MELO3C025709.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025709.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	zinc finger protein CONSTANS-LIKE 1 isoform X1
Location	chr11: 27311149 .. 27313276 (-)
RNA-Seq Expression	MELO3C025709.jh1
Synteny	MELO3C025709.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGGTGAGGGGAATAAAATTAACTAATGCGACTAAAAAATATATTTGGTGAGACCAACATAACCTCTTTTAGAAAAAAATAAAAATTTATGGATTCAACATATGTATTCAAAGATTTGGGAAAAAAACGTCATAATGTGATGATCATAGGTTTTGGTTGGATATTAGATTCAGGTCCAATGCACTCTGCAAAGGTTGATCATAACTGATGTGACGATGACATTCAATAATATTGTAATTAAAGACAAAAAGTCTATCAGTAACTATACAGATTTTTGTTAATTTTATTCTATCCTTTTAATTTTTATTATATGATTGATTAAAATAAAATAAAAAAAGATTGTGACTTTATTTGAATTTCTGGAAAAATTTATGCCATTAATGAAAGCTAATACAATCATGGTCAACTTAATTCCATGCAAAGGATCATTAGAAAAATGGCCTTTCATGAATCCAAAGAGTTTGTTTTATTATTATTTTTTAAAAAGGGGTCTTGAGTATAATTTTTAAATGACGAATGAGATCAAAAGTAACATATACCATACTATTATTAAAGACAGATGACTAATAAAAATATTCTAATAGTATAGTTTGTGGCCTTGACAAACATTGATCGAATAAGAACATATTAAGTTGTATAAAGATAAGTGAATTAGTGTGTAACTATTTTTGAATGTTTGAAATTGGGTTTTGAATAATTATATTGAAATAATTAATGAGATTGAAAAAATGGCGCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGGTTTCTTTTTTCTCATATTATATTATTCTTTATCTATCTTAATTATTATATAAATGGATTAATTCTTATACAAAGAATAAACAATAATTTCACCTCTTATATATTCTACTATCTACATATTATTTCATAGATTCTAGATGCCAACAACTATATATATCAACTAATATAATTATAATATTTCAATTTCATCTTGATCTTTTTGATTTTGTCACATCTAACTTATATGAGAAACTCCGAAATACCCTTTTTTTATCAATCCTCTCTCTCTCTTTCATTTTAAAGGTTTGAAAGGCCATTTCATCATTTAGAAGAGGGTAACAATGGAAAAGACAGATTTTTTAAAACCATCCCAAAAATGGGTCCAAAAGCCAATTAAGCAACATATTTCATTCAATCAAAATCCTAGATGTGGTTTTTTATGCCTTTTTTTCTATAAATACAATAAATTCAATTCACAAGTAAATGAATCTCTTTTTGTAGGTTACACTCAGCTAATATTATTTGGTTGTTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCA

mRNA sequence

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCA

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPSTNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCGDNWIKYFIDTYSANLIP

Homology

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BLAST of MELO3C025709.jh1 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 479 bits (1234), Expect = 1.13e-170
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of MELO3C025709.jh1 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 473 bits (1217), Expect = 4.25e-168
Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQ KKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQ-KKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of MELO3C025709.jh1 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus])

HSP 1 Score: 427 bits (1098), Expect = 7.28e-150
Identity = 225/248 (90.73%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSE-FSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS+ FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQ+
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWS-HQREEE----QQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQW+ H+REEE    QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

[Close]

BLAST of MELO3C025709.jh1 vs. NCBI nr
Match: KAA0035270.1 (zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 404 bits (1038), Expect = 2.78e-141
Identity = 207/241 (85.89%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRA                               CRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRA-------------------------------CRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of MELO3C025709.jh1 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 365 bits (936), Expect = 2.27e-125
Identity = 204/245 (83.27%), Postives = 214/245 (87.35%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSI-KLWNSEFSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSI KLWNSEFSDSCGDGSP SPP+ L I PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSINKLWNSEFSDSCGDGSPTSPPQSLTIRPS 60

Query: 61  TNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSA----AIDPPINRPLFPAGDF 120
            NNFLLHQSFP L+  SLQSN D FLQRTFSSS SPPPSA    A +  INRPLFPAGDF
Sbjct: 61  NNNFLLHQSFPHLD-PSLQSN-DLFLQRTFSSS-SPPPSASAPTAANRLINRPLFPAGDF 120

Query: 121 QQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKY 180
           Q+   NN+R  ESPVSCESSITI EGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKY
Sbjct: 121 QR---NNQRA-ESPVSCESSITI-EGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKY 180

Query: 181 ACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCGDNWIKYFIDTYS 240
           ACRKSLADSRPRIRGRFARYND+VVKNYP+QWSH +EEEQ  EAN+CGDNWIKYFID YS
Sbjct: 181 ACRKSLADSRPRIRGRFARYNDDVVKNYPMQWSHGQEEEQ--EANNCGDNWIKYFIDAYS 234

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 145 ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.8e-06
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 141 GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 96  PPSAAIDPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEG--MSRACRYSPEEK 155
           P S  ID P +R L PAG                     +I +  G  +  +  +S  ++
Sbjct: 288 PDSTVIDMPNSRILTPAG---------------------AINLFSGPSLQMSLHFSSMDR 347

Query: 156 KERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           + R+ RYR K+  R F K I+Y  RK+ A++RPRI+GRFA+ +D
Sbjct: 348 EARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSD 370

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 152 EKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           +++ R+ RYR KR  R F K I+YA RK+ A++RPRI+GRFA+ +D
Sbjct: 267 DREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.2e-05
Identity = 45/152 (29.61%), Postives = 67/152 (44.08%), Query Frame = 0


Query: 53  PLKIHPSTNNFLLHQSFPLL----NHDSLQSNNDSFLQRTFSSSLS---PPPSAAIDPPI 112
           PL+I  S   +   Q+F L     +  +L+S+N S       SS+     P S   D  +
Sbjct: 201 PLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATV 260

Query: 113 NRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRN 172
           + P  P                       ++T       A   SP +++ R+ RYR K+ 
Sbjct: 261 SNPRSP----------------------KAVTDQPPYPPAQMLSPRDREARVLRYREKKK 320

Query: 173 QRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
            R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 321 MRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 5.46e-171
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 5.46e-171
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 473 bits (1217), Expect = 2.06e-168
Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQ KKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQ-KKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 3.53e-150
Identity = 225/248 (90.73%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSE-FSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS+ FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQ+
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWS-HQREEE----QQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQW+ H+REEE    QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

[Close]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SW55 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00610 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 1.35e-141
Identity = 207/241 (85.89%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRA                               CRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRA-------------------------------CRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQ-REANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEEQQ REANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of MELO3C025709.jh1 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-24
Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 102 DPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYR 161
           D P+ R L  AGD  +    + R + S V  ES+  IIEGMS+A +YSPEEKKE+IE+YR
Sbjct: 118 DGPVRRAL-SAGDLPR----SSRRESSTVWSESN-AIIEGMSKAYKYSPEEKKEKIEKYR 177

Query: 162 TKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANS 221
           +KRN RNFNK+IKY CRK+LADSRPRIRGRFAR NDE+        S Q + +       
Sbjct: 178 SKRNLRNFNKRIKYECRKTLADSRPRIRGRFAR-NDEI--------SQQEQVDVMEAVVG 237

Query: 222 CGDNWIKYFIDTYSAN 238
             D W   F+D++SAN
Sbjct: 238 DVDTWAS-FLDSFSAN 237

[Close]

BLAST of MELO3C025709.jh1 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-19
Identity = 57/113 (50.44%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 107 RPLFPAGDFQQ--KKNNNERGDESPVSCESSITII----EGMSRACRYSPEEKKERIERY 166
           R ++  GD Q   +    +R   SP++ ESS T +    E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 167 RTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREE 214
           R KR QRNF K IKYACRK+LAD+RPR+RGRFAR NDEV +N  +  S  R+E
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR-NDEVFENPKIASSFTRQE 251

[Close]

BLAST of MELO3C025709.jh1 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 68  SFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKNNNERGDE 127
           + P+++  +L  NN S  +  F SS              R ++  GD Q         + 
Sbjct: 147 NIPMMDSSNLSYNNLSSPENAFFSSQM------------RRVYSTGDLQNNMEMQRSSEN 206

Query: 128 S--PVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSR 187
           S  P S E +        +  RYS EE+KE+I +YR KRNQRNF K IKYACRK+LADSR
Sbjct: 207 STMPFSEEQNF-------KVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSR 262

Query: 188 PRIRGRFARYNDEVVK 202
           PRIRGRFAR NDEVV+
Sbjct: 267 PRIRGRFAR-NDEVVE 262

[Close]

BLAST of MELO3C025709.jh1 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 81.6 bits (200), Expect = 9.2e-16
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 104 PINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTK 163
           P  +PLF     +Q   N+E G ++           E  ++  RYS EE+K+RI RY  K
Sbjct: 101 PEIKPLFRPATGEQSWGNSEGGIQA-----------EPNTKVGRYSVEERKDRIMRYLKK 160

Query: 164 RNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCG 223
           +NQRNFNK IKY CRK+LAD R R+RGRFAR ND   +   +  +H    E++ +  S  
Sbjct: 161 KNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSEKEEDMFSGS 213

Query: 224 DNWI 228
           D+++
Sbjct: 221 DDYL 213

[Close]

BLAST of MELO3C025709.jh1 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-15
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 142 MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVK 201
           +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ ++    
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEP 359

Query: 202 NYPVQWSHQREEEQ 216
           N     SH  +E++
Sbjct: 360 NRQAFSSHHDDEDE 373

The following BLAST results are available for this feature:

BLAST of MELO3C025709.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463852.1	1.13e-170	98.76	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK143...	[more]
XP_008463853.1	4.25e-168	98.34	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
XP_011657240.1	7.28e-150	90.73	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical p...	[more]
KAA0035270.1	2.78e-141	85.89	zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038902180.1	2.27e-125	83.27	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]

BLAST of MELO3C025709.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	1.3e-06	52.83	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	3.8e-06	49.12	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9FDX8	8.4e-06	33.65	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=...	[more]
O82117	2.4e-05	52.17	Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=...	[more]
O50055	4.2e-05	29.61	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]

BLAST of MELO3C025709.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRZ2	5.46e-171	98.76	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK62	5.46e-171	98.76	zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3CK56	2.06e-168	98.34	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KG14	3.53e-150	90.73	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV...	[more]
A0A5A7SW55	1.35e-141	85.89	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of MELO3C025709.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	7.0e-24	52.21	CCT motif family protein	[more]
AT1G63820.1	1.8e-19	50.44	CCT motif family protein	[more]
AT5G41380.1	2.2e-17	44.12	CCT motif family protein	[more]
AT3G12890.1	9.2e-16	40.32	activator of spomin::LUC2	[more]
AT2G33350.1	2.7e-15	54.05	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 154..194 e-value: 2.9E-17 score: 62.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 153..195 score: 15.417831
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..132
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 60..235
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 60..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025709.jh1.t1	MELO3C025709.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding