MELO3C024038.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C024038.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	LOB domain-containing protein
Location	chr04: 23501584 .. 23503295 (+)
RNA-Seq Expression	MELO3C024038.jh1
Synteny	MELO3C024038.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTTCTTTCTTTGCACTTTTTTCTAGTCTACTCGTGCACCATTTCTTACCCTTTCTTCTTTATTCCCATGGCTTCTTCTTCTTCTACATCCACGAACACGAGCGTGTCGGGGTGTGGTGGTAGCGGTGGCGGTGGTTCGCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCGAGATTTGCTGCCATTCATAAAGTGTTCGGAGCAAGTAATGTTTCGAAGTTGTTGCTTCATGTTCCTGTTCACGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGTCGATCATTTTGTTTTTCTACTTTATGATTTGTTTTTGTTTAAATATCATCACTTATTAGCTCGATCATTGTTTAATTTTGCAGTGATGAATGATTAAGAATATGAATAAAAGATCTGATTTTTCAGACTAGCTCTGTTTGAGTTTTGAAAATTAATTAAAAACTTAACAATATTACTATTTAATTAATTTGTGAATTTCCTTGTTTTGTATTTAATTTCATTTTTTAGGGAGTCTTTAAAAGTGAAACGAAAGTTTCATAGTTTCAAATTTAAAAAACTTAAGAATTAATTGTTTTGTTTTTTAAATTTGGCTAAAAATTGTTGAAAAAGTTTCCCCCTTGTTGAAACCTTGTAGAACGAGGGTAAAAAAACAAATAGAAACAGAAAATTGAAAACAAATGATTGTTATAATTGGTGTGCCTAAAAGTTAGATTTGTTAATAACCCCATACACAATTTTTTAGCTTAATGGCGATTGTTTATTGAAGAGTTACCTAATATTGTTTTATTTGTTGTTTGTTTTCATTGTGTAAGCAAAAAAATAAAAATAAAAATAAAAAAGGAGTTCATATTGGAGATGCAAAATTTCACTTGATACAATCCATTAATCTAACAGAACTTTAAAAGCATCAACTTTTAAACAAGTCCTCTCTTTTTTTTCTTTTTTTTTTTTTCCTTACTCGATTCAAGTTTGTTTGAATTGTCCTTTAATCACACTTAGAAAGTCGAGACAAATTACAAAATTGAATTGAAAGAATCCTTTTTTTTTTTTGGGTTTTTGAAGGTGGCATACTTACAAACACAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAGCAACCTCTCGAATGGATCAATTCCAAATAACAATTATCAAACTCAAATTATGAACAACCCAACCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCGCAAGAACCTCAAATTCTTCAACCATTTCCTAGAAAAAAATTATCTTCTTCTCATGCAGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAACTAATTAATTAATGAAGACGAAAGTCATGTGTAATTTTGTGAAGAACAGTGGATTTTGATGATATATCTATAGTCATTTTATGAGACCAAAAAGTTGTGTGTATATAGTGACTATATCAGCCATTTATGTTCAATCTTTATTCTCTCTC

mRNA sequence

ACTCTTCTTTCTTTGCACTTTTTTCTAGTCTACTCGTGCACCATTTCTTACCCTTTCTTCTTTATTCCCATGGCTTCTTCTTCTTCTACATCCACGAACACGAGCGTGTCGGGGTGTGGTGGTAGCGGTGGCGGTGGTTCGCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCGAGATTTGCTGCCATTCATAAAGTGTTCGGAGCAAGTAATGTTTCGAAGTTGTTGCTTCATGTTCCTGTTCACGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTACAAACACAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAGCAACCTCTCGAATGGATCAATTCCAAATAACAATTATCAAACTCAAATTATGAACAACCCAACCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCGCAAGAACCTCAAATTCTTCAACCATTTCCTAGAAAAAAATTATCTTCTTCTCATGCAGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAACTAATTAATTAATGAAGACGAAAGTCATGTGTAATTTTGTGAAGAACAGTGGATTTTGATGATATATCTATAGTCATTTTATGAGACCAAAAAGTTGTGTGTATATAGTGACTATATCAGCCATTTATGTTCAATCTTTATTCTCTCTC

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTACATCCACGAACACGAGCGTGTCGGGGTGTGGTGGTAGCGGTGGCGGTGGTTCGCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCGAGATTTGCTGCCATTCATAAAGTGTTCGGAGCAAGTAATGTTTCGAAGTTGTTGCTTCATGTTCCTGTTCACGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTACAAACACAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAGCAACCTCTCGAATGGATCAATTCCAAATAACAATTATCAAACTCAAATTATGAACAACCCAACCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCGCAAGAACCTCAAATTCTTCAACCATTTCCTAGAAAAAAATTATCTTCTTCTCATGCAGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAACTAA

Protein sequence

MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN

Homology

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BLAST of MELO3C024038.jh1 vs. NCBI nr
Match: XP_008461877.1 (PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 460 bits (1184), Expect = 3.36e-163
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60
           MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180
           QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN
Sbjct: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180

Query: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236
           DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN
Sbjct: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

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BLAST of MELO3C024038.jh1 vs. NCBI nr
Match: XP_004152037.2 (LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 431 bits (1108), Expect = 1.55e-151
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGS----GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

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BLAST of MELO3C024038.jh1 vs. NCBI nr
Match: KAE8650674.1 (hypothetical protein Csa_009642 [Cucumis sativus])

HSP 1 Score: 431 bits (1108), Expect = 1.04e-150
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGS----GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 54  MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 113

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 114 AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 173

Query: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 174 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 233

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 234 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 293

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BLAST of MELO3C024038.jh1 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 364 bits (934), Expect = 4.99e-125
Identity = 207/244 (84.84%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGSGG-GGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60
           MASSSS+S +    G GG GG GGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH
Sbjct: 1   MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60

Query: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120
           KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120

Query: 121 MQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNN---NYQTQIMNNP---TPQSS 180
           MQAKAQLAQTLMDS  NMEIQWT +FNN NLSNG IPNN   NYQTQIMNN    +PQSS
Sbjct: 121 MQAKAQLAQTLMDSRGNMEIQWTENFNN-NLSNG-IPNNFQNNYQTQIMNNNPAVSPQSS 180

Query: 181 LESAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHA-DLGELHALALR 236
           LESAANNDEALLFINQ   FHESQ SRS +E Q LQPFP KKL SSH  DLGEL ALALR
Sbjct: 181 LESAANNDEALLFINQIHNFHESQ-SRSPEESQFLQPFPTKKLPSSHVHDLGELQALALR 240

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BLAST of MELO3C024038.jh1 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima])

HSP 1 Score: 315 bits (807), Expect = 6.34e-106
Identity = 184/244 (75.41%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 1   MASSSSTST--NTSVSGCGGSGGGG-----SPCGACKFLRRKCVADCIFAPYFCSEQGAA 60
           MASSSS+S+  N+SVSG GG GGGG     SPCGACKFLRRKCVA+CIFAPYF SEQGAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVA 120
           RFAA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQTQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQS 180
           YLQ QLMQAKAQLAQTLMDSG NME+QWTG FNN NLSNG IP+N Y+TQIMN   +PQS
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNN-NLSNG-IPSN-YETQIMNPAVSPQS 180

Query: 181 SLESAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALR 236
           S+ESAANND AL+F+N  Q            E Q L    R++ +S H DLGEL ALALR
Sbjct: 181 SVESAANNDAALMFMNHYQ------------ESQTL---ARRRSASCHGDLGELQALALR 226

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BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-54
Identity = 136/242 (56.20%), Postives = 164/242 (67.77%), Query Frame = 0


Query: 14  SGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLH 73
           SG G + G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 74  VPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA--QTL- 133
           VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A  QT  
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSA 123

Query: 134 ------MDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQI----MNNP-TPQSSLESAAN 193
                     +N  + W     +   S  S P N++Q        NNP +PQSSLE + +
Sbjct: 124 AGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFS 183

Query: 194 N--DEALLFINQNQLFHESQLSRSSQEP-QILQPFPRKKLSSSH--ADLGELHALALRMM 237
           N   +     N  +  H++       +     + +P KK S S+  +DLGEL ALALRMM
Sbjct: 184 NTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMM 243

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BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-42
Identity = 89/116 (76.72%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 14  SGCGGS--GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLL 73
           SG GGS  GGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 74  LHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 128
           LH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

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BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.6e-41
Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 21  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 80
           G GSPCGACKFLRRKCV  C+FAPYFC EQGAA FAAIHKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 81  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQ 129
           EA VTI+YEAQAR+ DP+YGCVAHIFALQQQV  LQ QL   KA  AQ
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

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BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 19  SGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHD 78
           S   GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P+ D
Sbjct: 5   SSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISD 64

Query: 79  RCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGS 136
           RCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q AQ+++ + S
Sbjct: 65  RCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

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BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39
Identity = 87/122 (71.31%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 6   STSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGAS 65
           S+S N S S    SGGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGAS
Sbjct: 2   SSSGNPSSS----SGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGAS 61

Query: 66  NVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQ 125
           NVSKLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L   +A 
Sbjct: 62  NVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAH 119

Query: 126 LA 128
           LA
Sbjct: 122 LA 119

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BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 1.63e-163
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60
           MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180
           QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN
Sbjct: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180

Query: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236
           DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN
Sbjct: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

[Close]

BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 1.63e-163
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60
           MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180
           QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN
Sbjct: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAANN 180

Query: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236
           DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN
Sbjct: 181 DEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

[Close]

BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 431 bits (1108), Expect = 7.50e-152
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MASSSSTSTNTSVSGCGGS----GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

[Close]

BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 315 bits (807), Expect = 3.07e-106
Identity = 184/244 (75.41%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 1   MASSSSTST--NTSVSGCGGSGGGG-----SPCGACKFLRRKCVADCIFAPYFCSEQGAA 60
           MASSSS+S+  N+SVSG GG GGGG     SPCGACKFLRRKCVA+CIFAPYF SEQGAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVA 120
           RFAA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQTQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQS 180
           YLQ QLMQAKAQLAQTLMDSG NME+QWTG FNN NLSNG IP+N Y+TQIMN   +PQS
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNN-NLSNG-IPSN-YETQIMNPAVSPQS 180

Query: 181 SLESAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALR 236
           S+ESAANND AL+F+N  Q            E Q L    R++ +S H DLGEL ALALR
Sbjct: 181 SVESAANNDAALMFMNHYQ------------ESQTL---ARRRSASCHGDLGELQALALR 226

[Close]

BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 4.19e-103
Identity = 180/240 (75.00%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 1   MASSSSTST--NTSVSGCGGSGGGG-SPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 60
           MASSSS+S+  N+SVSG GG GGGG SPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 60

Query: 61  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 120
           +HKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ 
Sbjct: 61  VHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVACLQA 120

Query: 121 QLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQSSLES 180
           QLMQAKAQLAQTLM+SG NME+QWTG FNN NLSNG IP+N Y+TQIMN   +PQSS+ES
Sbjct: 121 QLMQAKAQLAQTLMESGGNMELQWTGSFNN-NLSNG-IPSN-YETQIMNPAVSPQSSVES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236
           AANND AL+F+N  Q            E Q L    R++ +S H DLGEL ALALRMMRN
Sbjct: 181 AANNDAALMFMNHYQ------------ESQTL---GRRRSASCHGDLGELQALALRMMRN 222

