MELO3C025754 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025754
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 25984022 .. 25984738 (-)
RNA-Seq Expression	MELO3C025754
Synteny	MELO3C025754

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAAGTAGAGTTAATCAAACACCGGAGGCCCTCAAAAAGCCCCAAAACCAAAACCCACATTCTCTACACTCTTTATTCTCTCTCCTCTTGTTCTTCCATTCTTTTCTCCTCCATCAAAGAACTAAAACCAATTCGTCATCATCATCATCTTCTTCTTCTTCTTCTTGTCAGAGAAATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGTATTTCCCCTTAACCCTAACCAACTTTTCTCTTTCTCTTAATACATAATACACTCCTATTATCACGTTGCTCTGTTTTTTGAGTTGCAGGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAGATTAGGAAACAGAGTATCCATGATCTGGGTAATTTGGATTTGATATATTTTGTTAATTTTGATGTGGGTTTGTTTTTTATGTATTGTTCTTGTTTGATATGAAATGGGATTTGTTTTCTTTCATGTACTATGTTAAGAGATTGGGAAAAAATTTGACTGGTTATGAATGGGAATCTAGAAAAATTAAAGAACTTGTTTGTCATTTAGTACAAA

mRNA sequence

ACCCAAGTAGAGTTAATCAAACACCGGAGGCCCTCAAAAAGCCCCAAAACCAAAACCCACATTCTCTACACTCTTTATTCTCTCTCCTCTTGTTCTTCCATTCTTTTCTCCTCCATCAAAGAACTAAAACCAATTCGTCATCATCATCATCTTCTTCTTCTTCTTCTTGTCAGAGAAATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAGATTAGGAAACAGAGTATCCATGATCTGGGTAATTTGGATTTGATATATTTTGTTAATTTTGATGTGGGTTTGTTTTTTATGTATTGTTCTTGTTTGATATGAAATGGGATTTGTTTTCTTTCATGTACTATGTTAAGAGATTGGGAAAAAATTTGACTGGTTATGAATGGGAATCTAGAAAAATTAAAGAACTTGTTTGTCATTTAGTACAAA

Coding sequence (CDS)

ACCCAAGTAGAGTTAATCAAACACCGGAGGCCCTCAAAAAGCCCCAAAACCAAAACCCACATTCTCTACACTCTTTATTCTCTCTCCTCTTGTTCTTCCATTCTTTTCTCCTCCATCAAAGAACTAAAACCAATTCGTCATCATCATCATCTTCTTCTTCTTCTTCTTGTCAGAGAAATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAG

Protein sequence

TQVELIKHRRPSKSPKTKTHILYTLYSLSSCSSILFSSIKELKPIRHHHHLLLLLLVREMQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGDLEDFVNETDFMICAAKAA

Homology

[Close]

BLAST of MELO3C025754 vs. NCBI nr
Match: KAA0035320.1 (hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa] >TYK14318.1 hypothetical protein E5676_scaffold84G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 119
           MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD
Sbjct: 1   MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 60

Query: 120 LEDFVNETDFMICAAKAA 138
           LEDFVNETDFMICAAKAA
Sbjct: 61  LEDFVNETDFMICAAKAA 78

[Close]

BLAST of MELO3C025754 vs. NCBI nr
Match: KGN47309.1 (hypothetical protein Csa_022984 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 119
           MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRT+RS+NMK+R LEAIREGD
Sbjct: 1   MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTKRSSNMKHRLLEAIREGD 60

Query: 120 LEDFVNETDFMICAAKAA 138
           LEDFVNE D MICAAKAA
Sbjct: 61  LEDFVNENDLMICAAKAA 78

[Close]

BLAST of MELO3C025754 vs. NCBI nr
Match: XP_023006923.1 (uncharacterized protein LOC111499567 [Cucurbita maxima])

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-07
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMK----YRY-LEA 119
           M SK+ S GLPLC+S F+LS+ SLST++ DHDRRREAM+ R   S +       RY ++A
Sbjct: 1   MPSKLVSPGLPLCLSGFSLSHRSLSTEMEDHDRRREAMRRRRSSSADAGGIGFTRYIIQA 60

Query: 120 IREGDLEDFVNETDFMICAAKAA 138
           I +GDL D   +T  +  AAKAA
Sbjct: 61  IGDGDLHDLCEKTK-LTSAAKAA 82

[Close]

BLAST of MELO3C025754 vs. NCBI nr
Match: KAG6605527.1 (hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035464.1 hypothetical protein SDJN02_02260 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-07
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMK----YRY-LEA 119
           M SK+ S GLPLC+S F+LS+  L+T++ DHDRRREAM+ R   S +       RY ++A
Sbjct: 1   MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQA 60

Query: 120 IREGDLEDFVNETDFMICAAKAA 138
           I +GDL D   +T  +  AAKAA
Sbjct: 61  IGDGDLHDLCEKTK-LTSAAKAA 82

[Close]

BLAST of MELO3C025754 vs. NCBI nr
Match: XP_034687221.1 (uncharacterized protein LOC117915698 [Vitis riparia] >CBI16279.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 54.3 bits (129), Expect = 9.6e-04
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 65  GSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKY------------RYL 124
           GS GLPLC+S  T   H++S ++ADHDRRREAMK +  ++    +            R +
Sbjct: 8   GSYGLPLCVSGIT-HRHTVSDEMADHDRRREAMKRKISQARESVHTNQEMGIGRNYGREV 67

Query: 125 EAIREGDL-EDFVNETDFMICAAKAA 138
           E I+EG++ ED  +    + C AKAA
Sbjct: 68  EQIKEGEVDEDHDHYRPCLACTAKAA 92

[Close]

BLAST of MELO3C025754 vs. ExPASy TrEMBL
Match: A0A5D3CSY7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00460 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 119
           MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD
Sbjct: 1   MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 60

Query: 120 LEDFVNETDFMICAAKAA 138
           LEDFVNETDFMICAAKAA
Sbjct: 61  LEDFVNETDFMICAAKAA 78

[Close]

BLAST of MELO3C025754 vs. ExPASy TrEMBL
Match: A0A0A0KEP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290900 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.9e-31
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 119
           MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRT+RS+NMK+R LEAIREGD
Sbjct: 1   MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTKRSSNMKHRLLEAIREGD 60

Query: 120 LEDFVNETDFMICAAKAA 138
           LEDFVNE D MICAAKAA
Sbjct: 61  LEDFVNENDLMICAAKAA 78

[Close]

BLAST of MELO3C025754 vs. ExPASy TrEMBL
Match: A0A6J1L6A3 (uncharacterized protein LOC111499567 OS=Cucurbita maxima OX=3661 GN=LOC111499567 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-08
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 60  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMK----YRY-LEA 119
           M SK+ S GLPLC+S F+LS+ SLST++ DHDRRREAM+ R   S +       RY ++A
Sbjct: 1   MPSKLVSPGLPLCLSGFSLSHRSLSTEMEDHDRRREAMRRRRSSSADAGGIGFTRYIIQA 60

Query: 120 IREGDLEDFVNETDFMICAAKAA 138
           I +GDL D   +T  +  AAKAA
Sbjct: 61  IGDGDLHDLCEKTK-LTSAAKAA 82

[Close]

BLAST of MELO3C025754 vs. ExPASy TrEMBL
Match: D7SKV1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g03210 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.7e-04
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 65  GSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKY------------RYL 124
           GS GLPLC+S  T   H++S ++ADHDRRREAMK +  ++    +            R +
Sbjct: 8   GSYGLPLCVSGIT-HRHTVSDEMADHDRRREAMKRKISQARESVHTNQEMGIGRNYGREV 67

Query: 125 EAIREGDL-EDFVNETDFMICAAKAA 138
           E I+EG++ ED  +    + C AKAA
Sbjct: 68  EQIKEGEVDEDHDHYRPCLACTAKAA 92

The following BLAST results are available for this feature:

BLAST of MELO3C025754 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C025754 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035320.1	3.1e-34	100.00	hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa] >TYK143...	[more]
KGN47309.1	2.1e-30	92.31	hypothetical protein Csa_022984 [Cucumis sativus]	[more]
XP_023006923.1	1.1e-07	50.60	uncharacterized protein LOC111499567 [Cucurbita maxima]	[more]
KAG6605527.1	9.3e-07	48.19	hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_034687221.1	9.6e-04	39.53	uncharacterized protein LOC117915698 [Vitis riparia] >CBI16279.3 unnamed protein...	[more]

BLAST of MELO3C025754 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSY7	1.5e-34	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KEP9	9.9e-31	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290900 PE=4 SV=1	[more]
A0A6J1L6A3	5.3e-08	50.60	uncharacterized protein LOC111499567 OS=Cucurbita maxima OX=3661 GN=LOC111499567...	[more]
D7SKV1	4.7e-04	39.53	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g03210 PE=4 SV=...	[more]

BLAST of MELO3C025754 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025754.1	MELO3C025754.1	mRNA