MELO3C025006 (gene) Melon (DHL92) v4

Overview
NameMELO3C025006
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 17821543 .. 17821746 (+)
RNA-Seq ExpressionMELO3C025006
SyntenyMELO3C025006
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

mRNA sequence

ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

Coding sequence (CDS)

ATGACATTTGATGAGCATTGCGAGGAGTTTGAGAAGAAAATTGAGAATTTTAGTCCTTTGAAGGAAGAGGTGTCAAGACCTAAGAAAAAGAGAAATGTTATGATGAAGAAGGCCTTGAGAGCACAGCTTAAGAAAAGGCGAGTTGGAAAAGCAAAAAAAAAACCTCAAGAAGATGAAGGGGAAGACGGCGAGGAAAGTGAATAA

Protein sequence

MTFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMKKALRAQLKKRRVGKAKKKPQEDEGEDGEESE
Homology
[Close]
BLAST of MELO3C025006 vs. NCBI nr
Match: KAA0052865.1 (hypothetical protein E6C27_scaffold33G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0 

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMK-KALRAQLKKRRVGKAKKKPQEDEG 61
           TFDEHCEEFEK+I++ SPLKEE SR KKKR V+M+  ALR Q +KRRV KAK+K +++EG
Sbjct: 62  TFDEHCEEFEKEIKDLSPLKEETSRLKKKRKVIMRNNALRVQFEKRRVDKAKRKLKKNEG 121

[Close]
BLAST of MELO3C025006 vs. NCBI nr
Match: KAA0065695.1 (hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK14446.1 hypothetical protein E5676_scaffold186G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-04
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNV-MMKKALRAQLKKRRVGKAKKKPQEDEG 61
           T DE+ EEF+K+IE+   L+EE SR KK+  V M KK LRAQ +K+R  K K+KP+E+EG
Sbjct: 69  TLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRAQFEKKRAEKEKRKPRENEG 128

Query: 62  EDGEESE 68
           E+G ESE
Sbjct: 129 EEGAESE 135

[Close]
BLAST of MELO3C025006 vs. ExPASy TrEMBL
Match: A0A5A7UGJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00220 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.9e-09
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0 

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNVMMK-KALRAQLKKRRVGKAKKKPQEDEG 61
           TFDEHCEEFEK+I++ SPLKEE SR KKKR V+M+  ALR Q +KRRV KAK+K +++EG
Sbjct: 62  TFDEHCEEFEKEIKDLSPLKEETSRLKKKRKVIMRNNALRVQFEKRRVDKAKRKLKKNEG 121

[Close]
BLAST of MELO3C025006 vs. ExPASy TrEMBL
Match: A0A5A7VIU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001080 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 2   TFDEHCEEFEKKIENFSPLKEEVSRPKKKRNV-MMKKALRAQLKKRRVGKAKKKPQEDEG 61
           T DE+ EEF+K+IE+   L+EE SR KK+  V M KK LRAQ +K+R  K K+KP+E+EG
Sbjct: 69  TLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRAQFEKKRAEKEKRKPRENEG 128

Query: 62  EDGEESE 68
           E+G ESE
Sbjct: 129 EEGAESE 135

The following BLAST results are available for this feature:
BLAST of MELO3C025006 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052865.11.8e-0867.21hypothetical protein E6C27_scaffold33G00220 [Cucumis melo var. makuwa][more]
KAA0065695.11.2e-0456.72hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK1444... [more]
BLAST of MELO3C025006 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C025006 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UGJ68.9e-0967.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VIU56.0e-0556.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C025006 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025006.1MELO3C025006.1mRNA