Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTCGGAGTCGTCGTGGGTCAGAGTTTGCATGGGTGTTGTCAGACTACAGCGGGTCATCGTCGGATTGCAGTGGATCGTCGTCTGAAGGTCGAAGGTAGTGTCAAAGGTCGTGGGTCACCGTCGGAAGGTCGTGGGTCACCGTCAGAAGGTCGTCGATCACCGTCAGAAGGCCGTCGATCACTATCAGTAGGACAAGGCCTGGAGATGTCATCGGTCGTGTTATCCGAAAATGGAGACTAC A mRNA sequence
ATGTGGGTCGGAGTCGTCGTGGGTCAGAGTTTGCATGGGTGTTGTCAGACTACAGCGGGTCATCGTCGGATTGCAGTGGATCGTCGTCTGAAGGTCGAAGGTAGTGTCAAAGGTCGTGGGTCACCGTCGGAAGGTCGTGGGTCACCGTCAGAAGGTCGTCGATCACCGTCAGAAGGCCGTCGATCACTATCAGTAGGACAAGGCCTGGAGATGTCATCGGTCGTGTTATCCGAAAATGGAGACTACA Coding sequence (CDS)
ATGTGGGTCGGAGTCGTCGTGGGTCAGAGTTTGCATGGGTGTTGTCAGACTACAGCGGGTCATCGTCGGATTGCAGTGGATCGTCGTCTGAAGGTCGAAGGTAGTGTCAAAGGTCGTGGGTCACCGTCGGAAGGTCGTGGGTCACCGTCAGAAGGTCGTCGATCACCGTCAGAAGGCCGTCGATCACTATCAGTAGGACAAGGCCTGGAGATGTCATCGGTCGTGTTATCCGAAAATGGAGACTAC Protein sequence
MWVGVVVGQSLHGCCQTTAGHRRIAVDRRLKVEGSVKGRGSPSEGRGSPSEGRRSPSEGRRSLSVGQGLEMSSVVLSENGDY
Homology
BLAST of MELO3C024109 vs. NCBI nr
Match:
TYK31580.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0
Query: 4 GVVVGQSLHGCCQTTAGHRRIAVDRRLKVEGSVKGRGSPSEGRGSPSEGRRSPSEGRRSL 63 GVVVGQSLHGCCQTTAGHRRIAVD RLKVEGSVK RGSPSE RGS SEGRRSPSEGRRSL Sbjct: 293 GVVVGQSLHGCCQTTAGHRRIAVDHRLKVEGSVKNRGSPSEDRGSRSEGRRSPSEGRRSL 352 Query: 64 SVGQGLEMSSVVLSENGDY 83 SVGQGLEMSSVVLSENGDY Sbjct: 353 SVGQGLEMSSVVLSENGDY 371
BLAST of MELO3C024109 vs. ExPASy TrEMBL
Match:
A0A5D3E7L5 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00750 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0
Query: 4 GVVVGQSLHGCCQTTAGHRRIAVDRRLKVEGSVKGRGSPSEGRGSPSEGRRSPSEGRRSL 63 GVVVGQSLHGCCQTTAGHRRIAVD RLKVEGSVK RGSPSE RGS SEGRRSPSEGRRSL Sbjct: 293 GVVVGQSLHGCCQTTAGHRRIAVDHRLKVEGSVKNRGSPSEDRGSRSEGRRSPSEGRRSL 352 Query: 64 SVGQGLEMSSVVLSENGDY 83 SVGQGLEMSSVVLSENGDY Sbjct: 353 SVGQGLEMSSVVLSENGDY 371
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TYK31580.1 3.2e-31 94.94 NBS-LRR type resistance protein [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5D3E7L5 1.6e-31 94.94 NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G T G G G T C G G A G T C G T C G T G G G T C A G A G T T T G C A T G G G T G T T G T C A G A C T A C A G C G G G T C A T C G T C G G A T T G C A G T G G A T C G T C G T C T G A A G G T C G A A G G T A G T G T C A A A G G T C G T G G G T C A C C G T C G G A A G G T C G T G G G T C A C C G T C A G A A G G T C G T C G A T C A C C G T C A G A A G G C C G T C G A T C A C T A T C A G T A G G A C A A G G C C T G G A G A T G T C A T C G G T C G T G T T A T C C G A A A A T G G A G A C T A C A 20 40 60 80 100 120 140 160 180 200 220 240 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 60..82
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 30..82
Relationships
The following mRNA feature(s) are a part of this gene: