MELO3C023682 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTCTCATTTCCTTTTCTACTTTACATTTATCAGTCTTCTGGTTGCTCTAATTTGTGGGTTATCAAACACTTTTGTTCATTCTTCCCTTAAACTCTTTCAATTTTTTTCATGTAGTTTTAAGTTCGCAACGATTTATAGTCTTTCAATATGGTTAAGTTATAAGCATTTTTTATGAACTTTTTCATATCTTTGAACTTTTGAAAGTATATTATCGTTATTAACAGGTTTCTTAAACCTTCATATTTGTGGTCTTTAGTATACTCATCAACTTTTTTACATAAAATTGACAGTTGATGGACGTATTAGATACATATATGAAAGTCTAAAGACTTATTTTAATGTTCAGTGACTTATTTGACAAAAATTTAGAAGTCCAAGGACAATTTGTAGCCTAACCTTTAAAATTTGTACATAGAAGAAAACAGATGCCTTGTATACTGCTCTCGTTGCCCTTTCTGTTTTGCTAGCGCAGGAATCTCTTGTGCTAAACATACAAAAATGTTAAGTTATTGAATAAATAGATATCCAGCAAATTTCATTTTGACCACTGAATGCTTTTGAACTGCTTTCCTTTTTATCTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTAAATGCTGCTTGATATTCCTCTTTTAAGTTTTAACCTAACTAAAGATGATGATGAAGAGCTACAAAAGAAACAAATGGCTTCTACCTCAAACAGTTTCTTCATCAGATTAGAGAAACTAATGAAACTTGATCAACCACTTAAACTAATAAGATATTAGACTGGATTGTTAGGCTGGTGCTTTGAGTGGTTTTCAGTCTCCACACTGAAGGATGACTTAATTGGTGACCATCCACTTAGAATTTTAAAATTGAACGAGTTTCTTGACAGTTAAAAGGAAACCAACAATTATCTTTGGAATTTGTGTTGGGACACATCCTTGTTGACTAGAGGAGTAGAGTGATGCCTGTATCTATAAACATGGTAAAGAAAGATCCAATGATATCTATTTCCGATTAATTTCTCTGCCTGGAAATGAAAATTGTCATTCTAATTGGACATCTCCGTGCAAGTTAATTTCATGTTCATTTTGATTAAAGAAAGACATGAACAATGGACATGATACAATTTGCTTTTGTGTTGCAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGGTGCATTTCCCCAAAACTTTATGCTTCTTGTTCAGCTTTCCATTTCAAAGAAACTATACTGCCACCTCTCACTCTTCTGAGTCCTGACTTTGTTATTATTCTGTGAAGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGTAAGAGCCTACGAAGTACACCTTGTTTATATAGGGTTAAAATCATATAAGATATCAATCGTGATCCATTAGAACTAAAGAAAGCATTTTTCTTTGGTTTAGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA ATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGA MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV Homology
BLAST of MELO3C023682 vs. NCBI nr
Match: XP_008461486.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 548.1 bits (1411), Expect = 4.1e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of MELO3C023682 vs. NCBI nr
Match: KAA0037784.1 (psbP domain-containing protein 4 [Cucumis melo var. makuwa] >TYK27307.1 psbP domain-containing protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 543.5 bits (1399), Expect = 1.0e-150 Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of MELO3C023682 vs. NCBI nr
Match: XP_004139653.1 (psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN44513.1 hypothetical protein Csa_015810 [Cucumis sativus]) HSP 1 Score: 508.1 bits (1307), Expect = 4.8e-140 Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of MELO3C023682 vs. NCBI nr
Match: XP_038896887.1 (psbP domain-containing protein 4, chloroplastic [Benincasa hispida]) HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132 Identity = 241/268 (89.93%), Postives = 247/268 (92.16%), Query Frame = 0
BLAST of MELO3C023682 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia]) HSP 1 Score: 431.4 bits (1108), Expect = 5.7e-117 Identity = 216/265 (81.51%), Postives = 230/265 (86.79%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2) HSP 1 Score: 356.3 bits (913), Expect = 3.0e-97 Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16 Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy TrEMBL
Match: A0A1S3CEV2 (psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500071 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 2.0e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 4.9e-151 Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140 Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.7e-117 Identity = 216/265 (81.51%), Postives = 230/265 (86.79%), Query Frame = 0
BLAST of MELO3C023682 vs. ExPASy TrEMBL
Match: A0A6J1IFH3 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473925 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.8e-114 Identity = 216/268 (80.60%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of MELO3C023682 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein ) HSP 1 Score: 356.3 bits (913), Expect = 2.2e-98 Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0
BLAST of MELO3C023682 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.9e-17 Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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