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MELO3C024092 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGAACCCAACACAAAATGGACCTCCCATGCACTCCAACGTGTTAGGGATGAGGCAATGTATTTTGGCGATGCGTGAAGGTCACGTGCGGCTAATTCTGGCGAGCAAGAACTCAGATAGGGGCGGATGGTGGTAGCGCTCCTTCTGAGGTGTGCGATGTCAACAAACGGCCACTCGTACTTGGTGACCAAACTTAAACCCTAACGGAATGTAGTTGTCAAAGAATAAACAAATAGACGAATGTCCCGAACCCTAGATTACTTGGATACCATGTTGTAGTTAGAGTGAAATATTAAATAACTCCCTTACTTAATTCTATACAACATATATGGGCATTCCTGAAAACCGTGAATTACAATGAAGTGCAGAAGAATAATAATGAGCTCCAATACTTACATATACACTAAAATATGATCATCTGGAAACTTGCATTCTCTTGGGTTTTTTTTTTCTACAGGTCTTCTAGTGTCTGCTTCGTATCTTTAAAGATGGTATGTTCCTGAACTTCTGTTTTTCATCTGTTCCTGTTTTCGTTTTGGTCCTTGATTAATTTTGCTCGTGTAACTTCAGAGTGTATTTATTCCTTTAATGTCTCCGATAAATTGAATTATTTCCTTCAAATGCGTGGTTCTCACCTGTTGTTTTTTCTTTTCCCTTCATGGGTGTGCTCTAATCGATATTTTTTATTGCAGCTTCCTCTTTCCCTCCTAAAGACTGCTCAAGGACACCCAATGGTAAGGGTTTTCTTTCAGTTGCCTTTCTGTTAATGGGTGAGCTTACATGCACTTAGAGTAAGTTCAAGAGAGAGTATCACATTTGATTGCTACTTTGAAGTTTCGATTGATTTGATATCCAGATAGGTGGGATAATACTTTTCAAATTGAGCCCCTGGAGCTTCTATTATGGTTATTATTATCATTATTATTTTAGATTTTTTTGCTTGGCTAAATCTTTAGTGCCACCACAGTGATACATAGTGGTTGTATATGGCTTTACTTTGTCTTGAGCTATTCTGGCTATTGTCAAGGACTTCTACTTTAGGATTTCGTTTATGTGCTTGTTCTAAAAATGTATAATTTCTGTGTTGCAACAGTTGGTGGAATTAAAAAACGGTGAGACATACAACGGCCATTTGGTTAATTGTGACACATGGATGAACATTCATCTTCGGGAAGTCATCTGCACTTCTAAAGTAATGCACTTCTATTTTATGGATGATTTTTTTCTCTTTTGGATTTTTCTTCTTTCTCTAGGAGTTTGAACTTAAAATGACCATGTTTTCCAATTATCAAATGTCAGGACGGTGATCGGTTTTGGCGAATGCCCGAATTTTATATCCGTGGTAATACAATCAAGTATTTGCGAGTTCCAGATGAGGTATTCATGAAAACTGTTGCCTTTTATACTGTTTTATTGTGTGATGTTTGATGCATAAGAGTACCTTACATATAATATGTGGTTGTTGAACAAAAAAGTCAGTTGCCTTAATTTAGTTCTTTTTCCACTTCTATCACATGCTTCTCGGCCGCATCTCATTTTTATTTCTTGGTTTCTAATATTATTTCCTCTCTTCTTTGACTTGTACTAAACTTTGTCATCATCTTTAACTTGCATGTGATCTTCTCGGCATCCACCAAAAAGTTATTTAATAAAACTGTTATTTTTCTTTCTGGTGATTTAAGTTATATCACTCCCTTTTTGTAATTTGCCCTAACTATAGTAACTTCCCTAGTTTTTGATCAGCTGTTTCAGTATTGTTAGCTCTTTCATACATGCATGGACCTGAGTGTACACTTACATGCAATCCTGAAATGTTCTATTTCACTTATTGTAACGCCCAACAAATTCGATATTTCTTTTTGTTTTGGCCATTGTCATCAATATTAAGTGTGGTTATGGGAATTTTTAAATTTATTGGAAGAACCTTACCATTTTGATTTTCTCGAGTAATTAAGGTTGGGAATCCTTATTTGTTTAGGATAATAAGTATTACCTTTTATTTTATTATTTTATTTTTATTGGAAATAATTAGGGAAGCCTTATTAAACTAAAGTTGGTTGTTTTTGGTGAGATTTGGGGAGAGAGAGGAGAGGTTGTTTTGGGCTTTTAAAAGGAAAAGAAAAGAGTCATTTTTTCTTATAAAAAGGCCTTGGGACTCGTGCGTAAAGAGGAAGAGAAAAAAAAATCAAAGAAAGAAAGAGGGGAAAAGAAAAAGACAAAGGAAAAATTTTTTTTATTGAAACCCTAGCCGCCGCACGCCGCCGCCGCCGCGAACCCGAGCCGCCAAGCATCCCCCCTCTCTGTTCAGCAGCGCAGCCGAGCCTGCAGTCGAAACCGAGCCGTCGCCGAGCTTCCAGCCGCGTTGGAAGAATCGTCCAAGCCGGTCCGCGCAGCCGAGCGCCGTGTCTGCAGCCGAAACTCGCCGCGCCGCGTCGATCTGAGGAAGAGCAGCCAGCCGCGTCGCGTCGCTCCGATCCAGCGCTGAGGAGCCGCAGCCGATTCGTCAGCCAGCCGTGTCCGCAACGCCGTCGCTCACACGCCCAGCCACGCCGCGCCGCTTAGATCCGACGCAGCGCAGCCGGAACGTTCGTCAGCCAGCCGTCGCGCCGACTGAAATCCAGCAGCTAAGCCTCGCGCGCCTCCAGCCGTCGAACCCGAACCCGGAACCGCTCCACGCCCGCTCGCCCGAACCCGAAACCGAACCCGCGTCCGTGCCCACACGTGCCCAGCTCTCCCCGCGTGCAAGCCGCGCCGCGCCGCCTGCACTGCAAGCCGAGCCGCGCCTCCTTGCTGTCGCGAGCCGAGCCGCACGCGCAAGATCCTTGCGCCAAGCCGAGCCGAGCCGATCCCTGTTCTCCTTCCAGCCGAGCCGCCAAGCCTAATTTGGCCCCTTCCACCTAATTTTGGTAATTAAATCAACTATTTTGGCATTATCCAGTAAGATTCAATATTTTTGGGCACTAAATGATTTAATTTGGAATTAAATTAGATTATTTCTCCTTAAGGGACGTCCTGGACCAAGTAACTGCTGCAGCGGGGGATTTCTTCAGTAGGGGCTTGAGCACTGCAACCTCTCTCTAGGGTAAGTCATTTCAAATGAGTCTTGAACCGTTAGTCGTTGGTGACCTAATTACGAATCTTGGCATATTACACAGTTAGGACCTCGTCGCTTGGAAAGCATACTGCCTCGCGGTTAGGACTCGTCAAGTAAATCTCCAGGTAAGAGATTCTACTACTAGCTCCATGCTTAGAATTATGAGACTATGTATACTCCAATTTTGCATGTTGAGGATTAGACGGTACGATGCCTGAAATCAATGTTAGTATGATGTAAATGACGATATGGTTATACTATAGCCTGTTATGTGTGGCGAGAGCTGTTATAGCTATACGACAAATGTCGAGACGGAGAAGGTAGAGATGATTTATGTGATATGTTATATGCTGATGCCATGTGTATGTATACTGCAATTAGGGTACCTGTTAGCTTAATCTGTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGGGTGGTCCGACGGGACACCAGTCTAGCATGGATATAGATATGACTCGAGTGACTCGACGGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCCGGGGCTCCGAAGACCAGAGATACGTTCCTACGGGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTACAGGACTCTGACAGGAAGTTAACAGGCACCTAGTGGGACTAGTAGTGGGTCCCTTACTGAGTATTTTATACTCACTCTCTTCATTTTATATTTTCAGGTAGAGGACGAGGCAAGGGCAAGCTGGCGAGCGACCCGAAGTGACCGTGGAGGGCCATAGGGGCTACTGCTTCCGCTTATCCTTATTTTAGACTTTCGTATTTGAGTTTGAGTACTTTTCATTACTTATCATCTTTTTATGTAGATAGGGCCCAAGTAGGACTTTAGAACGCATTACACCTTTTTGCATAACTACCTTGTTTGAATTTTCATAAATAAAATTTCTTAAACGTTACGCGTTTTTAATAAATTTTATGACTTAAACCACTTGTTCTATATTTAGTAATGACTTCGATTCAGTATAAGGAGTTGGGTCGTTACACTTATTTTGTATTGTTTTTCAGGTTATTGACAAAGTTCAGGAAGAAACCAAAAGCCGTGCAGGTATATTGTTTATGCATTTTATAATATATAACGATTGTCAAATGAAATAAAAAGGTAAAATGTATTTGAATTTGGGAAATTTGAAATTAAAAAACCAATTAGTTCTTGAAGTTCTCCCAAAAAAAAATTAATAGATTAACTCTTAAATCTTTTCTTTCTGGAAACTTGTACAATATCCATGTTGTAAATCTGAAAAAAGATGGACATTCGATAACATCTCATAAAATACGAAATACTTTTTTTGCTAATGTTTGCATGTATTGGACTCCTGATTGTCCAGAACAACTATGCTATTAGAGACCAAGATAAATTATGCTATTATAGACCAAGATTAATTTCTCCTTTGCCCTTGGTTTCTGAAAAGTAAGGAAACTGATGCTTTGACACCAAATTTTCAGATAGGAAACCTCTGGGTGTAGGGCGTGGAAGAGGAAGAGGGCGGGAGGATGGTCCAGGTGGCAGGTCAGCTAAAGGAATGGGGCGAGGCTTTGATGATGGTGCGAAAGCTGCTTCTGGTGGCCGTGGAAAGGGTGGCCCTGGTGGGAAACCTGGTGCCATCAGAGGTAAACTAAACTGAATCTTTGTTACTTATAAAACTTGAATTTGCTGTTTTAGCTTCCCCATCTGATAACAGTTTTTCTTTTGCTTTTCTATGCCCTGTATAAACTATACCCCTTATCTATTTAATGTTTTCTTCGTTTAATTTTTCAACCTTTAAGAAGACTTGGGCCAAATTTTACAAACGAAATACAGGAATTTCATAAACTATTTCCGTTTTTCAGTTTTCTAAAATTTAGCTTTGACTTCAAAGTTGACTTGGAGTAGGTTAGAAATCAAAGGAAAAGGTTTAAATAGAAAATAGTACAAACAAGAAAAATGTTTGTAAAAAAAAAAAGGAAAAAAACTATAAACAAAAACGTTTACAAGTGGACTTCTTATCTCATCTTATTAAACTTATTTTTCTTTGTTTTTTCTGTTGATATAGTTGGAGGCAGGGGACGGGGTTGATCAGATTGATATCGGTAACAGATGAAATGGACTAACTACATATGCAAGCTCTTCCCAGTTTTCACGTCGGCAGCCGTGTGTTTTCCGTTTTATGCATTTTCTTTTGGTCTGGACTCTTTAGTGAATATATATGCGATTTTAGTGCCAGACCTCCGCTAAAATTGTTGTAGTGCTCAAAATTTCAACATTTATACTAATTTTTTAGGATTTAAAAAATTTTGGATGTTAAAATTAATTAGATTTATAAGAGAAAAGGAAAAGAAAAAAAGCTATAAAGTTTTGA ATGGAGATGAACCCAACACAAAATGGACCTCCCATGCACTCCAACGTGTTAGGGATGAGGCAATGTATTTTGGCGATGCGTGAAGGTCACGTGCGGCTAATTCTGGCGAGCAAGAACTCAGATAGGGGCGGATGGTCTTCTAGTGTCTGCTTCGTATCTTTAAAGATGCTTCCTCTTTCCCTCCTAAAGACTGCTCAAGGACACCCAATGTTGGTGGAATTAAAAAACGGTGAGACATACAACGGCCATTTGGTTAATTGTGACACATGGATGAACATTCATCTTCGGGAAGTCATCTGCACTTCTAAAGACGGTGATCGGTTTTGGCGAATGCCCGAATTTTATATCCGTGGTAATACAATCAAGTATTTGCGAGTTCCAGATGAGGGAAGCCTTATTAAACTAAAGTTGGTTGTTTTTGGTGAGATTTGGGGAGAGAGAGGAGAGGTAGAGGACGAGGCAAGGGCAAGCTGGCGAGCGACCCGAAATAGGAAACCTCTGGGTGTAGGGCGTGGAAGAGGAAGAGGGCGGGAGGATGGTCCAGGTGGCAGGTCAGCTAAAGGAATGGGGCGAGGCTTTGATGATGGTGCGAAAGCTGCTTCTGGTGGCCGTGGAAAGGGTGGCCCTGGTGGGAAACCTGGTGCCATCAGAGCTTTGACTTCAAAGTTGACTTGGAGTAGTTGGAGGCAGGGGACGGGGTTGATCAGATTGATATCGGTAACAGATGAAATGGACTAACTACATATGCAAGCTCTTCCCAGTTTTCACGTCGGCAGCCGTGTGTTTTCCGTTTTATGCATTTTCTTTTGGTCTGGACTCTTTAGTGAATATATATGCGATTTTAGTGCCAGACCTCCGCTAAAATTGTTGTAGTGCTCAAAATTTCAACATTTATACTAATTTTTTAGGATTTAAAAAATTTTGGATGTTAAAATTAATTAGATTTATAAGAGAAAAGGAAAAGAAAAAAAGCTATAAAGTTTTGA ATGGAGATGAACCCAACACAAAATGGACCTCCCATGCACTCCAACGTGTTAGGGATGAGGCAATGTATTTTGGCGATGCGTGAAGGTCACGTGCGGCTAATTCTGGCGAGCAAGAACTCAGATAGGGGCGGATGGTCTTCTAGTGTCTGCTTCGTATCTTTAAAGATGCTTCCTCTTTCCCTCCTAAAGACTGCTCAAGGACACCCAATGTTGGTGGAATTAAAAAACGGTGAGACATACAACGGCCATTTGGTTAATTGTGACACATGGATGAACATTCATCTTCGGGAAGTCATCTGCACTTCTAAAGACGGTGATCGGTTTTGGCGAATGCCCGAATTTTATATCCGTGGTAATACAATCAAGTATTTGCGAGTTCCAGATGAGGGAAGCCTTATTAAACTAAAGTTGGTTGTTTTTGGTGAGATTTGGGGAGAGAGAGGAGAGGTAGAGGACGAGGCAAGGGCAAGCTGGCGAGCGACCCGAAATAGGAAACCTCTGGGTGTAGGGCGTGGAAGAGGAAGAGGGCGGGAGGATGGTCCAGGTGGCAGGTCAGCTAAAGGAATGGGGCGAGGCTTTGATGATGGTGCGAAAGCTGCTTCTGGTGGCCGTGGAAAGGGTGGCCCTGGTGGGAAACCTGGTGCCATCAGAGCTTTGACTTCAAAGTTGACTTGGAGTAGTTGGAGGCAGGGGACGGGGTTGATCAGATTGATATCGGTAACAGATGAAATGGACTAA MEMNPTQNGPPMHSNVLGMRQCILAMREGHVRLILASKNSDRGGWSSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRALTSKLTWSSWRQGTGLIRLISVTDEMD Homology