[Close]

BLAST of MELO3C024038.jh1 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-55
Identity = 136/242 (56.20%), Postives = 164/242 (67.77%), Query Frame = 0


Query: 14  SGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLH 73
           SG G + G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 74  VPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA--QTL- 133
           VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A  QT  
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSA 123

Query: 134 ------MDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQI----MNNP-TPQSSLESAAN 193
                     +N  + W     +   S  S P N++Q        NNP +PQSSLE + +
Sbjct: 124 AGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFS 183

Query: 194 N--DEALLFINQNQLFHESQLSRSSQEP-QILQPFPRKKLSSSH--ADLGELHALALRMM 237
           N   +     N  +  H++       +     + +P KK S S+  +DLGEL ALALRMM
Sbjct: 184 NTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMM 243

[Close]

BLAST of MELO3C024038.jh1 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-43
Identity = 89/116 (76.72%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 14  SGCGGS--GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLL 73
           SG GGS  GGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 74  LHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 128
           LH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

[Close]

BLAST of MELO3C024038.jh1 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 167.9 bits (424), Expect = 9.6e-42
Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 19  SGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHD 78
           S   GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P+ D
Sbjct: 5   SSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISD 64

Query: 79  RCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGS 136
           RCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q AQ+++ + S
Sbjct: 65  RCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

[Close]

BLAST of MELO3C024038.jh1 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-40
Identity = 87/122 (71.31%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 6   STSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGAS 65
           S+S N S S    SGGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGAS
Sbjct: 2   SSSGNPSSS----SGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGAS 61

Query: 66  NVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQ 125
           NVSKLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L   +A 
Sbjct: 62  NVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAH 119

Query: 126 LA 128
           LA
Sbjct: 122 LA 119

[Close]

BLAST of MELO3C024038.jh1 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 21  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 80
           G GSPCGACKFLRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 81  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 132
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  Q++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

The following BLAST results are available for this feature:

BLAST of MELO3C024038.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461877.1	3.36e-163	100.00	PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domai...	[more]
XP_004152037.2	1.55e-151	93.78	LOB domain-containing protein 16 [Cucumis sativus]	[more]
KAE8650674.1	1.04e-150	93.78	hypothetical protein Csa_009642 [Cucumis sativus]	[more]
XP_038888851.1	4.99e-125	84.84	LOB domain-containing protein 16-like [Benincasa hispida]	[more]
XP_022967414.1	6.34e-106	75.41	LOB domain-containing protein 16-like [Cucurbita maxima]	[more]

BLAST of MELO3C024038.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLB7	2.1e-54	56.20	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
O22131	5.5e-42	76.72	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q5UG13	4.6e-41	77.78	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9M2J7	1.3e-40	68.38	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
O81323	1.5e-39	71.31	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]

BLAST of MELO3C024038.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C536	1.63e-163	100.00	LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CG76	1.63e-163	100.00	LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV...	[more]
A0A0A0LAE8	7.50e-152	93.78	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV...	[more]
A0A6J1HWM7	3.07e-106	75.41	LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695...	[more]
A0A6J1HIG3	4.19e-103	75.00	LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]

BLAST of MELO3C024038.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42430.1	1.5e-55	56.20	lateral organ boundaries-domain 16	[more]
AT2G45420.1	3.9e-43	76.72	LOB domain-containing protein 18	[more]
AT3G58190.1	9.6e-42	68.38	lateral organ boundaries-domain 29	[more]
AT4G00220.1	1.1e-40	71.31	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G42440.1	1.2e-39	70.27	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 25..123 e-value: 2.7E-36 score: 124.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 24..126 score: 22.677494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 12..235
None	No IPR available	PANTHER	PTHR31529:SF23	LOB DOMAIN-CONTAINING PROTEIN 16	coord: 12..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024038.jh1.t1	MELO3C024038.jh1.t1	mRNA