MELO3C024474 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024474
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	zinc finger (C2H2 type) family protein
Location	chr08: 9252171 .. 9253996 (+)
RNA-Seq Expression	MELO3C024474
Synteny	MELO3C024474

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTTCTCTGGTGGTACAACCACCAATAAACAAACCCTAATTTTACTCCGATTTTGCAATACTTGAGCTCTAGATTGAAGAACATGGGAGGAAAGTGTCCTCACAGAAGCGTAAAAAAGCGGAGATACTCACACAAGACCGCTCGGCGAACGAAATTTCTTGTCAAAGATATCCTTTTCTTACACTTCATTGTTCTATTTCGTTTTTCGTTTTCGTTATGTTTGTGGATTTTCCTTAATTTGATGAATCGATGAATCACGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGAGTAAGTTTTTTCATTTGCTACTCTTTTTTTTTTTTTTTATTATTATTATTATTTCTTTACTCGAAATTTCTGTAGAAAATCGTTTCTCTCATTGTAGAGAATTCATCAATTTTAATGCTTAGGGCTGAATATTTTATGAAGTATTATGATTTGGTTATCTTGATTGAAATTTGCAAGTACAGATTTGAAGTTTAGAGTTTATAATCGATCAATTAATGCTGTGGTTTACTCATCTTTAGGGCTGAATATTTTTTTGATGTGTTATCTGAGGCTGAGATGTTTTATGAAGTATTATGTACGATTTTAAAGTTTACAATTTACAATCGATTAATGGTATGGTTTCAGCCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGTGAGCTTAGCCAATTTTTACCTCCCATCATTTTCTGGTCATCCTTTGCGCATTGAAGTTCATATATTTAAAAGAAATCCATCTCGTATTCTCCTTGGAGGCATGATTAAATGTTGAGAACGCTCACTTTTACTAACCCTATCAGCCTTTGTTTCTTATATTACGTTTTTAGTTTGCCTAATTTGGTTGGTGTTTTGATTAGGTTGTTGTGTGAAATTATGAACTTGGAATTGGAATATTAAACTTGGTACTGGAGTCTGTCGTAATGCTGACTGAGTTTAAATTTCTTAAGTTCCTTCACCTGGTCTCAGTCTTAATTTGTTATAAATACGGCATAGGTGAAAACAAATTTGGAACTCCAGTGGAATTTGAATTGATAATCTTCTTTTTCTTCTTTAATTATATCCATTTACAGCCATTCACCTTAGTTTCTCTATAGTATTTGATTTCATAAGTTAGTATGACTGTATTTGAAGAAGAATATAGGAAATGCAACTGTTCACTATAATATTTGATTCGTTTGATTGTTAGGTATGAAGCTAGTAAGATCGTACTAAAGAAGAATATTTGAATTGCAATTGTTAACTATGTTCCTGTACCACAACGATGTTGCAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAGCTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATTACGTATCATACAACTTAAACATTTTTGGTACTGTAAAGAGCTTATAGTGAGGTTTGTTTCTCGTTTAACTAACAAGATCGATTTTGTAAAATACTATTTACTGGCAATGTATTTTATTTGAAGAGTTCTTTTAATCAATTGAATGAAAAGTAGGTTAATTTGAGCTTAGCTGGTTTAGATGATCATTCTCCACCATGCTCTTTAAGCCATGAAGGGAAAAAAGGAAAGGTTGTACTTATATCTAGGTGCTCATTTTGAATAATATATATCCTAGCGTCTTATGAGTTTTAATCATGGGTAATATAAATTAATGAATGATTCTTA

mRNA sequence

AAGGTTCTCTGGTGGTACAACCACCAATAAACAAACCCTAATTTTACTCCGATTTTGCAATACTTGAGCTCTAGATTGAAGAACATGGGAGGAAAGTGTCCTCACAGAAGCGTAAAAAAGCGGAGATACTCACACAAGACCGCTCGGCGAACGAAATTTCTTGTCAAAGATATCCTTTTCTTACACTTCATTGTTCTATTTCGTTTTTCGTTTTCGTTATGTTTGTGGATTTTCCTTAATTTGATGAATCGATGAATCACGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAGCTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATTACGTATCATACAACTTAAACATTTTTGGTACTGTAAAGAGCTTATAGTGAGGTTTGTTTCTCGTTTAACTAACAAGATCGATTTTGTAAAATACTATTTACTGGCAATGTATTTTATTTGAAGAGTTCTTTTAATCAATTGAATGAAAAGTAGGTTAATTTGAGCTTAGCTGGTTTAGATGATCATTCTCCACCATGCTCTTTAAGCCATGAAGGGAAAAAAGGAAAGGTTGTACTTATATCTAGGTGCTCATTTTGAATAATATATATCCTAGCGTCTTATGAGTTTTAATCATGGGTAATATAAATTAATGAATGATTCTTA

