|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAGTTGAATCTGAAGCTCTCAGGGAGATTACAAGTGAAAACTCATTAGGAGAAGAATCTTCCCAAATGTTAAAAGAAATCGATGAAGGGAAGATCCTTGTTCAAGTAAGTTTAGTTGCGAGGGAACATACACAGAAGATTGAAAGGATGAAACCAAAAGAAAAAAGAAAGAAGAAGGAAGAGGCTGAGGGGCTCCATGAAAGAGAAGAAAAGGAGAGCAAGAAAGAGGATGCAAAGAGGGAGAGATCAAAGAAGAGAAACTTGAATGTGCGAAGGGCAAGATGGCCGGTGACAAGAACTTGGAAGAAGAGGAAACGTAGTGCAAAGAAGGTAGAAGCATCGGAGAGGAAACAAAAGGAATGGACAAAAAAAAGAGGCAAGCAAATAAATAATCATTGGAAGGAGTGTTATTCGAAGAACAAATGGCGGAAAAATCGAACATCACAGATGATAGAAGTCGATCAAGGACAAAGGCAAGGGTGGCCTGGAATGATCGAAGACGATTGCGAACGAAGGATTGGAGAAGATGAATGCGAACAAGCTGTTGGATCTGAAAGCCAAGAAGACGATGGTCAACACCAATGGCAAAGCAGAAGGTGTTCGAAGGTGAGTGTGAGCTGGTGGTTAATGCCGAAAGCAATCGTGAAGTTTTGA mRNA sequence ATGGGAGTTGAATCTGAAGCTCTCAGGGAGATTACAAGTGAAAACTCATTAGGAGAAGAATCTTCCCAAATGTTAAAAGAAATCGATGAAGGGAAGATCCTTGTTCAAGAAAAAAGAAAGAAGAAGGAAGAGGCTGAGGGGCTCCATGAAAGAGAAGAAAAGGAGAGCAAGAAAGAGGATGCAAAGAGGGAGAGATCAAAGAAGAGAAACTTGAATGTGCGAAGGGCAAGATGGCCGGTGACAAGAACTTGGAAGAAGAGGAAACGTAGTGCAAAGAAGGTAGAAGCATCGGAGAGGAAACAAAAGGAATGGACAAAAAAAAGAGGCAAGCAAATAAATAATCATTGGAAGGAGTGTTATTCGAAGAACAAATGGCGGAAAAATCGAACATCACAGATGATAGAAGTCGATCAAGGACAAAGGCAAGGGTGGCCTGGAATGATCGAAGACGATTGCGAACGAAGGATTGGAGAAGATGAATGCGAACAAGCTGTTGGATCTGAAAGCCAAGAAGACGATGGTCAACACCAATGGCAAAGCAGAAGGTGTTCGAAGGTGAGTGTGAGCTGGTGGTTAATGCCGAAAGCAATCGTGAAGTTTTGA Coding sequence (CDS) ATGGGAGTTGAATCTGAAGCTCTCAGGGAGATTACAAGTGAAAACTCATTAGGAGAAGAATCTTCCCAAATGTTAAAAGAAATCGATGAAGGGAAGATCCTTGTTCAAGAAAAAAGAAAGAAGAAGGAAGAGGCTGAGGGGCTCCATGAAAGAGAAGAAAAGGAGAGCAAGAAAGAGGATGCAAAGAGGGAGAGATCAAAGAAGAGAAACTTGAATGTGCGAAGGGCAAGATGGCCGGTGACAAGAACTTGGAAGAAGAGGAAACGTAGTGCAAAGAAGGTAGAAGCATCGGAGAGGAAACAAAAGGAATGGACAAAAAAAAGAGGCAAGCAAATAAATAATCATTGGAAGGAGTGTTATTCGAAGAACAAATGGCGGAAAAATCGAACATCACAGATGATAGAAGTCGATCAAGGACAAAGGCAAGGGTGGCCTGGAATGATCGAAGACGATTGCGAACGAAGGATTGGAGAAGATGAATGCGAACAAGCTGTTGGATCTGAAAGCCAAGAAGACGATGGTCAACACCAATGGCAAAGCAGAAGGTGTTCGAAGGTGAGTGTGAGCTGGTGGTTAATGCCGAAAGCAATCGTGAAGTTTTGA Protein sequence MGVESEALREITSENSLGEESSQMLKEIDEGKILVQEKRKKKEEAEGLHEREEKESKKEDAKRERSKKRNLNVRRARWPVTRTWKKRKRSAKKVEASERKQKEWTKKRGKQINNHWKECYSKNKWRKNRTSQMIEVDQGQRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQSRRCSKVSVSWWLMPKAIVKF
Homology
BLAST of MELO3C023704 vs. NCBI nr
Match: KAA0052861.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 227.6 bits (579), Expect = 9.3e-56 Identity = 141/203 (69.46%), Postives = 144/203 (70.94%), Query Frame = 0 Query: 1 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ------------------EKRKKK 60 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ EKRKKK Sbjct: 44 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQVSLVAREHTQKIERMKPKEKRKKK 103
Query: 61 EEAEGLHEREEKESKKEDAKRERSKKRNLNVRRARWPVTRTWKKRKRSAKKVEASERKQK 120 EEAEGLHEREEKESKKEDAKRERSKKRNLNV+RARWP+TRTWKKRKRSAKK Sbjct: 104 EEAEGLHEREEKESKKEDAKRERSKKRNLNVQRARWPMTRTWKKRKRSAKK--------- 163
Query: 121 EWTKKRGKQINNHWKECYSKNKWRKNRTSQMIEVDQGQRQGWPGMIEDDCERRIGEDECE 180 MIEVD+ QRQGWPGMIEDDCERRIGEDECE Sbjct: 164 ------------------------------MIEVDRRQRQGWPGMIEDDCERRIGEDECE 207
Query: 181 QAVGSESQEDDGQHQWQSRRCSK 186 QAVGSESQEDDGQHQWQS RCSK Sbjct: 224 QAVGSESQEDDGQHQWQSGRCSK 207
BLAST of MELO3C023704 vs. NCBI nr
Match: TYK04365.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-52 Identity = 131/185 (70.81%), Postives = 134/185 (72.43%), Query Frame = 0 Query: 1 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQEKRKKKEEAEGLHEREEKESKKED 60 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ GLHEREEKESKKED Sbjct: 44 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ----------GLHEREEKESKKED 103
