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MELO3C025336 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTCTAGGGTTAGAATTTCTCATCTTAGTAAAAAAGTTTAGTATAATAAACTAATTTATTATTATTTTTTTTCAAACAAAATGAGAAAAATGGTAAACGTGGGAGTAAATGAAATGGGGAGAAAAAAGAAATGCGGGTGAGAGAGTTCGATAATTTCATAAATCGAAAGGATAATTTAGCGGAGGAAACAGTGACGCCGTGGTGCGGAGAGAAAATAAGAGGCGGTCCGGTGTCCATCTACTCTTGTGGCGGCTATTTCATTTTGGTGGAATCGGCCACCAGCAGATTCAGTAAGACTCGAGCCGTCACCTCAAGGTCGAGGAAGTTCATGGCGTCGATATCCCTTTTCAGCTCTAAAACCCTAGTCTCACCATCGGCGACCTACCTACGGATATCTTCTTCTTCATCTACAAGTCATAGTTGCTGTCTTGGTGGCTGCAGATGCTCCTTCCCAATCAAGCCGCTTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTTGATTTCCCTATTGTATCTTTCTCACTCTTTTCCTCCTTTATTTTCCTGCAGCATTTTATGTTTTTTTTTTCGTCTTGCAATGGAATTCTTTTTTGTGAGATTTTGGTGCTTTTGCTTCCCGTTTTTAATTACTTTTGCTACTCTACCCCTAGATTAGTTAGGGGTGGATAATTGAAGCATTTCTTGGAATTGTTATAGTTATTGTCATTTTTTTATCTATGAAGGTTTTAGAAGGCTTATTCGTGACTTATCCTACCACGTTTTTCCTGGAAATTGTATCTGCCTGCTTGTTTCGGCTATGTCTGCATTTTTGTTGTTAAACTTTGATTGGTAGAAGTTATTGGCAGTCCTCAAGGCATTTTATTGAAGATCCCACGTTGAGAAAAAACAAGGACCTCAAATCTTATTTAGTAGATGGGTTACTCAACTGTATGTTATCTAATATGATATATGTGTCCATGAAGTTCAAACGGGCATTTGGTCCAAAATAAAAAGTTGGGATCTGACCAAGAATGGCGAACTTAAGGAGAAACTATCTTGAGGGACATGTTGAGGATCTCATGCAGAAAAATCTGAGGGACTTCACAACTTTAATAAGATAAATTACTTCTCTCATCTCACTGCATGTTATCTTATACGTTTGTGTGGCAGTTCATAGGGCTGGTGCAGTTTCTTTGAGGCATTTGATACAAACTTTGTCAGTTTGCAAGGTGGTCGGGAGTCAATTGAGAAGTTGCTATGCCATCCTCCTTTTCAATAGAAAGAACCATTGTTTGTGACAAGCTGCAGATGTGCTATTCAGTGGCGTCTATGGTCCAGACAAATAATAGAAACTTTAGGGAGAGGAGAGTTCTCACAGGGGTGTTCGAGACCTTGGTGTCCATATCTTTTTGTAATTACCCATTGAGTTACACTTTTCTTGATTGGAGCCCCTTCATTTTTGTACACTTCTTCTTTCTTGATGCTTGTGCGATCTTTCACTTTCTTTTCTCAATAAAAGGATATTGCCAGATCTTATGAATGTTTGTTGGGTAATTTAATAGTTTATCTTGGTACTTGCCCTTTTCAGTTTTAGGTGTGTGTCGATATAATGGTTGCCATGGACTTAATTTGATGCATGATGTCTGTTTGTTCATTTTGGTTTCCTGTTCTGTGGCTGGGGTTCTACTTAATGATTTTGGAAAATAAACATGATATCGTTAGGTTGTTCATAGATTTGTCATGAATATTAGTAAGGGCGCATCTTTTGTGCTTTCATTTTGTAGTATGAAACTGTCGATGTTCGTACCTGCAAACTAAGTTTATTTAGTAACTAGTAAGAAAATTCTATGAAGTGCTGGAGTAGGCTGCTGGTGTTCTTTTACATTTAATGCTTCTTAACTCTTTGGTTGCAGGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTGCCACTACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGAAGGGCCTGAGCAGCAATAG AGTCTAGGGTTAGAATTTCTCATCTTAGTAAAAAAGTTTAGTATAATAAACTAATTTATTATTATTTTTTTTCAAACAAAATGAGAAAAATGGTAAACGTGGGAGTAAATGAAATGGGGAGAAAAAAGAAATGCGGGTGAGAGAGTTCGATAATTTCATAAATCGAAAGGATAATTTAGCGGAGGAAACAGTGACGCCGTGGTGCGGAGAGAAAATAAGAGGCGGTCCGGTGTCCATCTACTCTTGTGGCGGCTATTTCATTTTGGTGGAATCGGCCACCAGCAGATTCAGTAAGACTCGAGCCGTCACCTCAAGGTCGAGGAAGTTCATGGCGTCGATATCCCTTTTCAGCTCTAAAACCCTAGTCTCACCATCGGCGACCTACCTACGGATATCTTCTTCTTCATCTACAAGTCATAGTTGCTGTCTTGGTGGCTGCAGATGCTCCTTCCCAATCAAGCCGCTTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTTGATTTCCCTATTGTTTTAGAAGGCTTATTCGTGACTTATCCTACCACGTTTTTCCTGGAAATTGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTGCCACTACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGAAGGGCCTGAGCAGCAATAG ATGCGGGTGAGAGAGTTCGATAATTTCATAAATCGAAAGGATAATTTAGCGGAGGAAACAGTGACGCCGTGGTGCGGAGAGAAAATAAGAGGCGGTCCGGTGTCCATCTACTCTTGTGGCGGCTATTTCATTTTGGTGGAATCGGCCACCAGCAGATTCAGTAAGACTCGAGCCGTCACCTCAAGGTCGAGGAAGTTCATGGCGTCGATATCCCTTTTCAGCTCTAAAACCCTAGTCTCACCATCGGCGACCTACCTACGGATATCTTCTTCTTCATCTACAAGTCATAGTTGCTGTCTTGGTGGCTGCAGATGCTCCTTCCCAATCAAGCCGCTTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTTGATTTCCCTATTGTTTTAGAAGGCTTATTCGTGACTTATCCTACCACGTTTTTCCTGGAAATTGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTGCCACTACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGAAGGGCCTGAGCAGCAATAG MRVREFDNFINRKDNLAEETVTPWCGEKIRGGPVSIYSCGGYFILVESATSRFSKTRAVTSRSRKFMASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGRQVVRMAPEEEKLTRRNPLDFPIVLEGLFVTYPTTFFLEIEWERPRPGRRPDIFPQFSPMKTPLPLPLPCDPPEEDEEEEEKKEEEEENPDKENPEGPEQQ Homology
BLAST of MELO3C025336 vs. NCBI nr
Match: XP_008463385.1 (PREDICTED: uncharacterized protein LOC103501552 isoform X2 [Cucumis melo] >KAA0046592.1 histone chaperone ASF1-like [Cucumis melo var. makuwa]) HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106 Identity = 209/226 (92.48%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of MELO3C025336 vs. NCBI nr
Match: TYK00104.1 (coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 387.5 bits (994), Expect = 7.9e-104 Identity = 206/226 (91.15%), Postives = 206/226 (91.15%), Query Frame = 0
BLAST of MELO3C025336 vs. NCBI nr
Match: XP_016903019.1 (PREDICTED: uncharacterized protein LOC103501552 isoform X1 [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 9.7e-86 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C025336 vs. NCBI nr
Match: XP_038879472.1 (uncharacterized protein LOC120071334 [Benincasa hispida]) HSP 1 Score: 231.1 bits (588), Expect = 9.5e-57 Identity = 129/160 (80.62%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of MELO3C025336 vs. NCBI nr
Match: KAG6589907.1 (hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221.5 bits (563), Expect = 7.5e-54 Identity = 124/160 (77.50%), Postives = 130/160 (81.25%), Query Frame = 0
BLAST of MELO3C025336 vs. ExPASy TrEMBL
Match: A0A5A7TT41 (Histone chaperone ASF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001310 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106 Identity = 209/226 (92.48%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of MELO3C025336 vs. ExPASy TrEMBL
Match: A0A1S3CKP8 (uncharacterized protein LOC103501552 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501552 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106 Identity = 209/226 (92.48%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of MELO3C025336 vs. ExPASy TrEMBL
Match: A0A5D3BLF1 (Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00600 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.8e-104 Identity = 206/226 (91.15%), Postives = 206/226 (91.15%), Query Frame = 0
BLAST of MELO3C025336 vs. ExPASy TrEMBL
Match: A0A1S4E470 (uncharacterized protein LOC103501552 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501552 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.7e-86 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C025336 vs. ExPASy TrEMBL
Match: A0A6J1HA36 (uncharacterized protein LOC111461515 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461515 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 3.6e-54 Identity = 124/160 (77.50%), Postives = 130/160 (81.25%), Query Frame = 0
BLAST of MELO3C025336 vs. TAIR 10
Match: AT2G17240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 8.0e-30 Identity = 90/157 (57.32%), Postives = 98/157 (62.42%), Query Frame = 0
BLAST of MELO3C025336 vs. TAIR 10
Match: AT3G24506.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 6.6e-24 Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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