MELO3C025561 (gene) Melon (DHL92) v4

Overview
NameMELO3C025561
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmitochondrial import inner membrane translocase subunit tim16
Locationchr12: 13181676 .. 13184715 (+)
RNA-Seq ExpressionMELO3C025561
SyntenyMELO3C025561
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGGTCTGTTCTATTTTTCTTCGCTTTCTTACGTTATTATTATTATTTTCTTTTTATTCTTTACAATCCTCTTTCTTCATTATTCTTGCCCATTTTTCTTCCTTAGCTCCCCATCATTAATCTCATCTTCTTCCTCTTCTCTCTCTTTTCCATCTATAATTCAACAATCTTCCCCAATTTTATTTTCAAATCTTGCCAGATTAAGTTTCGTGTCTTGTGGGGTTCATACGTTCGCCCATCCTTAAGTATCCACAATTCTTTTTCTTTTTTCTAGGTTAGATATCCATATTGAATGATATTTCAATTTCTAATCCAAATATTTTATCTGAGATTTTAAACCCCAAATAAAACGAAATAACCCCTAAGATTCCTTGCATGGTTGATTAAATAGCTTCTCTGGTTGATTTTGCAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGGTATATCTCTTCTTTCTTTCTCTCCTCTCTTTTAACTTGATGGGGGATTGGTTACCAAGATAAGGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATATTTTGTTAATCTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTTGGGGAAAGACTACAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCATATTAAATCTTATTTTTCTTTTTTTCCCTCCTATGTATTTGTCTAGATATGTTGGGTTCTTTGTGAAATGATACGATTTTCTTGTCCTCTCCACTTTTTATAGTATCTAAAGTTAAGCATATTATCCTATTTATATATCACTTGTGTCATGTCATGTTATGTACTGTGTACTTCGCCATATATATATTTTATCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTGTGTTGGTGAATTAGAGGAGTGGATATGCATAATTTTTGAAGTTAGTCTTTTTCAGTTTGAGAACTTCCTATAAGAGAAGCTCTTTGCTTATATATTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTATACTCTTTTTTATTCCACCATTTTTCCCCCTCCTATCACAAATTGGCCAATTTTTCCTCGATATCATTTTTATTGGTGTAAAATGTTTACGGCTGGCTTGATGGAAACTTGACTTATAGAACAAAAGAAACTTTCACCTTGTCCTTGAACTATTAGAAGCTATAATTATAATGCAAATGCCAACTTGGGATGTTTAAGTGTTTTGGCAATACAAAGTTCTGTGTGCACATAGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCCTTCTCATCTTCTTAACCTTGAATAGTGTCTTAGATCTTCGGCAAGTGGTCAAAAGAATTTGTTATTTTTCTATCCTGTGACATGAACTAGCGATTTGCAAACAAAAAAAAAAAAGGATCGCTTGTCCCACCAACTTTTTAAGTTGGTGTAAACAGCTTAACTTCAATACTAAACATGATTGAAATTTGGACATTTATTGAGTCATCTTTCCCTATTTTTCTATTTTTCACAGTTATTGAGGAACTCCATCTTCTCTCTATCTCTACTTTTCACATTTGTTAAATACTCTACATTCTCCTCCTTCTCCTATTAGAGCGTGATCCTTGATTCTTCTCTATTGGTAATGGAAATTCTCTTGTTACTAATTGTGGATTAGTGAGCATCTCTCTTAAATCCTTCTGCCTATATAATAAAAGAAAGTAGTGAGGAGAGTGCCAACTCCAACCCCGAGGGACGTTGGAAGGATGAGATGGCACCCCATTCGTTGTAGATGTTTTTATCCATCTTCTCGACAGCATGTCCTAGACGTAGCTCCTTCGTACTGACCTTATCTCTGACAAGCAGAGCGGTATAATCATTAGTTCTCTTTTAACAAATAATCATTAAGTCTTTTTGTTGACAAATAGATATAAAAACTTTGACTGTTCATGGCCTGGATGATAGCATCCTGCAGTTCCATCCTTAGGGCACCCTTGGAGAAAATGCTTTGATTGAACACGTACTTTATTAGTTTGAACAAAGTTCGTTGTTTATACACATCTTTTACTCATTAATTAATTAATGGGAGAGAGGTTGCCACATGTAGTTGTAGTTGATTATGCTTAGTATCAAGTTTTCTTTTGTGTGCTGTAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGGTCAAATATCTATTGCTTTTCACTAAAATAGTTCCACCCATATATAGATTTTTGACAATCCTTCTCTCACCTATGTAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTTATACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

mRNA sequence

AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGGTATATCTCTTCTTTCTTTCTCTCCTCTCTTTTAACTTGATGGGGGATTGGTTACCAAGATAAGGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATATTTTGTTAATCTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTTGGGGAAAGACTACAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCATATTAAATCTTATTTTTCTTTTTTTCCCTCCTATGTATTTGTCTAGATATGTTGGGTTCTTTGTGAAATGATACGATTTTCTTGTCCTCTCCACTTTTTATAGTATCTAAAGTTAAGCATATTATCCTATTTATATATCACTTGTGTCATGTCATGTTATGTACTGTGTACTTCGCCATATATATATTTTATCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTGTGTTGGTGAATTAGAGGAGTGGATATGCATAATTTTTGAAGTTAGTCTTTTTCAGTTTGAGAACTTCCTATAAGAGAAGCTCTTTGCTTATATATTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTTATACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

Coding sequence (CDS)

ATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Homology
[Close]
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQILGVTE+T WE
Sbjct: 12  MGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQILGVTEKTSWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+ +G   PS
Sbjct: 72  EILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQILGVTE++ W+
Sbjct: 12  MGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQILGVTEKSSWD 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 98
           E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 72  EILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETP 60
           MG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+QIL ++  TP
Sbjct: 11  MGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQILNISTLTP 70

Query: 61  WEEVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQ 102
            EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+    I  Q
Sbjct: 71  -EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLDEELSINQQ 114

[Close]
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match: Q9C1W5 (Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pam16 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.9e-09
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNT---VRRASKVMTEQEARQILGVTEET 60
           +GS ++++AFVQAY+Q +ANA++    Q     +   VRR    MT QEA  IL +  E+
Sbjct: 13  VGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGE--MTIQEAGSILNIKPES 72

Query: 61  PWE-EVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQD 103
             E E+ K++  +FE N   + GSFYLQSKV RA E+L++    K Q+
Sbjct: 73  LEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKSELDQKIQE 118

[Close]
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQILGVTEETP 60
           MG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+QIL V++ +P
Sbjct: 11  MGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQILNVSKLSP 70

Query: 61  WEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQIKGQD 103
            EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   +I+ Q+
Sbjct: 71  -EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Sbjct: 72  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: KAA0035623.1 (mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa] >TYK30919.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 7.0e-47
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 67  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 126

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 127 EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: XP_004139541.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >XP_011655013.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_013024 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: KAG7011201.1 (Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-45
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match: A0A1S3CJP3 (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Sbjct: 72  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.4e-47
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 67  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 126

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 127 EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match: A0A0A0LW69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.9e-47
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match: A0A6J1EF52 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432719 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match: A0A6J1HHA5 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464057 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.4e-45
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQILG+T ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQILGVTE+T WE
Sbjct: 12  MGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQILGVTEKTSWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+ +G   PS
Sbjct: 72  EILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of MELO3C025561 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 127.1 bits (318), Expect = 8.3e-30
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQILGVTE++ W+
Sbjct: 12  MGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQILGVTEKSSWD 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 98
           E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 72  EILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of MELO3C025561 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 127.1 bits (318), Expect = 8.3e-30
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0 

Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQILGVTE++ W+
Sbjct: 12  MGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQILGVTEKSSWD 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 98
           E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 72  EILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

The following BLAST results are available for this feature:
BLAST of MELO3C025561 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VV92.2e-3573.33Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
Q93W661.2e-2872.16Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
Q6PBL03.5e-0943.81Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
Q9C1W57.9e-0941.67Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharom... [more]
Q9CQV11.0e-0842.45Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
BLAST of MELO3C025561 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463624.11.1e-47100.00PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
KAA0035623.17.0e-4799.05mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var.... [more]
XP_004139541.12.0e-4698.10mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sa... [more]
KAG7011201.13.0e-4595.24Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [C... [more]
XP_022925423.16.6e-4594.29mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
BLAST of MELO3C025561 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CJP35.3e-48100.00mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX... [more]
A0A5D3E4Y73.4e-4799.05Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va... [more]
A0A0A0LW699.9e-4798.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1[more]
A0A6J1EF523.2e-4594.29mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
A0A6J1HHA55.4e-4593.33mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
BLAST of MELO3C025561 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59280.11.6e-3673.33Protein Transporter, Pam16 [more]
AT5G61880.18.3e-3072.16Protein Transporter, Pam16 [more]
AT5G61880.28.3e-3072.16Protein Transporter, Pam16 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 1..102
e-value: 1.5E-20
score: 73.5
NoneNo IPR availablePANTHERPTHR12388:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1coord: 1..99
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 42..99
e-value: 1.1E-21
score: 78.4
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025561.1MELO3C025561.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex