MELO3C025792.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C025792.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon protein
Locationchr04: 18600035 .. 18600975 (+)
RNA-Seq ExpressionMELO3C025792.jh1
SyntenyMELO3C025792.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGCCCCCAAACATGTATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCTGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACTATTTGACAACTGGGTTAGGGTAAGGAAATTTGATATTTAAAACGTGACAATACTTGTGCAGTGTACTTTGATTGACAATTTTTCGTAATGGTAGTTTGAAGTGCTCGTGTTTTTTATATAGTCGCATTTAGCAGCGAAAAGCCTCCTTAACAAAGCCTCTTTAACAAACTCTTTCCTTATTATGACAAACTTACATATGTGTTCGAAAGGGATAAGGCAACTGGTCGTCGACGTCGGGTCTAATGAGCCTATCAGGTACGAGGGGTTTGACATGCCCGATGGAAACGATATGAGGTTTCCATCCATGTACAACTAGAGGATTGACATGTTCCAGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTGCGTGTGCCCTTGCCAATGACACCGCAGTTCACCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGACGACATACGCAGTTCATAG

mRNA sequence

TGTGCCCCCAAACATGTATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCTGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACTATTTGACAACTGGGTTAGGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTGCGTGTGCCCTTGCCAATGACACCGCAGTTCACCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGACGACATACGCAGTTCATAG

Coding sequence (CDS)

ATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCTGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACTATTTGACAACTGGGTTAGGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTGCGTGTGCCCTTGCCAATGACACCGCAGTTCACCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGACGACATACGCAGTTCATAG

Protein sequence

MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMDDIRSS
Homology
BLAST of MELO3C025792.jh1 vs. NCBI nr
Match: TYK07192.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 373 bits (957), Expect = 4.63e-129
Identity = 192/245 (78.37%), Postives = 195/245 (79.59%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI
Sbjct: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHA------------- 120
           KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVR  + A             
Sbjct: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRSHLAAKSLLNKASLTNSF 120

Query: 121 ----------------------SRPTRL--------SDGRPRSSRSKRKWGSEWEGKIKM 180
                                 + P R         +D RPRSSRSKRKWGSEWEGKIKM
Sbjct: 121 LIMTNLHMCSKGIRQLVVDVGSNEPIRYEGFDMPDGNDMRPRSSRSKRKWGSEWEGKIKM 180

Query: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 202
           IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD
Sbjct: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 240

BLAST of MELO3C025792.jh1 vs. NCBI nr
Match: KAA0065625.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (941), Expect = 1.57e-126
Identity = 189/245 (77.14%), Postives = 192/245 (78.37%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATT+IECRI
Sbjct: 7   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTIIECRI 66

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHASR----------- 120
           KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKE FDNWVR  + A R           
Sbjct: 67  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKEQFDNWVRSHLAAKRLLNKASLTNSF 126

Query: 121 ------------------------PTRL--------SDGRPRSSRSKRKWGSEWEGKIKM 180
                                   P R         +D RPRSSRSKRKWGSEWEGKIKM
Sbjct: 127 LIMTNLHMCSKGIRQLVVDVGSNEPIRYEGFDMPDGNDMRPRSSRSKRKWGSEWEGKIKM 186

Query: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 202
           IHMVLECANDQLRTIVEWP CALANDTAV QEFLCLLREMPDPSSLDRAMCQRLLLCSMD
Sbjct: 187 IHMVLECANDQLRTIVEWPLCALANDTAVRQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 246

BLAST of MELO3C025792.jh1 vs. NCBI nr
Match: KAA0043337.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK02667.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (631), Expect = 5.51e-79
Identity = 133/239 (55.65%), Postives = 155/239 (64.85%), Query Frame = 0

Query: 7   GTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQT 66
           GTL+EC +ELVS G WK DNGTFRPGYL QLV MMAEKLP+C V+ATTVI+CRIKTLK+T
Sbjct: 18  GTLVECFMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPRCQVRATTVIDCRIKTLKRT 77

Query: 67  FQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVR------------------------ 126
           FQAIAE+ G ACSGFGWNDE KCI+ EKELFDNWVR                        
Sbjct: 78  FQAIAELRGPACSGFGWNDEEKCIVAEKELFDNWVRGDRSVRGDICGRGSNEPGGGYDRF 137

Query: 127 ---------------------DVVHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMV 186
                                D V ASRP+R S+GR  SS SKRK GS+ + +++ IH+ 
Sbjct: 138 DMGDGNEDFPPVYSQGIDLSQDDVRASRPSRTSEGRTGSSGSKRKRGSQRDFELEAIHLA 197

Query: 187 LECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMDDIR 200
           L+  NDQLR I EWPA  LAND  V  EF  +LREMP+ +SLDRA+ QR LL  MDD+R
Sbjct: 198 LDQTNDQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLR 256

BLAST of MELO3C025792.jh1 vs. NCBI nr
Match: KAA0041835.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK05356.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (622), Expect = 2.89e-78
Identity = 128/214 (59.81%), Postives = 140/214 (65.42%), Query Frame = 0

Query: 9   LIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQTFQ 68
           +++CLVELVS  EWK DNGTFRP YL QLV MM EKLP  HVQATT+I+ RIKT KQTFQ
Sbjct: 20  IVKCLVELVSTREWKFDNGTFRPSYLAQLVHMMVEKLPGFHVQATTIIDYRIKTFKQTFQ 79

Query: 69  AIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDV------------------------ 128
           AIAEM G ACSGFGWN  AKCII EKE+FDNWVR                          
Sbjct: 80  AIAEMWGPACSGFGWNHNAKCIIAEKEVFDNWVRSYRATKDLLNNPFSYYELAYVFNRDR 139

Query: 129 --------VHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWP 188
                   V  SRP   S+GR  SS SKR  GS+WEG++ +IHM LEC NDQLRTI EW 
Sbjct: 140 GIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTNDQLRTISEWS 199

Query: 189 ACALANDTAVHQEFLCLLREMPDPSSLDRAMCQR 190
           A  LANDT V QEFL LL EMPD  SLDR +CQR
Sbjct: 200 AHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 233

BLAST of MELO3C025792.jh1 vs. NCBI nr
Match: KAA0052331.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01891.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (622), Expect = 2.89e-77
Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           +DEGGGG        +   G WK DNGTF PGYL QLV MMAEKL  C V+ATTVI CRI
Sbjct: 83  LDEGGGGHSCGVFNGVGVNGGWKSDNGTFHPGYLAQLVHMMAEKLLGCQVRATTVINCRI 142

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHASRPTRLSDGRPRS 120
           KTLK+TFQAIAEM G AC+GFGWNDE KCII +KELFDNWVRD V ASRP+R S  R  S
Sbjct: 143 KTLKRTFQAIAEMRGPACNGFGWNDEEKCIISKKELFDNWVRDDVRASRPSRASKDRTGS 202

Query: 121 SRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDP 180
           S SKRK GS+ +  ++ IH+ L+  N+QLR I EWPA A AND  V  EF C+LREMP  
Sbjct: 203 SGSKRKRGSQRDLDVEGIHLALDQTNEQLRQIAEWPARAFANDNHVRTEFFCILREMPKL 262

Query: 181 SSLDRAMCQRLLLCSMDDIR 200
           +SLDRA+ QR LL  MDD+R
Sbjct: 263 TSLDRALLQRHLLSRMDDLR 282

BLAST of MELO3C025792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C7A9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00770 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 2.24e-129
Identity = 192/245 (78.37%), Postives = 195/245 (79.59%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI
Sbjct: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHA------------- 120
           KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVR  + A             
Sbjct: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRSHLAAKSLLNKASLTNSF 120

Query: 121 ----------------------SRPTRL--------SDGRPRSSRSKRKWGSEWEGKIKM 180
                                 + P R         +D RPRSSRSKRKWGSEWEGKIKM
Sbjct: 121 LIMTNLHMCSKGIRQLVVDVGSNEPIRYEGFDMPDGNDMRPRSSRSKRKWGSEWEGKIKM 180

Query: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 202
           IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD
Sbjct: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 240

BLAST of MELO3C025792.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VIN0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G00750 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 7.59e-127
Identity = 189/245 (77.14%), Postives = 192/245 (78.37%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATT+IECRI
Sbjct: 7   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTIIECRI 66

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHASR----------- 120
           KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKE FDNWVR  + A R           
Sbjct: 67  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKEQFDNWVRSHLAAKRLLNKASLTNSF 126

Query: 121 ------------------------PTRL--------SDGRPRSSRSKRKWGSEWEGKIKM 180
                                   P R         +D RPRSSRSKRKWGSEWEGKIKM
Sbjct: 127 LIMTNLHMCSKGIRQLVVDVGSNEPIRYEGFDMPDGNDMRPRSSRSKRKWGSEWEGKIKM 186

Query: 181 IHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 202
           IHMVLECANDQLRTIVEWP CALANDTAV QEFLCLLREMPDPSSLDRAMCQRLLLCSMD
Sbjct: 187 IHMVLECANDQLRTIVEWPLCALANDTAVRQEFLCLLREMPDPSSLDRAMCQRLLLCSMD 246