BLAST of MELO3C024092 vs. NCBI nr
Match: XP_038896461.1 (uncharacterized protein LOC120084721 [Benincasa hispida]) HSP 1 Score: 256.5 bits (654), Expect = 2.3e-64 Identity = 134/172 (77.91%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of MELO3C024092 vs. NCBI nr
Match: XP_008461936.1 (PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 4.3e-63 Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of MELO3C024092 vs. NCBI nr
Match: KAG6592199.1 (hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244.6 bits (623), Expect = 9.0e-61 Identity = 129/172 (75.00%), Postives = 136/172 (79.07%), Query Frame = 0
BLAST of MELO3C024092 vs. NCBI nr
Match: XP_008454536.1 (PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] >XP_008454538.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] >XP_008454539.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo]) HSP 1 Score: 244.6 bits (623), Expect = 9.0e-61 Identity = 127/162 (78.40%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MELO3C024092 vs. NCBI nr
Match: KAA0046492.1 (putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] >TYJ97721.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa]) HSP 1 Score: 244.6 bits (623), Expect = 9.0e-61 Identity = 127/162 (78.40%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy Swiss-Prot
Match: Q43582 (Probable U6 snRNA-associated Sm-like protein LSm4 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.6e-47 Identity = 105/160 (65.62%), Postives = 114/160 (71.25%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy Swiss-Prot
Match: Q9LGE6 (Probable U6 snRNA-associated Sm-like protein LSm4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0256900 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.3e-46 Identity = 107/160 (66.88%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy Swiss-Prot
Match: Q9ZRU9 (Probable U6 snRNA-associated Sm-like protein LSm4 OS=Fagus sylvatica OX=28930 GN=LSM4 PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 5.5e-45 Identity = 102/160 (63.75%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy Swiss-Prot
Match: F4K4E3 (Sm-like protein LSM4 OS=Arabidopsis thaliana OX=3702 GN=LSM4 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.8e-43 Identity = 99/152 (65.13%), Postives = 109/152 (71.71%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy Swiss-Prot
