MELO3C024463.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C024463.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionthylakoid lumenal 15.0 kDa protein 2, chloroplastic
Locationchr08: 9034425 .. 9036633 (-)
RNA-Seq ExpressionMELO3C024463.jh1
SyntenyMELO3C024463.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTAGTTAGTTAACATGTCAATACCCCATAGTCAAATTTTCAACGGTTAGTGTAGATGTCTCGTTTTAATATATATATATATATAACCCGCGGTACAAAAAAGACGTTGCAAATTATTGCCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCAAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAACCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGTAGTCATTCTTGCCTATTATCATCACGTTGATGAGAAAACAATGCTCAATTCGGTTTATGCTGATTCGAGTTTGAATTTTTAGGTTGTTATAAATTTGGATGTTGATACTCGTACTCTACCTTACTATAAAATTTTCATAATTTAATGAAATGCTAACAGTAATTCAGTGAGTAGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGTATGGTTGGTTTGGCTTCATTATCTGATATAATTTTGGGTGTTTGATTCATGATCAAGTGGCCACTGCTGATTCTGATTTTCTGTGAAACAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGTTTGTTCCATGTTTTATTGTCTTTGTCTGTCAGCAATTTCTTGTATAAAGGAGGATTAGATCACATTTCTCTCGTCTTTAATTCAGAGTTAAATGCACTCATAATATTCTTTTTATCTATGCATTAGAATTCTCTTTTGCGTGGTCTTACTAGAACGTTGAACGTCTAAGATTAGTTTATTTGGATAGAAACCACTAATCTAATCATCAGAAACGATCAATTTCATGATTTTTTTTTCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTATGAACAGTGTTAGTATACTTTTCTCCTCCTATGCCTATGATGACATTGATTGATATCTTCATTCAGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGTAACATCTCCAATTGATACTTCTGTATAACAGTTACTGTTGTGAGCTTTTGCTTTGGTCACTGGTCAGGAAAATATGGTCACGATCATCATCTCATATGATCGCTCTGGTGACTTAAACAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAAGAGCTTACAGCATCAAAGAATTCTGTTGTGTATTTTTAAACTTGATTTGTATGTTTTGACAGTGATACATGATATATAGTCTTCTCTTGCTACAACCTGCATAACTTAATTGTTTGTTTTTCTGATTCAAGAACTTAGCGTATGTCTATTACTTGAAAAAAATGGCAGTAGTGATATAGGAAGGTAAAAAGGAATTTGATTAACTATGTGGACGTTTGTATCTCAACTGTGCAGCAACCAAGAAAAAAAAAAGTGAGGTACATTTTTTAGTTGCTTAAAAGCTAGTTATGATATGAACACTAGATGCAATCCACTCCCCACTTTTCTGTTTTCTTCTTTCTTCTACAATCTTCTGTAGTTCTTCAGGCCGACAAGGGACTGTCAGAGCTCCCTTTTGTTGGAATCCATATTCTTCCTTTGCCAGCTCCAATAGCCTTAAGAATTCAGGATTAGACAAGAACTCCAAATTAATGACGAACCTTTTTCTCTCATCACCATCCACTGCAAATACCACAAAATGGCCTTCTTCCACGTCTTTTGGCACCGTAGCTGCTGCTTCGAATTCTTCATAG

mRNA sequence

ATATTTAGTTAGTTAACATGTCAATACCCCATAGTCAAATTTTCAACGGTTAGTGTAGATGTCTCGTTTTAATATATATATATATATAACCCGCGGTACAAAAAAGACGTTGCAAATTATTGCCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCAAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAACCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAATTCTTCAGGCCGACAAGGGACTGTCAGAGCTCCCTTTTGTTGGAATCCATATTCTTCCTTTGCCAGCTCCAATAGCCTTAAGAATTCAGGATTAGACAAGAACTCCAAATTAATGACGAACCTTTTTCTCTCATCACCATCCACTGCAAATACCACAAAATGGCCTTCTTCCACGTCTTTTGGCACCGTAGCTGCTGCTTCGAATTCTTCATAG

Coding sequence (CDS)

ATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCAAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAACCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAATTCTTCAGGCCGACAAGGGACTGTCAGAGCTCCCTTTTGTTGGAATCCATATTCTTCCTTTGCCAGCTCCAATAGCCTTAAGAATTCAGGATTAGACAAGAACTCCAAATTAATGACGAACCTTTTTCTCTCATCACCATCCACTGCAAATACCACAAAATGGCCTTCTTCCACGTCTTTTGGCACCGTAGCTGCTGCTTCGAATTCTTCATAG

Protein sequence

MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEINSSGRQGTVRAPFCWNPYSSFASSNSLKNSGLDKNSKLMTNLFLSSPSTANTTKWPSSTSFGTVAAASNSS
Homology
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BLAST of MELO3C024463.jh1 vs. NCBI nr
Match: XP_008462470.1 (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 456 bits (1172), Expect = 2.02e-160
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227

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BLAST of MELO3C024463.jh1 vs. NCBI nr
Match: XP_004143269.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184.1 hypothetical protein Csa_003336 [Cucumis sativus])

HSP 1 Score: 434 bits (1116), Expect = 6.85e-152
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PS+KYTDF  RLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEI
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEI 227

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BLAST of MELO3C024463.jh1 vs. NCBI nr
Match: XP_038881208.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 404 bits (1038), Expect = 5.18e-140
Identity = 202/227 (88.99%), Postives = 211/227 (92.95%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSF R S P+ RSS RFSPPS  FPS+K TDF + LLH P+K LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFFRPSPPVFRSSFRFSPPSFSFPSQKCTDFSNWLLHFPKKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
             SGALALGI LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIA+IE
Sbjct: 61  AFSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIANIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFW+VDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPLTPGLAIKDFWKVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           FWSRLAGKYGNIFYWKEKGED+SIESAVMAIS+CLREPVGPNNCSEI
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCSEI 227

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BLAST of MELO3C024463.jh1 vs. NCBI nr
Match: KAA0063815.1 (thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 394 bits (1011), Expect = 7.70e-136
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEK 198
           FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198

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BLAST of MELO3C024463.jh1 vs. NCBI nr
Match: KAG6604403.1 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389 bits (1000), Expect = 3.64e-134
Identity = 197/231 (85.28%), Postives = 209/231 (90.48%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSKKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSFS +S P+ RSS    SRFSPPS  FPS K TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  PLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
            LSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEI
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEI 231

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BLAST of MELO3C024463.jh1 vs. ExPASy Swiss-Prot
Match: Q9LVV5 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g52970 PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 6.6e-85
Identity = 158/200 (79.00%), Postives = 172/200 (86.00%), Query Frame = 0 

Query: 28  SSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSFVLSGALALGITLSGVGFADAKVGVNKP 87
           SSR    SS    K   D  + +     K LS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23  SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82

Query: 88  ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
           ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83  ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142

Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
           VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202

Query: 208 VMAISSCLREPVGPNNCSEI 228
           VMAISSCLREPVG NNC+EI
Sbjct: 203 VMAISSCLREPVGRNNCAEI 222

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BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CH24 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500819 PE=4 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 9.77e-161
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227

[Close]
BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KH91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 3.32e-152
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PS+KYTDF  RLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEI
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEI 227

[Close]
BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CAH5 (Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00230 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 3.73e-136
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEK 198
           FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198

[Close]
BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EJL7 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433197 PE=4 SV=1)

HSP 1 Score: 389 bits (999), Expect = 2.50e-134
Identity = 196/231 (84.85%), Postives = 209/231 (90.48%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSKKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSF  +S P+ RSS    SRFSPPS  FPS K+TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFALSRFSPPSVSFPSHKFTDFTNCLLHLPPK 60

Query: 61  PLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
            LSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEI
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEI 231

[Close]
BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IMV5 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478838 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 1.02e-133
Identity = 196/231 (84.85%), Postives = 208/231 (90.04%), Query Frame = 0 

Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSKKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSF  +S P+ RSS    SRFSPPS  FPS K TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  PLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
            LSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEKDTGYKLRVLAQN+P TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNFPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEI 227
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEI
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEI 231

[Close]
BLAST of MELO3C024463.jh1 vs. TAIR 10
Match: AT5G52970.1 (thylakoid lumen 15.0 kDa protein )

HSP 1 Score: 315.5 bits (807), Expect = 4.7e-86
Identity = 158/200 (79.00%), Postives = 172/200 (86.00%), Query Frame = 0 

Query: 28  SSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSFVLSGALALGITLSGVGFADAKVGVNKP 87
           SSR    SS    K   D  + +     K LS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23  SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82

Query: 88  ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
           ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83  ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142

Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
           VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202

Query: 208 VMAISSCLREPVGPNNCSEI 228
           VMAISSCLREPVG NNC+EI
Sbjct: 203 VMAISSCLREPVGRNNCAEI 222

The following BLAST results are available for this feature:
BLAST of MELO3C024463.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462470.12.02e-160100.00PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo][more]
XP_004143269.16.85e-15295.59thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184.... [more]
XP_038881208.15.18e-14088.99thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida][more]
KAA0063815.17.70e-13698.99thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thyl... [more]
KAG6604403.13.64e-13485.28Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosp... [more]
BLAST of MELO3C024463.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LVV56.6e-8579.00Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
BLAST of MELO3C024463.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CH249.77e-161100.00thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0KH913.32e-15295.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1[more]
A0A5D3CAH53.73e-13698.99Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1EJL72.50e-13484.85thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata O... [more]
A0A6J1IMV51.02e-13384.85thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=... [more]
BLAST of MELO3C024463.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52970.14.7e-8679.00thylakoid lumen 15.0 kDa protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..298
NoneNo IPR availablePANTHERPTHR35514FAMILY NOT NAMEDcoord: 14..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024463.jh1.t1MELO3C024463.jh1.t1mRNA