MELO3C025714 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025714
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	WUSCHEL-related homeobox 3
Location	chr11: 25576465 .. 25577760 (-)
RNA-Seq Expression	MELO3C025714
Synteny	MELO3C025714

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATCTTTCTATATATACACACAAACACAAAACACAAAACTCTCACCTCCAAATTCCAAAAACAAACAAAAACAAAAGTTATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGGTACTTACTCTTTTCTTTGTTGACTTTATTCATATTCAAATGTTTGACTTTTAAGTTTTTTTTAGTACATTAAACTTAGGTAGAAAATTTGGAGTAATTTCAAAAGTCAAGGGAAATAATACATACTGATGACACAAGAAAGTTCTAATTGCACTCATCTTCATTGTATTCTGTTCTTTTAGATATATGTATAAATTATTGAAAACTATGCAAAGATAAGTGTGGTTGGAGGTATAGAAAGTCAAAAGTATTCTTCTTATAATATTAATGTGTAAATGTTCTTTTTCTATTTATGCGAAAGCTTTATTTATGCAGTGTAATGAATTAATGAGATTTTGTTCATGCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAATGGAAATTAAATTAAAAAAGAATAAGAAAAAAGAAAATATTCAAGGGAAAAATAGGGTAGGGTCAGGCGTAGGGTAAGTAGTAGTTAGGGTTTTAAAATTGGGTGTGTCATAATAATTGTTATTGTAAAAATTTAGAAGGAGAAAAATCTGATTTGCAGTTTCACCTTTTCCATTACTTATATTCTGCCTGCCTCAACCAATCTCTCTCTCATTAATGGTGTCTTTCTTAAATATTTTTATTATTATGAATAGTATATTATTATTTTCATTATATCAATTTACAAAAC

mRNA sequence

ACAAATCTTTCTATATATACACACAAACACAAAACACAAAACTCTCACCTCCAAATTCCAAAAACAAACAAAAACAAAAGTTATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAATGGAAATTAAATTAAAAAAGAATAAGAAAAAAGAAAATATTCAAGGGAAAAATAGGGTAGGGTCAGGCGTAGGGTAAGTAGTAGTTAGGGTTTTAAAATTGGGTGTGTCATAATAATTGTTATTGTAAAAATTTAGAAGGAGAAAAATCTGATTTGCAGTTTCACCTTTTCCATTACTTATATTCTGCCTGCCTCAACCAATCTCTCTCTCATTAATGGTGTCTTTCTTAAATATTTTTATTATTATGAATAGTATATTATTATTTTCATTATATCAATTTACAAAAC

Coding sequence (CDS)

ATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAA

Protein sequence

MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKEEEGTSGNGGWGN

Homology

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BLAST of MELO3C025714 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-29
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DDHD--HHHFFQY 110
           ARDRQKLR+KL KQL  QQH   ++ Q+                   D H+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of MELO3C025714 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQL-PSPSS 121
           KLRR+L      HH       +     HHH          PQLLP L PS SS
Sbjct: 86  KLRRRL---CISHHLLSCAHYY-----HHHLAAAAAVVPPPQLLPPLHPSSSS 130

[Close]

BLAST of MELO3C025714 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 55/77 (71.43%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHH 83
          +RQ+LRR+L  + QQ +
Sbjct: 64 ERQRLRRRLCARHQQQY 80

[Close]

BLAST of MELO3C025714 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-26
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHHFFMKRQ 89
          +RQ+LRR+L  + QQ +   ++Q
Sbjct: 64 ERQRLRRRLCARHQQQYAQQQQQ 86

[Close]

BLAST of MELO3C025714 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-25
Identity = 66/113 (58.41%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQL-PSPSS 121
           KLRR+L      HH       +     HHH           +LL  L PS SS
Sbjct: 86  KLRRRL---CISHHLLSCAHYY-----HHHLAAAAAVVPTTKLLTTLNPSSSS 130

[Close]

BLAST of MELO3C025714 vs. NCBI nr
Match: XP_008463857.1 (PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 6.5e-107
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
           LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE
Sbjct: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180

Query: 181 EEGTSGNGGWGN 193
           EEGTSGNGGWGN
Sbjct: 181 EEGTSGNGGWGN 192

[Close]

BLAST of MELO3C025714 vs. NCBI nr
Match: XP_004148244.1 (WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Csa_022936 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 3.7e-102
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD-DHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD  HDHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180
           SLQRE+GEEEAATEVEGGGGRRW+GGD+GTTV EEDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 193
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

[Close]

BLAST of MELO3C025714 vs. NCBI nr
Match: XP_038902731.1 (WUSCHEL-related homeobox 3-like [Benincasa hispida])

HSP 1 Score: 311.6 bits (797), Expect = 4.7e-81
Identity = 163/192 (84.90%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPS ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSGITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHF MKR RFD   +H  FF YFLP HVPQLLP  PSPS 
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFLMKRHRFD---EHTQFFHYFLPQHVPQLLP-FPSPSH 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
            Q+E GEEE ATEVE GG   W GGD+GTTVAEEDGETTC NG+LRTLELFPVR SW+KE
Sbjct: 121 -QKE-GEEEPATEVE-GGRTTWFGGDEGTTVAEEDGETTCRNGTLRTLELFPVRASWMKE 180

Query: 181 EEGTSGNGGWGN 193
           EEGTSGNGGW N
Sbjct: 181 EEGTSGNGGWMN 185

[Close]

BLAST of MELO3C025714 vs. NCBI nr
Match: XP_022944088.1 (putative WUSCHEL-related homeobox 2 [Cucurbita moschata])

HSP 1 Score: 282.0 bits (720), Expect = 4.0e-72
Identity = 150/196 (76.53%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MSP----SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP    ++ TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLP 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD    HHFF  FL HH   L P LP
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDD----HHFFHCFLQHHQRFLPPLLP 120

Query: 121 SPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGS 180
            P+  Q E G E   TEVEG       GGDDG  V EED ETTCGNG+LRTLELFPVR  
Sbjct: 121 LPTHFQGE-GGEGRTTEVEG-------GGDDGMAVGEEDAETTCGNGTLRTLELFPVRAG 180

Query: 181 WVKEEEGTSGNGGWGN 193
           WVKEEEG SGNGGWGN
Sbjct: 181 WVKEEEGGSGNGGWGN 184

[Close]

BLAST of MELO3C025714 vs. NCBI nr
Match: KAG6570743.1 (WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67
Identity = 145/197 (73.60%), Postives = 150/197 (76.14%), Query Frame = 0


Query: 1   MSP---SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFY 60
           MSP   ++ TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFY
Sbjct: 1   MSPAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY 60

Query: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQ--L 120
           WFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD H  H F Q    HH  Q  P   L
Sbjct: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHHFFHCFLQQQQHHHHHQRFPPPLL 120

Query: 121 PSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRG 180
           P P+  Q     E   TEVEG       GGDDG  V EED ETTC NG+LRTLELFPVR 
Sbjct: 121 PLPTHFQ----GEGRTTEVEG-------GGDDGMAVGEEDAETTCRNGTLRTLELFPVRA 180

Query: 181 SWVKEEEGTSGNGGWGN 193
            WVKEEEG SGNGGWGN
Sbjct: 181 GWVKEEEGGSGNGGWGN 186

[Close]

BLAST of MELO3C025714 vs. ExPASy TrEMBL
Match: A0A1S3CK69 (WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.1e-107
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
           LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE
Sbjct: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180

Query: 181 EEGTSGNGGWGN 193
           EEGTSGNGGWGN
Sbjct: 181 EEGTSGNGGWGN 192

[Close]

BLAST of MELO3C025714 vs. ExPASy TrEMBL
Match: A0A0A0KHT6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD-DHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD  HDHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180
           SLQRE+GEEEAATEVEGGGGRRW+GGD+GTTV EEDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 193
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

[Close]

BLAST of MELO3C025714 vs. ExPASy TrEMBL
Match: A0A6J1FXP0 (putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC111448632 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 150/196 (76.53%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MSP----SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP    ++ TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLP 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD    HHFF  FL HH   L P LP
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDD----HHFFHCFLQHHQRFLPPLLP 120

Query: 121 SPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGS 180
            P+  Q E G E   TEVEG       GGDDG  V EED ETTCGNG+LRTLELFPVR  
Sbjct: 121 LPTHFQGE-GGEGRTTEVEG-------GGDDGMAVGEEDAETTCGNGTLRTLELFPVRAG 180

Query: 181 WVKEEEGTSGNGGWGN 193
           WVKEEEG SGNGGWGN
Sbjct: 181 WVKEEEGGSGNGGWGN 184

[Close]

BLAST of MELO3C025714 vs. ExPASy TrEMBL
Match: A0A6P6FR94 (WUSCHEL-related homeobox 3-like OS=Ziziphus jujuba OX=326968 GN=LOC107404843 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.0e-34
Identity = 84/136 (61.76%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 2   SPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQN 61
           SPSS T SRWCPTPEQ+MILEE+YR G +TPNA+QIQ IT+HLSFYGKIEGKNVFYWFQN
Sbjct: 9   SPSSSTSSRWCPTPEQLMILEEMYRAGTRTPNASQIQQITAHLSFYGKIEGKNVFYWFQN 68

Query: 62  HKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLP---SP 121
           HKARDRQKLRRK+YKQLQQ       Q+    H +HHF  Y      P    QL    SP
Sbjct: 69  HKARDRQKLRRKIYKQLQQ-------QQLLHHHQNHHFLGYSESPSAPAAFQQLACYNSP 128

Query: 122 SSLQRELGEEEAATEV 135
            S   ++G EEA+ ++
Sbjct: 129 VSHIPQVGVEEASPQL 137

[Close]

BLAST of MELO3C025714 vs. ExPASy TrEMBL
Match: A0A5D2ZWI0 (Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G049700v1 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 7.9e-34
Identity = 102/206 (49.51%), Postives = 118/206 (57.28%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           SRWCPTPEQVMILEE+YR+G+KTPNATQIQ ITSHLSFYGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 7   SRWCPTPEQVMILEEMYRSGVKTPNATQIQQITSHLSFYGKIEGKNVFYWFQNHKARERQ 66

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSSLQRELGEE 128
           KLRRKL KQLQ      ++Q F      HH+F   LP    Q L    SP    +++G +
Sbjct: 67  KLRRKLSKQLQ----LQQQQLF------HHYFD-SLPSPPFQHLSYYNSPPPFPQQVGVD 126

Query: 129 EAATEVEGGGGRRW-----------------LGGDDGTTVAEEDGE---------TTCGN 188
           +AA   + G    W                  GGD    V               TT G 
Sbjct: 127 DAAAAAKQGMNYTWKLDVSERMDVDKSMMKIYGGDLLMMVDLSSPSLSSPCFFTTTTTGP 186

[Close]

BLAST of MELO3C025714 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DDHD--HHHFFQY 110
           ARDRQKLR+KL KQL  QQH   ++ Q+                   D H+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of MELO3C025714 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-22
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 3   PSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNH 62
           P  +  SRW PTP+Q+ +LEE+YR G +TP+A  IQ IT+ L  YGKIEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 63  KARDRQKLRRKL 75
           KAR+RQK RR++
Sbjct: 129 KARERQKRRRQM 140

[Close]

BLAST of MELO3C025714 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RW PT EQ+ ILE +Y+ G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 89  TRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148

Query: 69  KLRR 73
           K +R
Sbjct: 149 KQKR 152

[Close]

BLAST of MELO3C025714 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 10  RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
           RW PTPEQ+  LEE+YR+G +TP   QIQ I S L  YG+IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 70  LRRK 74
            RR+
Sbjct: 121 RRRR 124

[Close]

BLAST of MELO3C025714 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
          RW PT EQ+ IL +++R GL+TP   QIQ I++ LSFYGKIE KNVFYWFQNHKAR+RQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83

Query: 70 LRRKLYKQLQQHH 83
           RRK+      HH
Sbjct: 84 -RRKISIDFDHHH 95

The following BLAST results are available for this feature:

BLAST of MELO3C025714 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIB4	2.5e-29	55.12	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
Q5W7C3	3.1e-27	61.06	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q70UV1	2.0e-26	71.43	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
Q6S3I3	2.6e-26	67.47	WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1	[more]
A2XZR3	3.8e-25	58.41	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]

BLAST of MELO3C025714 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463857.1	6.5e-107	100.00	PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]	[more]
XP_004148244.1	3.7e-102	95.85	WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Cs...	[more]
XP_038902731.1	4.7e-81	84.90	WUSCHEL-related homeobox 3-like [Benincasa hispida]	[more]
XP_022944088.1	4.0e-72	76.53	putative WUSCHEL-related homeobox 2 [Cucurbita moschata]	[more]
KAG6570743.1	1.0e-67	73.60	WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C025714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK69	3.1e-107	100.00	WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1	[more]
A0A0A0KHT6	1.8e-102	95.85	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE...	[more]
A0A6J1FXP0	1.9e-72	76.53	putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC11144863...	[more]
A0A6P6FR94	6.0e-34	61.76	WUSCHEL-related homeobox 3-like OS=Ziziphus jujuba OX=326968 GN=LOC107404843 PE=...	[more]
A0A5D2ZWI0	7.9e-34	49.51	Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03...	[more]

BLAST of MELO3C025714 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28610.1	1.8e-30	55.12	Homeodomain-like superfamily protein	[more]
AT3G18010.1	5.2e-22	63.89	WUSCHEL related homeobox 1	[more]
AT1G46480.1	5.8e-21	68.75	WUSCHEL related homeobox 4	[more]
AT2G01500.1	8.4e-20	67.19	Homeodomain-like superfamily protein	[more]
AT3G11260.1	1.4e-19	63.01	WUSCHEL related homeobox 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 6..73 e-value: 4.6E-4 score: 27.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 9..68 e-value: 2.2E-17 score: 62.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 4..69 score: 9.620432
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 10..69 e-value: 3.84363E-4 score: 35.2969
None	No IPR available	GENE3D	1.10.10.60		coord: 10..78 e-value: 1.0E-8 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..164
None	No IPR available	PANTHER	PTHR45940:SF24	WUSCHEL-RELATED HOMEOBOX 3	coord: 1..126
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..126
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025714.1	MELO3C025714.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity