MELO3C024019.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGGGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACAGGCAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGTTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGGGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACAGGCAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGTTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGGGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACAGGCAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGTTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA MSSNFQSDSISRYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVFPLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVALIDRVQMIWREETGKSRGGSRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI Homology
BLAST of MELO3C024019.jh1 vs. NCBI nr
Match: KAA0052771.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK04185.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 432 bits (1112), Expect = 5.88e-153 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. NCBI nr
Match: XP_038905732.1 (E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]) HSP 1 Score: 254 bits (650), Expect = 2.16e-82 Identity = 135/229 (58.95%), Postives = 166/229 (72.49%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. NCBI nr
Match: XP_038876865.1 (putative RING-H2 finger protein ATL53 [Benincasa hispida]) HSP 1 Score: 182 bits (461), Expect = 1.22e-53 Identity = 109/226 (48.23%), Postives = 139/226 (61.50%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. NCBI nr
Match: KAE8650076.1 (hypothetical protein Csa_011336 [Cucumis sativus]) HSP 1 Score: 163 bits (412), Expect = 3.43e-46 Identity = 100/237 (42.19%), Postives = 136/237 (57.38%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. NCBI nr
Match: KAG6605180.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157 bits (396), Expect = 4.27e-44 Identity = 93/221 (42.08%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy Swiss-Prot
Match: P90990 (E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 PE=3 SV=3) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07 Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 8.8e-07 Identity = 24/81 (29.63%), Postives = 41/81 (50.62%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZV51 (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 22/82 (26.83%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy Swiss-Prot
Match: Q9Y7K6 (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06 Identity = 22/65 (33.85%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06 Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BYE9 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00110 PE=4 SV=1) HSP 1 Score: 432 bits (1112), Expect = 2.85e-153 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G7R8 (E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451612 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 2.07e-44 Identity = 93/221 (42.08%), Postives = 140/221 (63.35%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 4.13e-39 Identity = 87/224 (38.84%), Postives = 133/224 (59.38%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 1.11e-37 Identity = 87/217 (40.09%), Postives = 131/217 (60.37%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1) HSP 1 Score: 139 bits (350), Expect = 1.56e-37 Identity = 83/209 (39.71%), Postives = 132/209 (63.16%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. TAIR 10
Match: AT5G67120.1 (RING/U-box superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 6.1e-11 Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.8e-10 Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. TAIR 10
Match: AT3G30460.1 (RING/U-box superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 2.8e-08 Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. TAIR 10
Match: AT2G37150.1 (RING/U-box superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-08 Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0
BLAST of MELO3C024019.jh1 vs. TAIR 10
Match: AT2G37150.2 (RING/U-box superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-08 Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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