MELO3C025600.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025600.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	pre-mRNA-splicing factor CWC22 homolog
Location	chr07: 4509197 .. 4510281 (-)
RNA-Seq Expression	MELO3C025600.jh1
Synteny	MELO3C025600.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACCAAATGACGATGTAGACGAAAATAGAATTAAATTCATTGTGTTTTTTTACCTTCAATTTCCCTCCACGATGGAGTCTCGCCGGGAAAATGGCTCCTCCGCTGAGATCTTTTCCTTTCCGAGCACTCCAGTTCAGGATCAGGATTCCGACGATTTCGAATTTGGATCGATTACTCCTGATTCTCCTTCCACTTTCAACAATTCTCCTGCTGATCATTTGTTCGTCAATGGCCGTCTCTTGCCGCACTCTTTTCCTCCACAGCCGATTAGTGTTTACGCTGTTGATGTTGCTTCTCGTCAGACCAGCAGAACGAGTAGTGTCGGGAGTAAGGACTCGTTCTTGTCGTCCCGAAGTAATAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATAATAGTAATAATAATTTGGAAATCAGATCCTCGAGATTCTCTTCGTATCAGAAGAAATCGCAGAAATCTTCTGTTTCCGCTCAAGTGTACGGATCGTGTCAGAGATGGCAGTTCATTGCATCGGTGTCTGTACCGACGTCGCTGAGTCGGGAGAATTCGAGAAGGAAGAAATCTGTGGAGAAAATTGGAGGAAAATCGGATTTGAGGAGGAATAAGAGGCGGACGGAGAAAACATCGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATACTGGTTTGTAAGGAATGTCATGCGATCGAACCATCGAGGAAGGATGAGATTGCGAGGAAGTCGAAATTGACGACGACAACGACGACGAAGCCGCAGAGTAATTGAATTTAATTATTGATTAATAGTTTCTTCTGGATTTTGCCTCTTGCTGATGATATATGATCTGGTTTTTCATCTCTCTCTTGATTTCGGGAAGTTTCTTTTCTTCAATTGTTGGCGTTTTTTTGTTGATATGAATATGATCTCTCTCTCTCCTCTCTTTACAATGTTGAGTAGCAGAGAATTAAAGTTTGTTAATAATTTGTAATGATATATAAGAATTGAAGATGATCTA

mRNA sequence

ATGCAAACCAAATGACGATGTAGACGAAAATAGAATTAAATTCATTGTGTTTTTTTACCTTCAATTTCCCTCCACGATGGAGTCTCGCCGGGAAAATGGCTCCTCCGCTGAGATCTTTTCCTTTCCGAGCACTCCAGTTCAGGATCAGGATTCCGACGATTTCGAATTTGGATCGATTACTCCTGATTCTCCTTCCACTTTCAACAATTCTCCTGCTGATCATTTGTTCGTCAATGGCCGTCTCTTGCCGCACTCTTTTCCTCCACAGCCGATTAGTGTTTACGCTGTTGATGTTGCTTCTCGTCAGACCAGCAGAACGAGTAGTGTCGGGAGTAAGGACTCGTTCTTGTCGTCCCGAAGTAATAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATAATAGTAATAATAATTTGGAAATCAGATCCTCGAGATTCTCTTCGTATCAGAAGAAATCGCAGAAATCTTCTGTTTCCGCTCAAGTGTACGGATCGTGTCAGAGATGGCAGTTCATTGCATCGGTGTCTGTACCGACGTCGCTGAGTCGGGAGAATTCGAGAAGGAAGAAATCTGTGGAGAAAATTGGAGGAAAATCGGATTTGAGGAGGAATAAGAGGCGGACGGAGAAAACATCGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATACTGGTTTGTAAGGAATGTCATGCGATCGAACCATCGAGGAAGGATGAGATTGCGAGGAAGTCGAAATTGACGACGACAACGACGACGAAGCCGCAGAGTAATTGAATTTAATTATTGATTAATAGTTTCTTCTGGATTTTGCCTCTTGCTGATGATATATGATCTGGTTTTTCATCTCTCTCTTGATTTCGGGAAGTTTCTTTTCTTCAATTGTTGGCGTTTTTTTGTTGATATGAATATGATCTCTCTCTCTCCTCTCTTTACAATGTTGAGTAGCAGAGAATTAAAGTTTGTTAATAATTTGTAATGATATATAAGAATTGAAGATGATCTA

Coding sequence (CDS)

ATGGAGTCTCGCCGGGAAAATGGCTCCTCCGCTGAGATCTTTTCCTTTCCGAGCACTCCAGTTCAGGATCAGGATTCCGACGATTTCGAATTTGGATCGATTACTCCTGATTCTCCTTCCACTTTCAACAATTCTCCTGCTGATCATTTGTTCGTCAATGGCCGTCTCTTGCCGCACTCTTTTCCTCCACAGCCGATTAGTGTTTACGCTGTTGATGTTGCTTCTCGTCAGACCAGCAGAACGAGTAGTGTCGGGAGTAAGGACTCGTTCTTGTCGTCCCGAAGTAATAGCACTAATAGTAGGAGCAGTAGCAGTTGCGGTAGCAGTACTAGCGCGAGGACGAGTTCGAGCGATAATAATAATAGTAATAATAATTTGGAAATCAGATCCTCGAGATTCTCTTCGTATCAGAAGAAATCGCAGAAATCTTCTGTTTCCGCTCAAGTGTACGGATCGTGTCAGAGATGGCAGTTCATTGCATCGGTGTCTGTACCGACGTCGCTGAGTCGGGAGAATTCGAGAAGGAAGAAATCTGTGGAGAAAATTGGAGGAAAATCGGATTTGAGGAGGAATAAGAGGCGGACGGAGAAAACATCGACGGCGAGGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATATGTGGTTCGGAAGGAAGGTTTTCCGGTGGATTATACTGGTTTGTAAGGAATGTCATGCGATCGAACCATCGAGGAAGGATGAGATTGCGAGGAAGTCGAAATTGACGACGACAACGACGACGAAGCCGCAGAGTAATTGA

Protein sequence

MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNNNSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVEKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKDEIARKSKLTTTTTTKPQSN

Homology

[Close]

BLAST of MELO3C025600.jh1 vs. NCBI nr
Match: XP_008463678.1 (PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo] >KAA0066822.1 putative membrane-associated kinase regulator 1 [Cucumis melo var. makuwa] >TYK27969.1 putative membrane-associated kinase regulator 1 [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1185), Expect = 1.38e-162
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE
Sbjct: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240

Query: 241 EIARKSKLTTTTTTKPQSN 259
           EIARKSKLTTTTTTKPQSN
Sbjct: 241 EIARKSKLTTTTTTKPQSN 259

[Close]

BLAST of MELO3C025600.jh1 vs. NCBI nr
Match: XP_011654065.1 (probable membrane-associated kinase regulator 3 [Cucumis sativus] >KGN55114.1 hypothetical protein Csa_011965 [Cucumis sativus])

HSP 1 Score: 428 bits (1100), Expect = 1.19e-149
Identity = 248/259 (95.75%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRENGSSAEIFSFPSTPV DQDSD FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 3   MESRRENGSSAEIFSFPSTPVLDQDSD-FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 62

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPISVYAVD+ASRQTSRTSSVGSKDSF+SSRSNSTNSRSSSSCGSSTSARTSSSDN+
Sbjct: 63  FPPQPISVYAVDLASRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNS 122

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           N+NNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE
Sbjct: 123 NNNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 182

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRR KRR EKTSTARKKKKKKKKK NMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 183 KIGGKSDLRRKKRRAEKTSTARKKKKKKKKK-NMWFGRKVFRWIILVCKECHAIEPSRKD 242

Query: 241 EIARKSKLTTTTTTKPQSN 259
           EIARKSKLTT TT KPQSN
Sbjct: 243 EIARKSKLTTMTT-KPQSN 258

[Close]

BLAST of MELO3C025600.jh1 vs. NCBI nr
Match: XP_038899281.1 (probable membrane-associated kinase regulator 1 [Benincasa hispida])

