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MELO3C024160 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCCTTTTGTGGCTTGCCACAACGACTTTGGTTGGGGGTCAAGTTCTAAGGTCGTCGGGGCCTCCACCAGAACGTACGAGATATCATGTTCATGTGCTAAACGGGCCATATTATGTTCATGTGCTAAATGGGCTAAGCTACCATAGTTTGGATGTGCATTGTCAATCCAAGGACGATGATTTGGGACATCATTTGGTTAATCATGGAGATGATTTCCAATGGAACTTTATAGAAAACCTTTTCAGAACAACCTTGTTTTGGTGTAGATTGGAAAAGTCGGATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCGTTGAAGAACCCTTGGCTTCGTCGTAGGTGTGGGACTCAATTAACTTGTCTTTGGACAGCTAAAGATGATGGAATTTATTTGAGAAATATGCCTACTAATGTTGATGAATTTGTTCACAAATGGATTGCAACGTAA ATGGTCCTTTTGTGGCTTGCCACAACGACTTTGGTTGGGGGTCAAGTTCTAAGGTCGTCGGGGCCTCCACCAGAACGTACGAGATATCATGTTCATGTGCTAAACGGGCCATATTATGTTCATGTGCTAAATGGGCTAAGCTACCATAGTTTGGATGTGCATTGTCAATCCAAGGACGATGATTTGGGACATCATTTGGTTAATCATGGAGATGATTTCCAATGGAACTTTATAGAAAACCTTTTCAGAACAACCTTGTTTTGGTGTAGATTGGAAAAGTCGGATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCGTTGAAGAACCCTTGGCTTCGTCGTAGGTGTGGGACTCAATTAACTTGTCTTTGGACAGCTAAAGATGATGGAATTTATTTGAGAAATATGCCTACTAATGTTGATGAATTTGTTCACAAATGGATTGCAACGTAA ATGGTCCTTTTGTGGCTTGCCACAACGACTTTGGTTGGGGGTCAAGTTCTAAGGTCGTCGGGGCCTCCACCAGAACGTACGAGATATCATGTTCATGTGCTAAACGGGCCATATTATGTTCATGTGCTAAATGGGCTAAGCTACCATAGTTTGGATGTGCATTGTCAATCCAAGGACGATGATTTGGGACATCATTTGGTTAATCATGGAGATGATTTCCAATGGAACTTTATAGAAAACCTTTTCAGAACAACCTTGTTTTGGTGTAGATTGGAAAAGTCGGATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCGTTGAAGAACCCTTGGCTTCGTCGTAGGTGTGGGACTCAATTAACTTGTCTTTGGACAGCTAAAGATGATGGAATTTATTTGAGAAATATGCCTACTAATGTTGATGAATTTGTTCACAAATGGATTGCAACGTAA MVLLWLATTTLVGGQVLRSSGPPPERTRYHVHVLNGPYYVHVLNGLSYHSLDVHCQSKDDDLGHHLVNHGDDFQWNFIENLFRTTLFWCRLEKSDAYVSFESFWPESLKNPWLRRRCGTQLTCLWTAKDDGIYLRNMPTNVDEFVHKWIAT Homology
BLAST of MELO3C024160 vs. NCBI nr
Match: KAA0050588.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07852.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 336.3 bits (861), Expect = 1.4e-88 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of MELO3C024160 vs. NCBI nr
Match: XP_008462122.1 (PREDICTED: uncharacterized protein LOC103500551 [Cucumis melo]) HSP 1 Score: 336.3 bits (861), Expect = 1.4e-88 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of MELO3C024160 vs. NCBI nr
Match: XP_011659759.1 (S-protein homolog 74-like [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 5.5e-77 Identity = 133/150 (88.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of MELO3C024160 vs. NCBI nr
Match: KAE8646230.1 (hypothetical protein Csa_023815 [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 1.7e-73 Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of MELO3C024160 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 231.5 bits (589), Expect = 4.8e-57 Identity = 107/152 (70.39%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 37/148 (25.00%), Postives = 69/148 (46.62%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08 Identity = 31/84 (36.90%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.4e-08 Identity = 36/117 (30.77%), Postives = 55/117 (47.01%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy TrEMBL
Match: A0A5A7U5N9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001530 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 6.8e-89 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy TrEMBL
Match: A0A1S3CG65 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500551 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 6.8e-89 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy TrEMBL
Match: A0A5A7U8H6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00220 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.1e-57 Identity = 109/151 (72.19%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy TrEMBL
Match: A0A1S3CGQ1 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500539 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.1e-57 Identity = 109/151 (72.19%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of MELO3C024160 vs. ExPASy TrEMBL
Match: A0A5A7U930 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00230 PE=3 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.2e-57 Identity = 110/151 (72.85%), Postives = 123/151 (81.46%), Query Frame = 0
BLAST of MELO3C024160 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of MELO3C024160 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of MELO3C024160 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 34/100 (34.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of MELO3C024160 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-12 Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of MELO3C024160 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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