Query: 61 AKRERSKKRNLNVRRARWPVTRTWKKRKRSAKKVEASERKQKEWTKKRGKQINNHWKECY 120 AKRERSKKRNLNV+RARWP+TRTWKKRKRSAKK Sbjct: 104 AKRERSKKRNLNVQRARWPMTRTWKKRKRSAKK--------------------------- 163
Query: 121 SKNKWRKNRTSQMIEVDQGQRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS 180 MIEVD+ QRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS Sbjct: 164 ------------MIEVDRRQRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS 179
Query: 181 RRCSK 186 RCSK Sbjct: 224 GRCSK 179
BLAST of MELO3C023704 vs. ExPASy TrEMBL
Match: A0A5A7UH45 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00120 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 4.5e-56 Identity = 141/203 (69.46%), Postives = 144/203 (70.94%), Query Frame = 0 Query: 1 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ------------------EKRKKK 60 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ EKRKKK Sbjct: 44 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQVSLVAREHTQKIERMKPKEKRKKK 103
Query: 61 EEAEGLHEREEKESKKEDAKRERSKKRNLNVRRARWPVTRTWKKRKRSAKKVEASERKQK 120 EEAEGLHEREEKESKKEDAKRERSKKRNLNV+RARWP+TRTWKKRKRSAKK Sbjct: 104 EEAEGLHEREEKESKKEDAKRERSKKRNLNVQRARWPMTRTWKKRKRSAKK--------- 163
Query: 121 EWTKKRGKQINNHWKECYSKNKWRKNRTSQMIEVDQGQRQGWPGMIEDDCERRIGEDECE 180 MIEVD+ QRQGWPGMIEDDCERRIGEDECE Sbjct: 164 ------------------------------MIEVDRRQRQGWPGMIEDDCERRIGEDECE 207
Query: 181 QAVGSESQEDDGQHQWQSRRCSK 186 QAVGSESQEDDGQHQWQS RCSK Sbjct: 224 QAVGSESQEDDGQHQWQSGRCSK 207
BLAST of MELO3C023704 vs. ExPASy TrEMBL
Match: A0A5D3BYY1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00370 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 6.1e-53 Identity = 131/185 (70.81%), Postives = 134/185 (72.43%), Query Frame = 0 Query: 1 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQEKRKKKEEAEGLHEREEKESKKED 60 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ GLHEREEKESKKED Sbjct: 44 MGVESEALREITSENSLGEESSQMLKEIDEGKILVQ----------GLHEREEKESKKED 103
Query: 61 AKRERSKKRNLNVRRARWPVTRTWKKRKRSAKKVEASERKQKEWTKKRGKQINNHWKECY 120 AKRERSKKRNLNV+RARWP+TRTWKKRKRSAKK Sbjct: 104 AKRERSKKRNLNVQRARWPMTRTWKKRKRSAKK--------------------------- 163
Query: 121 SKNKWRKNRTSQMIEVDQGQRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS 180 MIEVD+ QRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS Sbjct: 164 ------------MIEVDRRQRQGWPGMIEDDCERRIGEDECEQAVGSESQEDDGQHQWQS 179
Query: 181 RRCSK 186 RCSK Sbjct: 224 GRCSK 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0052861.1 | 9.3e-56 | 69.46 | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] | [more] |
TYK04365.1 | 1.3e-52 | 70.81 | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UH45 | 4.5e-56 | 69.46 | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... | [more] |
A0A5D3BYY1 | 6.1e-53 | 70.81 | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 35..74 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 161..181 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..109 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 94..109 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 23..67 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 68..93 |
Relationships
The following mRNA feature(s) are a part of this gene:
|