Match: Q3ZBK6 (U6 snRNA-associated Sm-like protein LSm4 OS=Bos taurus OX=9913 GN=LSM4 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34 Identity = 83/150 (55.33%), Postives = 99/150 (66.00%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy TrEMBL
Match: A0A0A0L3Q6 (U6 snRNA-associated Sm-like protein LSm4 OS=Cucumis sativus OX=3659 GN=LSM4 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 5.0e-65 Identity = 134/172 (77.91%), Postives = 141/172 (81.98%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy TrEMBL
Match: A0A1S3CFQ0 (U6 snRNA-associated Sm-like protein LSm4 OS=Cucumis melo OX=3656 GN=LOC103500419 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.1e-63 Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy TrEMBL
Match: A0A1S3BYD6 (U6 snRNA-associated Sm-like protein LSm4 OS=Cucumis melo OX=3656 GN=LOC103494929 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 4.3e-61 Identity = 127/162 (78.40%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy TrEMBL
Match: A0A5D3BGF1 (U6 snRNA-associated Sm-like protein LSm4 OS=Cucumis melo var. makuwa OX=1194695 GN=LSM4 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 4.3e-61 Identity = 127/162 (78.40%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MELO3C024092 vs. ExPASy TrEMBL
Match: A0A6J1CRC5 (U6 snRNA-associated Sm-like protein LSm4 OS=Momordica charantia OX=3673 GN=LOC111013478 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60 Identity = 124/162 (76.54%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MELO3C024092 vs. TAIR 10
Match: AT5G27720.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 177.6 bits (449), Expect = 1.3e-44 Identity = 99/152 (65.13%), Postives = 109/152 (71.71%), Query Frame = 0
BLAST of MELO3C024092 vs. TAIR 10
Match: AT1G20580.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10 Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of MELO3C024092 vs. TAIR 10
Match: AT1G76300.1 (snRNP core protein SMD3 ) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 42/136 (30.88%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of MELO3C024092 vs. TAIR 10
Match: AT4G02840.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08 Identity = 43/114 (37.72%), Postives = 54/114 (47.37%), Query Frame = 0
BLAST of MELO3C024092 vs. TAIR 10
Match: AT3G07590.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07 Identity = 39/111 (35.14%), Postives = 51/111 (45.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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