MELO3C025040 (gene) Melon (DHL92) v4

Overview
NameMELO3C025040
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 18578398 .. 18578745 (+)
RNA-Seq ExpressionMELO3C025040
SyntenyMELO3C025040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATCCTTGAGGCCAAGGGAAAGGCCAAACAAGTATCCTTTAATGAGCTTGTAGAGGTGTTAGAGCAAGAAATTAAGGCGATAAGCTCAATTGAGAATGATGCAACACCGCTACCAAAGAATTTGAGAAAGAGTACCACGTCCAAGGCTAAAAAAGTAACGATTGGGACTTTGAGATCAGACGAAGTTCAAACAAATCAGGACAATGCAATTGCGAAAGGTGAAGAGGTAGCCACAATACCTAAGATTAAAATTGACAAGATCATCAAGGTCGAGAAGGGTCTCTTTCCCTTCAGTGGGACCCTTCCCAAACTTTTAGGCATTTCAATTACTGCTTCCGGTTAG

mRNA sequence

ATGCCAATCCTTGAGGCCAAGGGAAAGGCCAAACAAGTATCCTTTAATGAGCTTGTAGAGGTGTTAGAGCAAGAAATTAAGGCGATAAGCTCAATTGAGAATGATGCAACACCGCTACCAAAGAATTTGAGAAAGAGTACCACGTCCAAGGCTAAAAAAGTAACGATTGGGACTTTGAGATCAGACGAAGTTCAAACAAATCAGGACAATGCAATTGCGAAAGGTGAAGAGGTAGCCACAATACCTAAGATTAAAATTGACAAGATCATCAAGGTCGAGAAGGGTCTCTTTCCCTTCAGTGGGACCCTTCCCAAACTTTTAGGCATTTCAATTACTGCTTCCGGTTAG

Coding sequence (CDS)

ATGCCAATCCTTGAGGCCAAGGGAAAGGCCAAACAAGTATCCTTTAATGAGCTTGTAGAGGTGTTAGAGCAAGAAATTAAGGCGATAAGCTCAATTGAGAATGATGCAACACCGCTACCAAAGAATTTGAGAAAGAGTACCACGTCCAAGGCTAAAAAAGTAACGATTGGGACTTTGAGATCAGACGAAGTTCAAACAAATCAGGACAATGCAATTGCGAAAGGTGAAGAGGTAGCCACAATACCTAAGATTAAAATTGACAAGATCATCAAGGTCGAGAAGGGTCTCTTTCCCTTCAGTGGGACCCTTCCCAAACTTTTAGGCATTTCAATTACTGCTTCCGGTTAG

Protein sequence

MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLRSDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEKGLFPFSGTLPKLLGISITASG
Homology
[Close]
BLAST of MELO3C025040 vs. NCBI nr
Match: KAA0047756.1 (hypothetical protein E6C27_scaffold1059G00170 [Cucumis melo var. makuwa] >TYK02390.1 hypothetical protein E5676_scaffold155G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR 60
           MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR
Sbjct: 122 MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR 181

Query: 61  SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK 95
           SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK
Sbjct: 182 SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK 215

[Close]
BLAST of MELO3C025040 vs. ExPASy TrEMBL
Match: A0A5A7U0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00950 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.8e-40
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR 60
           MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR
Sbjct: 122 MPILEAKGKAKQVSFNELVEVLEQEIKAISSIENDATPLPKNLRKSTTSKAKKVTIGTLR 181

Query: 61  SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK 95
           SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK
Sbjct: 182 SDEVQTNQDNAIAKGEEVATIPKIKIDKIIKVEK 215

The following BLAST results are available for this feature:
BLAST of MELO3C025040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047756.11.2e-39100.00hypothetical protein E6C27_scaffold1059G00170 [Cucumis melo var. makuwa] >TYK023... [more]
BLAST of MELO3C025040 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C025040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U0J65.8e-40100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C025040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025040.1MELO3C025040.1mRNA