HSP 1 Score: 394 bits (1013), Expect = 1.97e-136
Identity = 233/261 (89.27%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRE  SS EIFSFPSTPVQDQDSD FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1   MESRREKSSSGEIFSFPSTPVQDQDSD-FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPI VY VDV SRQTSRTSSVGSKDSF+SSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61  FPPQPIGVYTVDV-SRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           N  NN++IRSSRFSSYQKKSQKSSVSAQVYGS QRWQFIASVSVP +LSRENSRRKKSVE
Sbjct: 121 N--NNVDIRSSRFSSYQKKSQKSSVSAQVYGSSQRWQFIASVSVPVTLSRENSRRKKSVE 180

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRR KRRTEKTSTARKKKKKKKKK NMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRKKRRTEKTSTARKKKKKKKKK-NMWFGRKVFRWIILVCKECHAIEPSRKD 240

Query: 241 EIARKSKL---TTTTTTKPQS 258
           E+ RK ++   T +TTTKP+S
Sbjct: 241 EVVRKDEIVRKTKSTTTKPKS 256

[Close]

BLAST of MELO3C025600.jh1 vs. NCBI nr
Match: XP_023525336.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885.1 hypothetical protein SDJN03_01227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037411.1 hypothetical protein SDJN02_01037, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (920), Expect = 1.85e-122
Identity = 213/251 (84.86%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSD-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
           MESRRE  SS EIFSFPSTPVQDQD D DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1   MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60

Query: 61  SFPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDN 120
           SFPPQPI VYAVD       RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSS++
Sbjct: 61  SFPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSES 120

Query: 121 NNSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSV 180
           NN       RSSRFSS+QKKS KSSVSAQVYGS QRWQFIASV VPT+LSRENSRRKK+V
Sbjct: 121 NN-----VDRSSRFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAV 180

Query: 181 EKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 240
           EKIGGKSDLRRNK+RTEKT+  +KKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK
Sbjct: 181 EKIGGKSDLRRNKKRTEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 239

Query: 241 DEIA-RKSKLT 249
           DEI  RK+KLT
Sbjct: 241 DEIVMRKTKLT 239

[Close]

BLAST of MELO3C025600.jh1 vs. NCBI nr
Match: XP_022941070.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])

HSP 1 Score: 356 bits (914), Expect = 1.51e-121
Identity = 212/251 (84.46%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSD-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
           MESRRE  SS EIFSFPSTPVQDQD D DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1   MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60

Query: 61  SFPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDN 120
           SFPPQPI VYAVD       RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSS++
Sbjct: 61  SFPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSES 120

Query: 121 NNSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSV 180
           NN       RSSRFSS+QKKS KSSVSAQVYGS QRWQFIASV VPT+LSRENSRRKK+V
Sbjct: 121 NN-----VDRSSRFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAV 180

Query: 181 EKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 240
           EKIGGKSDLRRNK+R EKT+  +KKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK
Sbjct: 181 EKIGGKSDLRRNKKRIEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 239

Query: 241 DEIA-RKSKLT 249
           DEI  RK+KLT
Sbjct: 241 DEIVMRKTKLT 239

[Close]

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DWZ9 (Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001730 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 6.68e-163
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE
Sbjct: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240

Query: 241 EIARKSKLTTTTTTKPQSN 259
           EIARKSKLTTTTTTKPQSN
Sbjct: 241 EIARKSKLTTTTTTKPQSN 259

[Close]

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CKA5 (probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC103501769 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 6.68e-163
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN
Sbjct: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE
Sbjct: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240

Query: 241 EIARKSKLTTTTTTKPQSN 259
           EIARKSKLTTTTTTKPQSN
Sbjct: 241 EIARKSKLTTTTTTKPQSN 259

[Close]

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L251 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 5.76e-150
Identity = 248/259 (95.75%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 60
           MESRRENGSSAEIFSFPSTPV DQDSD FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS
Sbjct: 3   MESRRENGSSAEIFSFPSTPVLDQDSD-FEFGSITPDSPSTFNNSPADHLFVNGRLLPHS 62

Query: 61  FPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDNN 120
           FPPQPISVYAVD+ASRQTSRTSSVGSKDSF+SSRSNSTNSRSSSSCGSSTSARTSSSDN+
Sbjct: 63  FPPQPISVYAVDLASRQTSRTSSVGSKDSFMSSRSNSTNSRSSSSCGSSTSARTSSSDNS 122

Query: 121 NSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 180
           N+NNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE
Sbjct: 123 NNNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSVE 182

Query: 181 KIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRKD 240
           KIGGKSDLRR KRR EKTSTARKKKKKKKKK NMWFGRKVFRWIILVCKECHAIEPSRKD
Sbjct: 183 KIGGKSDLRRKKRRAEKTSTARKKKKKKKKK-NMWFGRKVFRWIILVCKECHAIEPSRKD 242

Query: 241 EIARKSKLTTTTTTKPQSN 259
           EIARKSKLTT TT KPQSN
Sbjct: 243 EIARKSKLTTMTT-KPQSN 258

[Close]

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FSH9 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111446467 PE=4 SV=1)

HSP 1 Score: 356 bits (914), Expect = 7.33e-122
Identity = 212/251 (84.46%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSD-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
           MESRRE  SS EIFSFPSTPVQDQD D DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1   MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60

Query: 61  SFPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDN 120
           SFPPQPI VYAVD       RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSS++
Sbjct: 61  SFPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSES 120

Query: 121 NNSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSV 180
           NN       RSSRFSS+QKKS KSSVSAQVYGS QRWQFIASV VPT+LSRENSRRKK+V
Sbjct: 121 NN-----VDRSSRFSSHQKKSPKSSVSAQVYGSSQRWQFIASVPVPTTLSRENSRRKKAV 180

Query: 181 EKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 240
           EKIGGKSDLRRNK+R EKT+  +KKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK
Sbjct: 181 EKIGGKSDLRRNKKRIEKTTARKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSRK 239

Query: 241 DEIA-RKSKLT 249
           DEI  RK+KLT
Sbjct: 241 DEIVMRKTKLT 239

[Close]

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J3G5 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480935 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 6.40e-118
Identity = 211/252 (83.73%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MESRRENGSSAEIFSFPSTPVQDQDSD-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60
           MESRRE  SS EIFSFPSTPVQDQD D DFEFGSITPDSPSTFNNSPADHLFVNGRLLPH
Sbjct: 1   MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPH 60

Query: 61  SFPPQPISVYAVDVASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSARTSSSDN 120
           SFPPQPI VYAVD       RTSSVGSKDS +SSRSNSTNSRSSSSCGSSTSARTSSS++
Sbjct: 61  SFPPQPIGVYAVD-------RTSSVGSKDSIMSSRSNSTNSRSSSSCGSSTSARTSSSES 120

Query: 121 NNSNNNLEIRSSRFSSYQKKSQKSSVSAQVYGSCQRWQFIASVSVPTSLSRENSRRKKSV 180
           NN       RSSRFSS+QKKS KSSVSAQVYGS QRWQFIASV  P +LSRENSRRKK+V
Sbjct: 121 NN-----VDRSSRFSSHQKKSPKSSVSAQVYGSSQRWQFIASV--PATLSRENSRRKKAV 180

Query: 181 EKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKK-NMWFGRKVFRWIILVCKECHAIEPSR 240
           EKIGGKSDLRRNK+RTEKT+  +KKKKKKKKKK NMWFGRKVFRWIILVCKECHAIEPSR
Sbjct: 181 EKIGGKSDLRRNKKRTEKTTARKKKKKKKKKKKKNMWFGRKVFRWIILVCKECHAIEPSR 238

Query: 241 KDEIA-RKSKLT 249
           KDEI  RK+KLT
Sbjct: 241 KDEIVMRKTKLT 238

[Close]

BLAST of MELO3C025600.jh1 vs. TAIR 10
Match: AT3G15250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits to 218 proteins in 63 species: Archae - 0; Bacteria - 22; Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 87/248 (35.08%), Postives = 118/248 (47.58%), Query Frame = 0


Query: 19  TPVQDQDSDDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPISVYAVDVAS 78
           T   D+   +FEFGS+TP SPS      NSPADHLF NGRLLPH+FP           +S
Sbjct: 7   TTNSDEPPPEFEFGSLTPTSPSQDSFSENSPADHLFFNGRLLPHAFPA---------ASS 66

Query: 79  RQTSRTSSVGSKDSFLSSRSNSTNSRS---SSSCGSSTSARTSSSDNNNSNNNLE----- 138
             T R  S+ S  S  +SR NSTNS S   S++  +S S RTS S +N +N+ +      
Sbjct: 67  IYTKR--SISSTTSEYTSRCNSTNSSSSFGSNNSSTSQSPRTSYSTSNKNNSPINQEPLD 126