Coding sequence (CDS)

ATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAGCTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA

Protein sequence

MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM

Homology

[Close]

BLAST of MELO3C024474 vs. NCBI nr
Match: KAA0063802.1 (zinc finger protein 593 [Cucumis melo var. makuwa] >TYK07322.1 zinc finger protein 593 [Cucumis melo var. makuwa])

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
          MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS
Sbjct: 1  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60

Query: 61 GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
          GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61 GPAPHTQLDAELAAGMGMPDNGPKLMAM 88

[Close]

BLAST of MELO3C024474 vs. NCBI nr
Match: XP_008462489.1 (PREDICTED: zinc finger protein 593 [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS
Sbjct: 32  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. NCBI nr
Match: XP_004143276.1 (zinc finger protein 593 [Cucumis sativus] >KGN48194.1 hypothetical protein Csa_004178 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 5.2e-43
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M 
Sbjct: 32  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQML 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. NCBI nr
Match: XP_038882974.1 (zinc finger protein 593 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 7.5e-42
Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVY+ELAKPEVE+ SLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLM+
Sbjct: 32  MVYDELAKPEVEKTSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRLKLMA 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. NCBI nr
Match: XP_022143723.1 (zinc finger protein 593 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 7.5e-42
Identity = 82/88 (93.18%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLM+
Sbjct: 32  MVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRMKLMT 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLM+M
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMSM 119

[Close]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot
Match: B0BLT0 (Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.4e-12
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 18  VDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMG 77
           +D  LPG  Q+YCLHC RYF ++    EHFKTK H++R+K +    P+TQ +AE AAGMG
Sbjct: 51  IDYQLPGNAQHYCLHCSRYFVDLKTLKEHFKTKVHKRRLKQLR-EEPYTQEEAERAAGMG 109

[Close]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot
Match: Q9P370 (Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud20 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-10
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 2   VYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSG 61
           ++N+L + E +   LP+D DLPG+GQ+YC+ C RYF +      H K K H++R+K +  
Sbjct: 31  IHNDLTESE-KFDKLPIDPDLPGLGQHYCIECARYFDSSQALLVHKKGKVHKRRLKNLR- 90

Query: 62  PAPHTQLDAELAAGMGMP 80
             P+TQ +AE A  +G P
Sbjct: 91  EEPYTQEEAEAAVNIGQP 106

[Close]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot
Match: Q08004 (Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD20 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-10
Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 1  MVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKL 60
          ++YN+L+  E  +  L  P+DE  PG+GQ+YC+HC +Y         H K K H++RVK 
Sbjct: 20 LIYNDLSTKESVQKLLNQPLDETKPGLGQHYCIHCAKYMETAIALKTHLKGKVHKRRVKE 79

Query: 61 MSGPAPHTQLDAELAAGMGM 79
          + G  P+TQ  ++ AAG  +
Sbjct: 80 LRG-VPYTQEVSDAAAGYNL 98

[Close]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot
Match: Q9U239 (Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-10
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 4   NELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSG 63
           +E  KPE     L   +D DLPG GQ+YC+ C+R+F +   R  H KTK H+ RVK +  
Sbjct: 27  HEDLKPEKAAKLLQQEIDYDLPGNGQFYCIECERHFVDEKTRQLHRKTKLHKNRVKTLK- 86

Query: 64  PAPHTQLDAELAAGMG 78
             P+TQ +A  A G G
Sbjct: 87  EVPYTQAEANAAGGSG 101

[Close]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot
Match: O00488 (Zinc finger protein 593 OS=Homo sapiens OX=9606 GN=ZNF593 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 8.6e-09
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 7   AKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHT 66
           A+P+ + P+   D DLPG G + CL C RYF + +    HF++K H+KR+K +S   P++
Sbjct: 41  ARPQPD-PNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLS-VEPYS 100

Query: 67  QLDAELAAGMG 78
           Q +AE AAGMG
Sbjct: 101 QEEAERAAGMG 109

[Close]

BLAST of MELO3C024474 vs. ExPASy TrEMBL
Match: A0A5A7V6B3 (Zinc finger protein 593 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00370 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
          MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS
Sbjct: 1  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60

Query: 61 GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
          GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61 GPAPHTQLDAELAAGMGMPDNGPKLMAM 88

[Close]

BLAST of MELO3C024474 vs. ExPASy TrEMBL
Match: A0A1S3CH13 (zinc finger protein 593 OS=Cucumis melo OX=3656 GN=LOC103500829 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS
Sbjct: 32  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. ExPASy TrEMBL
Match: A0A0A0KHA1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446540 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M 
Sbjct: 32  MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQML 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. ExPASy TrEMBL
Match: A0A6J1CRE9 (zinc finger protein 593 OS=Momordica charantia OX=3673 GN=LOC111013565 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-42
Identity = 82/88 (93.18%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLM+
Sbjct: 32  MVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRMKLMT 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDAELAAGMGMPDNGPKLM+M
Sbjct: 92  GPAPHTQLDAELAAGMGMPDNGPKLMSM 119

[Close]

BLAST of MELO3C024474 vs. ExPASy TrEMBL
Match: A0A6J1I5Q7 (zinc finger protein 593 OS=Cucurbita maxima OX=3661 GN=LOC111471272 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.2e-42
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           MVY+ L KPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM 
Sbjct: 32  MVYDALKKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMM 91

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMAM 89
           GPAPHTQLDA+LAAGMGMPDNGPKLMAM
Sbjct: 92  GPAPHTQLDADLAAGMGMPDNGPKLMAM 119

[Close]

BLAST of MELO3C024474 vs. TAIR 10
Match: AT2G36930.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 148.3 bits (373), Expect = 2.9e-36
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMS 60
           +VY EL KPE E   L +DEDLPGMGQ+YCLHCDRYF+NVSVRD+HFKTK+H+KRV +M 
Sbjct: 31  LVYTELRKPETEIKPLQLDEDLPGMGQFYCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMM 90

Query: 61  GPAPHTQLDAELAAGMGMPDNGPKLMA 88
           G APH+QLDA+LA GMGMPDNGPKLM+
Sbjct: 91  GQAPHSQLDADLAGGMGMPDNGPKLMS 117

The following BLAST results are available for this feature:

BLAST of MELO3C024474 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063802.1	2.1e-44	100.00	zinc finger protein 593 [Cucumis melo var. makuwa] >TYK07322.1 zinc finger prote...	[more]
XP_008462489.1	2.1e-44	100.00	PREDICTED: zinc finger protein 593 [Cucumis melo]	[more]
XP_004143276.1	5.2e-43	97.73	zinc finger protein 593 [Cucumis sativus] >KGN48194.1 hypothetical protein Csa_0...	[more]
XP_038882974.1	7.5e-42	94.32	zinc finger protein 593 [Benincasa hispida]	[more]
XP_022143723.1	7.5e-42	93.18	zinc finger protein 593 [Momordica charantia]	[more]

BLAST of MELO3C024474 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0BLT0	8.4e-12	53.33	Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1	[more]
Q9P370	3.5e-10	41.03	Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]
Q08004	7.8e-10	38.75	Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
Q9U239	7.8e-10	43.42	Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 P...	[more]
O00488	8.6e-09	45.07	Zinc finger protein 593 OS=Homo sapiens OX=9606 GN=ZNF593 PE=1 SV=2	[more]

BLAST of MELO3C024474 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6B3	1.0e-44	100.00	Zinc finger protein 593 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CH13	1.0e-44	100.00	zinc finger protein 593 OS=Cucumis melo OX=3656 GN=LOC103500829 PE=4 SV=1	[more]
A0A0A0KHA1	2.5e-43	97.73	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446540 P...	[more]
A0A6J1CRE9	3.6e-42	93.18	zinc finger protein 593 OS=Momordica charantia OX=3673 GN=LOC111013565 PE=4 SV=1	[more]
A0A6J1I5Q7	6.2e-42	94.32	zinc finger protein 593 OS=Cucurbita maxima OX=3661 GN=LOC111471272 PE=4 SV=1	[more]

BLAST of MELO3C024474 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36930.1	2.9e-36	74.71	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 25..59 e-value: 5.4E-10 score: 49.2
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 14..78 e-value: 8.5E-24 score: 85.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..88
None	No IPR available	PANTHER	PTHR47444:SF2	BNAA03G16890D PROTEIN	coord: 1..87
None	No IPR available	PANTHER	PTHR47444	EXPRESSED PROTEIN	coord: 1..87
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 27..53 e-value: 1.5E-9 score: 37.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 30..52
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 16..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024474.1	MELO3C024474.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding