCACTACTCTACGCATTATTCCACTGAGTGTGCGTTTGTTTAAAGGTTTCCATATTCCAGATGTTGTTGCTGAATTTATAAATGCGCCTGGAAGGACCAGGGCTGCTGCTGCCACGCACTCTACTGTTGGTCAGCCTCTAGTCCTCTTTATCTCGCTATCCAATCGGCTGTTACAAGCATTGATGGCTGAATCTCGATCCCACACTCGCCATATCAGTAAGCTTTCTGATAGGCGAACTGTGTTGGATGCTGTTCTACGTGACCTTCGGCATGTGGCTTTAGAACCTCCGGCTTCTCCACCAGATCATCAGGAATGA
Protein sequence
MAPSPPKTATTTKGKCYKGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSPSRPASPLKDVPSQSMDYASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHKLPIAYLTVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPPDHQE
Homology
BLAST of MELO3C025815 vs. NCBI nr
Match:
TYK07258.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 775.0 bits (2000), Expect = 3.6e-220
Identity = 424/484 (87.60%), Postives = 426/484 (88.02%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCYKGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
MAPSPPKTATTT KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR
Sbjct: 1 MAPSPPKTATTT-----KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
Query: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSPSRPASPLKD 120
SKVSVETVVLDSNFFDGTDNVILSTLFR +PS ASP
Sbjct: 61 SKVSVETVVLDSNFFDGTDNVILSTLFR--------------------SAPSFIASP--- 120
Query: 121 VPSQSMDYASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST
Sbjct: 121 -------QASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
Query: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF
Sbjct: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
Query: 241 YPQLIYELVVNQPSDFNDLSAEEFHK-------------------LPIAYLTVKYAILHW 300
YPQLIYELVVNQPSDFNDLSAEEFHK LPIAYLTVKYAILHW
Sbjct: 241 YPQLIYELVVNQPSDFNDLSAEEFHKRLAEELTGGIVPVWIVDGQLPIAYLTVKYAILHW 300
Query: 301 IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRL 360
IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLR+VDTFAIYIPICFPRL
Sbjct: 301 IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRYVDTFAIYIPICFPRL 360
Query: 361 LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS 420
LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS
Sbjct: 361 LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS 420
Query: 421 TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP 466
TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP
Sbjct: 421 TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP 449
BLAST of MELO3C025815 vs. NCBI nr
Match:
KAA0058488.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 773.9 bits (1997), Expect = 8.1e-220
Identity = 425/493 (86.21%), Postives = 427/493 (86.61%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCYKGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
MAPSPPKTATTT KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR
Sbjct: 1 MAPSPPKTATTT-----KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
Query: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSPSRPASPLKD 120
SKVSVETVVLDSNFFDGTDNVILSTLFR A +PS ASP
Sbjct: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRFSA------------------APSFIASP--- 120
Query: 121 VPSQSMDYASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST
Sbjct: 121 -------QASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
Query: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF
Sbjct: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
Query: 241 YPQLIYELVVNQPSDFNDLSAEEFHK----------------------------LPIAYL 300
YPQLIYELVVNQPSDFNDLSAEEFHK LPIAYL
Sbjct: 241 YPQLIYELVVNQPSDFNDLSAEEFHKVHIWGVCFNRLAEELTGGIVPVWIVDGQLPIAYL 300
Query: 301 TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAI 360
TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLR+VDTFAI
Sbjct: 301 TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRYVDTFAI 360
Query: 361 YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR 420
YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR
Sbjct: 361 YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR 420
Query: 421 TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV 466
TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV
Sbjct: 421 TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV 460
BLAST of MELO3C025815 vs. NCBI nr
Match:
KAA0062468.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 466.1 bits (1198), Expect = 3.6e-127
Identity = 285/514 (55.45%), Postives = 334/514 (64.98%), Query Frame = 0
Query: 1 MAPSPPKT-ATTTKGKCYKGQH--------SVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPS PK+ + +G H S H RR D V VTIKKEV +VSP T H
Sbjct: 485 MAPSSPKSKVRRSVAAIIEGLHSPLTSPIRSSHVRRPSDLVFPVTIKKEVPEVSPPHTFH 544
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
SSSM +K SVETVVLDS+ D +NV+LSTL KAR+ + S TPL SP
Sbjct: 545 PFVSSSMPATKTSVETVVLDSDSSDSDNNVVLSTLLHHKARHHNNESLTPLQPRPTSSSP 604
Query: 121 SRPASPLKDVPSQSMDYA-----------SLPTDDDDASDDTDKNYIVVTEDTLAPKEFT 180
R AS K+VP ++ D SLPTD DDASD+TD++Y++ TE+T P+E +
Sbjct: 605 PRDASLSKEVPPRTTDQGKSSAAPSYLPDSLPTDVDDASDETDEDYVLGTEETTVPEETS 664
Query: 181 TSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA--- 240
TS+E +S +NR EP+S EG ESSI MSPP+HVGSSS P PP+KG RVISTKA
Sbjct: 665 TSSEASVSSSENRPLEPRSPEGSRESSIPMSPPRHVGSSSGPRRPPVKGHRVISTKADQR 724
Query: 241 ---------------------------------------------CPAILDLICNAGLLR 300
CP IL+LI AGL
Sbjct: 725 KIPLNVPSFLIDGVSFHSEEDAHKWKYVVKRRIADEANISDQYNLCPTILELIRMAGLTH 784
Query: 301 TIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHKLPIAYLTVKYAILHWIGISNWIPSTY 360
T+ EVG FYP+LI EL+VN PSDFND S +E+HKL +A LTVKYAILH IGISNWI TY
Sbjct: 785 TMSEVGPFYPRLICELIVNLPSDFNDPSVKEYHKLSVASLTVKYAILHRIGISNWISCTY 844
Query: 361 ASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLSGFILSQQPA 420
ASTISTSLGHFVYL+G VKVNVGE IFNHLLRHV+TFAI+IPI FPR+LSGFIL+QQ
Sbjct: 845 ASTISTSLGHFVYLMGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQT 904
Query: 421 ILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTVGQPLVLFIS 447
ILTL+D+VG R+IPLS+RLF+G HIPDV A F NAP T AAAAT+STVGQPL+L I
Sbjct: 905 ILTLVDIVGPAPRVIPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIP 964
BLAST of MELO3C025815 vs. NCBI nr
Match:
TYK27414.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 466.1 bits (1198), Expect = 3.6e-127
Identity = 285/514 (55.45%), Postives = 334/514 (64.98%), Query Frame = 0
Query: 1 MAPSPPKT-ATTTKGKCYKGQH--------SVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPS PK+ + +G H S H RR D V VTIKKEV +VSP T H
Sbjct: 478 MAPSSPKSKVRRSVAAIIEGLHSPLTSPIRSSHVRRPSDLVFPVTIKKEVPEVSPPHTFH 537
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
SSSM +K SVETVVLDS+ D +NV+LSTL KAR+ + S TPL SP
Sbjct: 538 PFVSSSMPATKTSVETVVLDSDSSDSDNNVVLSTLLHHKARHHNNESLTPLQPRPTSSSP 597
Query: 121 SRPASPLKDVPSQSMDYA-----------SLPTDDDDASDDTDKNYIVVTEDTLAPKEFT 180
R AS K+VP ++ D SLPTD DDASD+TD++Y++ TE+T P+E +
Sbjct: 598 PRDASLSKEVPPRTTDQGKSSAAPSYLPDSLPTDVDDASDETDEDYVLGTEETTVPEETS 657
Query: 181 TSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA--- 240
TS+E +S +NR EP+S EG ESSI MSPP+HVGSSS P PP+KG RVISTKA
Sbjct: 658 TSSEASVSSSENRPLEPRSPEGSRESSIPMSPPRHVGSSSGPRRPPVKGHRVISTKADQR 717
Query: 241 ---------------------------------------------CPAILDLICNAGLLR 300
CP IL+LI AGL
Sbjct: 718 KIPLNVPSFLIDGVSFHSEEDAHKWKYVVKRRIADEANISDQYNLCPTILELIRMAGLTH 777
Query: 301 TIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHKLPIAYLTVKYAILHWIGISNWIPSTY 360
T+ EVG FYP+LI EL+VN PSDFND S +E+HKL +A LTVKYAILH IGISNWI TY
Sbjct: 778 TMSEVGPFYPRLICELIVNLPSDFNDPSVKEYHKLSVASLTVKYAILHRIGISNWISCTY 837
Query: 361 ASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLSGFILSQQPA 420
ASTISTSLGHFVYL+G VKVNVGE IFNHLLRHV+TFAI+IPI FPR+LSGFIL+QQ
Sbjct: 838 ASTISTSLGHFVYLMGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQT 897
Query: 421 ILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTVGQPLVLFIS 447
ILTL+D+VG R+IPLS+RLF+G HIPDV A F NAP T AAAAT+STVGQPL+L I
Sbjct: 898 ILTLVDIVGPAPRVIPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIP 957
BLAST of MELO3C025815 vs. NCBI nr
Match:
KAA0065488.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08728.1 putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 462.2 bits (1188), Expect = 5.2e-126
Identity = 298/541 (55.08%), Postives = 337/541 (62.29%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCY---------KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPSP KT TTTKGK Y K H A D SL+T S VSP RTSH
Sbjct: 271 MAPSPSKTTTTTKGKHYKCIPTRHLFKKIHRSMAAIDNDQHSLLT-----SPVSPPRTSH 330
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
S SSS+SRS VSVETVVLDS+ DG DNVI C SP
Sbjct: 331 PSASSSVSRSSVSVETVVLDSDSSDGNDNVI-----SC--------------------SP 390
Query: 121 SRPASPLKDVPSQSMDY--------------ASLPTDDDDASDDTDKNYIVVTEDTLAPK 180
SR ASP KDV S++ D+ AS T+D++ASDDT+++Y+ + E+T P+
Sbjct: 391 SRVASPSKDVLSRTTDHGKSPTTQSFPVSPQASFSTNDEEASDDTNEDYVPIPEETPTPE 450
Query: 181 EFTTSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA 240
E TTS EDH+S P NR EPQSTEG ESSI M PP+H ++P
Sbjct: 451 ETTTSAEDHVSSPKNRMLEPQSTEGLGESSISMLPPEH-------YYP------------ 510
Query: 241 CPAILDLICNAGLLRTIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHK----------- 300
PAILDLICN GLL T+ EVG FYP+LI ELVVN PSDFNDLS EEF+K
Sbjct: 511 YPAILDLICNVGLLHTVSEVGPFYPRLICELVVNLPSDFNDLSTEEFYKVHIRGVCYNVS 570
Query: 301 -------------------------------------------LPIAYLTVKYAILHWIG 360
LPIA LTVKYAIL+ IG
Sbjct: 571 PELLNQFLDITLPTNYAILYSTPECLAEELTEGTVPVWPVDGQLPIASLTVKYAILYQIG 630
Query: 361 ISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLS 420
ISN IPST+AS IST+LGHFVYLVGT VKVNVG+FIFNHLLRHVDTFAI+IPICFPRLLS
Sbjct: 631 ISNRIPSTHASIISTTLGHFVYLVGTRVKVNVGKFIFNHLLRHVDTFAIHIPICFPRLLS 690
Query: 421 GFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTV 465
GFILSQQP ILT LD VGTT RIIP+S+RLF+GFHIPDV A+F +APG TRAA AT+ T+
Sbjct: 691 GFILSQQPTILTPLDTVGTTPRIIPVSMRLFQGFHIPDVAAKFESAPGGTRAAIATYPTI 750
BLAST of MELO3C025815 vs. ExPASy TrEMBL
Match:
A0A5D3C7Y0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001560 PE=4 SV=1)
HSP 1 Score: 775.0 bits (2000), Expect = 1.8e-220
Identity = 424/484 (87.60%), Postives = 426/484 (88.02%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCYKGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