Query: 139 ----------------IRSSRFSSYQKKSQK----SSVSAQVYGSCQRWQFIASVSVPTS 198
                           + SS +SS Q K +K    ++ S     S QRWQ+I  V V   
Sbjct: 127 LKLKPPISRCDKTVNTMSSSSYSSPQHKRRKAMEMATTSLYRSYSSQRWQYITPVPV--- 186

Query: 199 LSRENSRRKKSVEKIGGKSDLRRNKRRTEKTSTARKKKKKKKKKKNMWFGRKVFRWIILV 236
                  R     ++GG         R +K    RKK ++++  + M   RK+    I V
Sbjct: 187 -------RMSGGIRVGG---------RKKKAVRVRKKTEERRVSRVMKLWRKLLMAAIFV 224

[Close]

BLAST of MELO3C025600.jh1 vs. TAIR 10
Match: AT1G53163.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15250.1); Has 315 Blast hits to 216 proteins in 74 species: Archae - 0; Bacteria - 86; Metazoa - 43; Fungi - 52; Plants - 27; Viruses - 1; Other Eukaryotes - 106 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-11
Identity = 95/311 (30.55%), Postives = 142/311 (45.66%), Query Frame = 0


Query: 2   ESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPST---FNNSPADHLFVNGRLLP 61
           ++R+   +S E  + P T ++   S DFEFGS+TP SPS      NSPADHLF+NGRLLP
Sbjct: 3   DNRKTTPNSGE--TKPETSLETSLSSDFEFGSLTPTSPSQDPFSENSPADHLFLNGRLLP 62

Query: 62  HSFPPQPISVYAVD-VASRQTSRTSSVGSKDSFLSSRSNSTNSRSSSSCGSSTSART--- 121
           HSFP   I+  +V    S  T R+ S  S+ S  SS ++ T   S+ +    TS+ T   
Sbjct: 63  HSFPTSTITTRSVSRTTSENTFRSDSWSSRSSDSSSPTSYTPRTSTCNIFKITSSSTGHG 122

Query: 122 ---------------------SSSDNNNS----------------------NNNLEIRSS 181
                                +SS   N+                       N   + ++
Sbjct: 123 KETNITCFGTRSEEIMCLRPATSSKKTNTCISKEYYHKPSLILDLKKRPPVENGKAVNTT 182

Query: 182 RFSSY----QKKSQKSSVSAQVYGS-CQRWQFIASVSVPTSLSRENSRRKKSVE-KIGGK 241
              SY    ++K     V+AQ+YGS  +RWQ I  V       RE S + K    K+GG+
Sbjct: 183 NKVSYLPQCKRKKATEIVTAQLYGSYSRRWQHITPV-----FKREGSVKSKGGGIKVGGR 242

Query: 242 SDLRRNKRRTEKTSTARKKKKKKKKK-----KNMWFGRKVFRWIILVCKECHAIEPSR-- 249
                     +K ST RKK KK +++     K M + +++ + ++  C+ECHA+EP +  
Sbjct: 243 ----------KKKSTRRKKPKKAEERRGISSKLMKWWKRILKAVVFACRECHAMEPHQIL 296

The following BLAST results are available for this feature:

BLAST of MELO3C025600.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463678.1	1.38e-162	100.00	PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo] >KAA00...	[more]
XP_011654065.1	1.19e-149	95.75	probable membrane-associated kinase regulator 3 [Cucumis sativus] >KGN55114.1 hy...	[more]
XP_038899281.1	1.97e-136	89.27	probable membrane-associated kinase regulator 1 [Benincasa hispida]	[more]
XP_023525336.1	1.85e-122	84.86	pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885....	[more]
XP_022941070.1	1.51e-121	84.46	pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]	[more]

BLAST of MELO3C025600.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C025600.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DWZ9	6.68e-163	100.00	Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CKA5	6.68e-163	100.00	probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L251	5.76e-150	95.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1	[more]
A0A6J1FSH9	7.33e-122	84.46	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J3G5	6.40e-118	83.73	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114809...	[more]

BLAST of MELO3C025600.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15250.1	1.7e-12	35.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G53163.1	2.5e-11	30.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025600.jh1.t1	MELO3C025600.jh1.t1	mRNA