BLAST of MELO3C025792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BT72 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00140 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.67e-79
Identity = 133/239 (55.65%), Postives = 155/239 (64.85%), Query Frame = 0

Query: 7   GTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQT 66
           GTL+EC +ELVS G WK DNGTFRPGYL QLV MMAEKLP+C V+ATTVI+CRIKTLK+T
Sbjct: 18  GTLVECFMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPRCQVRATTVIDCRIKTLKRT 77

Query: 67  FQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVR------------------------ 126
           FQAIAE+ G ACSGFGWNDE KCI+ EKELFDNWVR                        
Sbjct: 78  FQAIAELRGPACSGFGWNDEEKCIVAEKELFDNWVRGDRSVRGDICGRGSNEPGGGYDRF 137

Query: 127 ---------------------DVVHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMV 186
                                D V ASRP+R S+GR  SS SKRK GS+ + +++ IH+ 
Sbjct: 138 DMGDGNEDFPPVYSQGIDLSQDDVRASRPSRTSEGRTGSSGSKRKRGSQRDFELEAIHLA 197

Query: 187 LECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDPSSLDRAMCQRLLLCSMDDIR 200
           L+  NDQLR I EWPA  LAND  V  EF  +LREMP+ +SLDRA+ QR LL  MDD+R
Sbjct: 198 LDQTNDQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLR 256

BLAST of MELO3C025792.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TK69 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00250 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.40e-78
Identity = 128/214 (59.81%), Postives = 140/214 (65.42%), Query Frame = 0

Query: 9   LIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQTFQ 68
           +++CLVELVS  EWK DNGTFRP YL QLV MM EKLP  HVQATT+I+ RIKT KQTFQ
Sbjct: 20  IVKCLVELVSTREWKFDNGTFRPSYLAQLVHMMVEKLPGFHVQATTIIDYRIKTFKQTFQ 79

Query: 69  AIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDV------------------------ 128
           AIAEM G ACSGFGWN  AKCII EKE+FDNWVR                          
Sbjct: 80  AIAEMWGPACSGFGWNHNAKCIIAEKEVFDNWVRSYRATKDLLNNPFSYYELAYVFNRDR 139

Query: 129 --------VHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWP 188
                   V  SRP   S+GR  SS SKR  GS+WEG++ +IHM LEC NDQLRTI EW 
Sbjct: 140 GIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTNDQLRTISEWS 199

Query: 189 ACALANDTAVHQEFLCLLREMPDPSSLDRAMCQR 190
           A  LANDT V QEFL LL EMPD  SLDR +CQR
Sbjct: 200 AHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 233

BLAST of MELO3C025792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BQ46 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001550 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.40e-77
Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 0

Query: 1   MDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRI 60
           +DEGGGG        +   G WK DNGTF PGYL QLV MMAEKL  C V+ATTVI CRI
Sbjct: 83  LDEGGGGHSCGVFNGVGVNGGWKSDNGTFHPGYLAQLVHMMAEKLLGCQVRATTVINCRI 142

Query: 61  KTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKELFDNWVRDVVHASRPTRLSDGRPRS 120
           KTLK+TFQAIAEM G AC+GFGWNDE KCII +KELFDNWVRD V ASRP+R S  R  S
Sbjct: 143 KTLKRTFQAIAEMRGPACNGFGWNDEEKCIISKKELFDNWVRDDVRASRPSRASKDRTGS 202

Query: 121 SRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWPACALANDTAVHQEFLCLLREMPDP 180
           S SKRK GS+ +  ++ IH+ L+  N+QLR I EWPA A AND  V  EF C+LREMP  
Sbjct: 203 SGSKRKRGSQRDLDVEGIHLALDQTNEQLRQIAEWPARAFANDNHVRTEFFCILREMPKL 262

Query: 181 SSLDRAMCQRLLLCSMDDIR 200
           +SLDRA+ QR LL  MDD+R
Sbjct: 263 TSLDRALLQRHLLSRMDDLR 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK07192.14.63e-12978.37retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0065625.11.57e-12677.14retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0043337.15.51e-7955.65retrotransposon protein [Cucumis melo var. makuwa] >TYK02667.1 retrotransposon p... [more]
KAA0041835.12.89e-7859.81retrotransposon protein [Cucumis melo var. makuwa] >TYK05356.1 retrotransposon p... [more]
KAA0052331.12.89e-7763.50retrotransposon protein [Cucumis melo var. makuwa] >TYK01891.1 retrotransposon p... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C7A92.24e-12978.37Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VIN07.59e-12777.14Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BT722.67e-7955.65Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TK691.40e-7859.81Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BQ461.40e-7763.50Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 8..103
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 8..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025792.jh1.t1MELO3C025792.jh1.t1mRNA