MAPSPPKTATTT KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR
Sbjct: 1 MAPSPPKTATTT-----KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
Query: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSPSRPASPLKD 120
SKVSVETVVLDSNFFDGTDNVILSTLFR +PS ASP
Sbjct: 61 SKVSVETVVLDSNFFDGTDNVILSTLFR--------------------SAPSFIASP--- 120
Query: 121 VPSQSMDYASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST
Sbjct: 121 -------QASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
Query: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF
Sbjct: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
Query: 241 YPQLIYELVVNQPSDFNDLSAEEFHK-------------------LPIAYLTVKYAILHW 300
YPQLIYELVVNQPSDFNDLSAEEFHK LPIAYLTVKYAILHW
Sbjct: 241 YPQLIYELVVNQPSDFNDLSAEEFHKRLAEELTGGIVPVWIVDGQLPIAYLTVKYAILHW 300
Query: 301 IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRL 360
IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLR+VDTFAIYIPICFPRL
Sbjct: 301 IGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRYVDTFAIYIPICFPRL 360
Query: 361 LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS 420
LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS
Sbjct: 361 LSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHS 420
Query: 421 TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP 466
TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP
Sbjct: 421 TVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHVALEPPASPP 449
BLAST of MELO3C025815 vs. ExPASy TrEMBL
Match:
A0A5A7UTK0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00790 PE=4 SV=1)
HSP 1 Score: 773.9 bits (1997), Expect = 3.9e-220
Identity = 425/493 (86.21%), Postives = 427/493 (86.61%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCYKGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
MAPSPPKTATTT KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR
Sbjct: 1 MAPSPPKTATTT-----KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSHSSTSSSMSR 60
Query: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSPSRPASPLKD 120
SKVSVETVVLDSNFFDGTDNVILSTLFR A +PS ASP
Sbjct: 61 SKVSVETVVLDSNFFDGTDNVILSTLFRFSA------------------APSFIASP--- 120
Query: 121 VPSQSMDYASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
ASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST
Sbjct: 121 -------QASLPTDDDDASDDTDKNYIVVTEDTLAPKEFTTSTEDHISPPDNRTSEPQST 180
Query: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF
Sbjct: 181 EGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKACPAILDLICNAGLLRTIFEVGLF 240
Query: 241 YPQLIYELVVNQPSDFNDLSAEEFHK----------------------------LPIAYL 300
YPQLIYELVVNQPSDFNDLSAEEFHK LPIAYL
Sbjct: 241 YPQLIYELVVNQPSDFNDLSAEEFHKVHIWGVCFNRLAEELTGGIVPVWIVDGQLPIAYL 300
Query: 301 TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAI 360
TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLR+VDTFAI
Sbjct: 301 TVKYAILHWIGISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRYVDTFAI 360
Query: 361 YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR 420
YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR
Sbjct: 361 YIPICFPRLLSGFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGR 420
Query: 421 TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV 466
TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV
Sbjct: 421 TRAAAATHSTVGQPLVLFISLSNRLLQALMAESRSHTRHISKLSDRRTVLDAVLRDLRHV 460
BLAST of MELO3C025815 vs. ExPASy TrEMBL
Match:
A0A5D3DV74 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001030 PE=4 SV=1)
HSP 1 Score: 466.1 bits (1198), Expect = 1.7e-127
Identity = 285/514 (55.45%), Postives = 334/514 (64.98%), Query Frame = 0
Query: 1 MAPSPPKT-ATTTKGKCYKGQH--------SVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPS PK+ + +G H S H RR D V VTIKKEV +VSP T H
Sbjct: 478 MAPSSPKSKVRRSVAAIIEGLHSPLTSPIRSSHVRRPSDLVFPVTIKKEVPEVSPPHTFH 537
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
SSSM +K SVETVVLDS+ D +NV+LSTL KAR+ + S TPL SP
Sbjct: 538 PFVSSSMPATKTSVETVVLDSDSSDSDNNVVLSTLLHHKARHHNNESLTPLQPRPTSSSP 597
Query: 121 SRPASPLKDVPSQSMDYA-----------SLPTDDDDASDDTDKNYIVVTEDTLAPKEFT 180
R AS K+VP ++ D SLPTD DDASD+TD++Y++ TE+T P+E +
Sbjct: 598 PRDASLSKEVPPRTTDQGKSSAAPSYLPDSLPTDVDDASDETDEDYVLGTEETTVPEETS 657
Query: 181 TSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA--- 240
TS+E +S +NR EP+S EG ESSI MSPP+HVGSSS P PP+KG RVISTKA
Sbjct: 658 TSSEASVSSSENRPLEPRSPEGSRESSIPMSPPRHVGSSSGPRRPPVKGHRVISTKADQR 717
Query: 241 ---------------------------------------------CPAILDLICNAGLLR 300
CP IL+LI AGL
Sbjct: 718 KIPLNVPSFLIDGVSFHSEEDAHKWKYVVKRRIADEANISDQYNLCPTILELIRMAGLTH 777
Query: 301 TIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHKLPIAYLTVKYAILHWIGISNWIPSTY 360
T+ EVG FYP+LI EL+VN PSDFND S +E+HKL +A LTVKYAILH IGISNWI TY
Sbjct: 778 TMSEVGPFYPRLICELIVNLPSDFNDPSVKEYHKLSVASLTVKYAILHRIGISNWISCTY 837
Query: 361 ASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLSGFILSQQPA 420
ASTISTSLGHFVYL+G VKVNVGE IFNHLLRHV+TFAI+IPI FPR+LSGFIL+QQ
Sbjct: 838 ASTISTSLGHFVYLMGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQT 897
Query: 421 ILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTVGQPLVLFIS 447
ILTL+D+VG R+IPLS+RLF+G HIPDV A F NAP T AAAAT+STVGQPL+L I
Sbjct: 898 ILTLVDIVGPAPRVIPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIP 957
BLAST of MELO3C025815 vs. ExPASy TrEMBL
Match:
A0A5A7V4G0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00570 PE=4 SV=1)
HSP 1 Score: 466.1 bits (1198), Expect = 1.7e-127
Identity = 285/514 (55.45%), Postives = 334/514 (64.98%), Query Frame = 0
Query: 1 MAPSPPKT-ATTTKGKCYKGQH--------SVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPS PK+ + +G H S H RR D V VTIKKEV +VSP T H
Sbjct: 485 MAPSSPKSKVRRSVAAIIEGLHSPLTSPIRSSHVRRPSDLVFPVTIKKEVPEVSPPHTFH 544
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
SSSM +K SVETVVLDS+ D +NV+LSTL KAR+ + S TPL SP
Sbjct: 545 PFVSSSMPATKTSVETVVLDSDSSDSDNNVVLSTLLHHKARHHNNESLTPLQPRPTSSSP 604
Query: 121 SRPASPLKDVPSQSMDYA-----------SLPTDDDDASDDTDKNYIVVTEDTLAPKEFT 180
R AS K+VP ++ D SLPTD DDASD+TD++Y++ TE+T P+E +
Sbjct: 605 PRDASLSKEVPPRTTDQGKSSAAPSYLPDSLPTDVDDASDETDEDYVLGTEETTVPEETS 664
Query: 181 TSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA--- 240
TS+E +S +NR EP+S EG ESSI MSPP+HVGSSS P PP+KG RVISTKA
Sbjct: 665 TSSEASVSSSENRPLEPRSPEGSRESSIPMSPPRHVGSSSGPRRPPVKGHRVISTKADQR 724
Query: 241 ---------------------------------------------CPAILDLICNAGLLR 300
CP IL+LI AGL
Sbjct: 725 KIPLNVPSFLIDGVSFHSEEDAHKWKYVVKRRIADEANISDQYNLCPTILELIRMAGLTH 784
Query: 301 TIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHKLPIAYLTVKYAILHWIGISNWIPSTY 360
T+ EVG FYP+LI EL+VN PSDFND S +E+HKL +A LTVKYAILH IGISNWI TY
Sbjct: 785 TMSEVGPFYPRLICELIVNLPSDFNDPSVKEYHKLSVASLTVKYAILHRIGISNWISCTY 844
Query: 361 ASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLSGFILSQQPA 420
ASTISTSLGHFVYL+G VKVNVGE IFNHLLRHV+TFAI+IPI FPR+LSGFIL+QQ
Sbjct: 845 ASTISTSLGHFVYLMGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQT 904
Query: 421 ILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTVGQPLVLFIS 447
ILTL+D+VG R+IPLS+RLF+G HIPDV A F NAP T AAAAT+STVGQPL+L I
Sbjct: 905 ILTLVDIVGPAPRVIPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIP 964
BLAST of MELO3C025815 vs. ExPASy TrEMBL
Match:
A0A5A7VCX5 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00340 PE=4 SV=1)
HSP 1 Score: 462.2 bits (1188), Expect = 2.5e-126
Identity = 298/541 (55.08%), Postives = 337/541 (62.29%), Query Frame = 0
Query: 1 MAPSPPKTATTTKGKCY---------KGQHSVHARRSPDPVSLVTIKKEVSKVSPSRTSH 60
MAPSP KT TTTKGK Y K H A D SL+T S VSP RTSH
Sbjct: 271 MAPSPSKTTTTTKGKHYKCIPTRHLFKKIHRSMAAIDNDQHSLLT-----SPVSPPRTSH 330
Query: 61 SSTSSSMSRSKVSVETVVLDSNFFDGTDNVILSTLFRCKARYRTDLSPTPLHLNQVLHSP 120
S SSS+SRS VSVETVVLDS+ DG DNVI C SP
Sbjct: 331 PSASSSVSRSSVSVETVVLDSDSSDGNDNVI-----SC--------------------SP 390
Query: 121 SRPASPLKDVPSQSMDY--------------ASLPTDDDDASDDTDKNYIVVTEDTLAPK 180
SR ASP KDV S++ D+ AS T+D++ASDDT+++Y+ + E+T P+
Sbjct: 391 SRVASPSKDVLSRTTDHGKSPTTQSFPVSPQASFSTNDEEASDDTNEDYVPIPEETPTPE 450
Query: 181 EFTTSTEDHISPPDNRTSEPQSTEGPSESSILMSPPKHVGSSSKPHHPPIKGQRVISTKA 240
E TTS EDH+S P NR EPQSTEG ESSI M PP+H ++P
Sbjct: 451 ETTTSAEDHVSSPKNRMLEPQSTEGLGESSISMLPPEH-------YYP------------ 510
Query: 241 CPAILDLICNAGLLRTIFEVGLFYPQLIYELVVNQPSDFNDLSAEEFHK----------- 300
PAILDLICN GLL T+ EVG FYP+LI ELVVN PSDFNDLS EEF+K
Sbjct: 511 YPAILDLICNVGLLHTVSEVGPFYPRLICELVVNLPSDFNDLSTEEFYKVHIRGVCYNVS 570
Query: 301 -------------------------------------------LPIAYLTVKYAILHWIG 360
LPIA LTVKYAIL+ IG
Sbjct: 571 PELLNQFLDITLPTNYAILYSTPECLAEELTEGTVPVWPVDGQLPIASLTVKYAILYQIG 630
Query: 361 ISNWIPSTYASTISTSLGHFVYLVGTEVKVNVGEFIFNHLLRHVDTFAIYIPICFPRLLS 420
ISN IPST+AS IST+LGHFVYLVGT VKVNVG+FIFNHLLRHVDTFAI+IPICFPRLLS
Sbjct: 631 ISNRIPSTHASIISTTLGHFVYLVGTRVKVNVGKFIFNHLLRHVDTFAIHIPICFPRLLS 690
Query: 421 GFILSQQPAILTLLDVVGTTLRIIPLSVRLFKGFHIPDVVAEFINAPGRTRAAAATHSTV 465
GFILSQQP ILT LD VGTT RIIP+S+RLF+GFHIPDV A+F +APG TRAA AT+ T+
Sbjct: 691 GFILSQQPTILTPLDTVGTTPRIIPVSMRLFQGFHIPDVAAKFESAPGGTRAAIATYPTI 750
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK07258.1 | 3.6e-220 | 87.60 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0058488.1 | 8.1e-220 | 86.21 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0062468.1 | 3.6e-127 | 55.45 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| TYK27414.1 | 3.6e-127 | 55.45 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0065488.1 | 5.2e-126 | 55.08 | putative gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08728.1 putative gag... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C7Y0 | 1.8e-220 | 87.60 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7UTK0 | 3.9e-220 | 86.21 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| A0A5D3DV74 | 1.7e-127 | 55.45 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7V4G0 | 1.7e-127 | 55.45 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| A0A5A7VCX5 | 2.5e-126 | 55.08 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
