MELO3C023262.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C023262.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	UPF0235 protein C15orf40 homolog
Location	chr11: 700093 .. 701680 (-)
RNA-Seq Expression	MELO3C023262.jh1
Synteny	MELO3C023262.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACAGACTTATTATGACGGTTGACTCATTGAATGGGCTTAAATCTAAACAAAACTATGCCAGCGCTCGCAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGGTTTCTCTCTCTCTCTCTCTCTCTTCCATGCTATTTCTTTTCAGTTTATGAGATTTAAGTTGTATGTTTCTGGAAATCGTTGCAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTGAGTTAGCCATTCATTCTTTGCTGCTCATTTATTTTCATTGTCAATTTTACCACTTTCCCTAATTTTGAAATTGATTTCTTTTGTTATTTGGGATTTTTGGTGAAGGTCCTATTCTTAGTTTGTTGAAAATCCTGTGTTTGATCACCCATTTGCATTTGAGGGCCGTTATTGCTGTTGTTTTTTTCATGCGTAACAGAAACAACATTCTTCAATGATGAGATGAAGAGACTACTGCTGACTAAGTAAATTCAAAATATTAGAGAGCGGCGAGTGCACCGATAGTACCCACATAACACCCCTAAAAGTACAGCAATTAAATTAGAGTACTATATATCATGATGACATTGTTACATTGCATGAATGAAAGTATTCCAATTAAGACAAATATCTTGAACTGAATAATATGAAAATAGTTTGGAAAGACAGCAGCTAGAGGAAGCTTAAAACGGTCAAACCACTAAAGTGACTTGTCGGATGTGTAGCAATCTGTCATTCCCGTTGCTTCGTAGGATGTCTAGTGTTTTTGATCTTGGGTCGTTTGAAGCTTAACACATGTTCACAGTAGCTATAAGATTCCTCAAATTCAAAGCACTTCTTTAAGGATCAAACTCTAAATAGCTCTTATAATTAGAGCTCTCAGGTATGGTTTCTTCGTGTTGCCTTGAGCTCTTTTCTCGCTTATCCTCTTTCCTCATGAAGCTAATGAAGATCTCCTTTGCATGAATCATATGAATGCTGCTTCCTTAACTCTCCTTATGTTTGTTACAGGTTTTAGGTGTCAAAAGAAGACAAGTATCCATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGATTCTATGGGCTCTTTGGAAGTTCACACCCTTTAACAGAATATCAGCAATACTGTAATAAGTATATAGGTGGATTACCTTCTACCTTGCTGCCAGAACATTCAAAGTTATACAGCTAAATGTAACTCTTGTATGTTTTCATTTGTCTCAAACCTCAACAATAGTTTACGTGCTGTATATTTGTAGAGTTTCAACTTTATGGTAGTGAGCCAAAATATCTTAACTTGACTGCAAATGATTAATCTTGTT

mRNA sequence

ATAACAGACTTATTATGACGGTTGACTCATTGAATGGGCTTAAATCTAAACAAAACTATGCCAGCGCTCGCAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAAGTATCCATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGATTCTATGGGCTCTTTGGAAGTTCACACCCTTTAACAGAATATCAGCAATACTGTAATAAGTATATAGGTGGATTACCTTCTACCTTGCTGCCAGAACATTCAAAGTTATACAGCTAAATGTAACTCTTGTATGTTTTCATTTGTCTCAAACCTCAACAATAGTTTACGTGCTGTATATTTGTAGAGTTTCAACTTTATGGTAGTGAGCCAAAATATCTTAACTTGACTGCAAATGATTAATCTTGTT

Coding sequence (CDS)

ATGACGGTTGACTCATTGAATGGGCTTAAATCTAAACAAAACTATGCCAGCGCTCGCAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAAGTATCCATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGA

Protein sequence

MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE

Homology

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BLAST of MELO3C023262.jh1 vs. NCBI nr
Match: XP_008460904.1 (PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo])

HSP 1 Score: 294 bits (752), Expect = 5.59e-100
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60
           MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR
Sbjct: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60

Query: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120
           SVSPSSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR
Sbjct: 61  SVSPSSVAITIHAKPGSKIASITDFDDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120

Query: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156
           QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE
Sbjct: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156

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BLAST of MELO3C023262.jh1 vs. NCBI nr
Match: XP_004151587.1 (uncharacterized protein LOC101218498 [Cucumis sativus])

HSP 1 Score: 287 bits (734), Expect = 3.11e-97
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60
           MTV+ LNGLKSKQNY S RKIPFDLGKKMPPAKKGKTKAPKATESIQSSVK+NNYPSCLR
Sbjct: 1   MTVNPLNGLKSKQNYVSTRKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKSNNYPSCLR 60

Query: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120
           SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR
Sbjct: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120

Query: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156
           QVSIGSGSKSRGKVVIVE+VSLQSVFDALNKALTCE
Sbjct: 121 QVSIGSGSKSRGKVVIVEDVSLQSVFDALNKALTCE 156

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BLAST of MELO3C023262.jh1 vs. NCBI nr
Match: XP_038902101.1 (UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 235 bits (599), Expect = 4.60e-77
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MPPAKKGKTKA KATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAAKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALTCE 156
           LNKALTCE
Sbjct: 121 LNKALTCE 128

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BLAST of MELO3C023262.jh1 vs. NCBI nr
Match: XP_022971730.1 (UPF0235 protein C15orf40 homolog [Cucurbita maxima])

HSP 1 Score: 223 bits (567), Expect = 3.24e-72
Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 154
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of MELO3C023262.jh1 vs. NCBI nr
Match: XP_023512400.1 (UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219 bits (557), Expect = 1.08e-70
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKAPK TESI+S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIG GSKSR KVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGCGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 154
           LNKALT
Sbjct: 121 LNKALT 126

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BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot
Match: Q505I4 (UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 27  KKMPPAKKGK--TKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD 86
           KK     KGK  TK P+        V T+         S   V I IHAKPGSK  ++TD
Sbjct: 3   KKAGATSKGKNQTKEPETPPPPTGPVATD---------SKGFVTIAIHAKPGSKQNAVTD 62

Query: 87  FGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVV 136
              +A+GV I AP  +GEANA L  Y+S VL +++  V +  G KSR KVV
Sbjct: 63  LNTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

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BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot
Match: Q3ZBP8 (UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 67  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGS 126
           V+I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  V +  
Sbjct: 36  VSIAIHAKPGSKQNAVTDVTTEAVSVAIAAPPTEGEANAELCRYLSKVLELRKSDVVLDK 95

Query: 127 GSKSRGKVV-IVEEVSLQSVFDALNK 152
           G KSR KVV ++     + + + L K
Sbjct: 96  GGKSREKVVKLLASTPPEEILEKLKK 121

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BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot
Match: Q8WUR7 (UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 17  SARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSS-VAITIHAKP 76
           SAR +  ++ KK     KGK+++ +    +         P    +V P   V I IHAKP
Sbjct: 20  SARLLCAEMPKKAGATTKGKSQSKEPERPLP--------PLGPVAVDPKGCVTIAIHAKP 79

Query: 77  GSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVV 136
           GSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  V +  G KSR KVV
Sbjct: 80  GSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVV 139

Query: 137 -IVEEVSLQSVFDALNK 152
            ++   + + + + L K
Sbjct: 140 KLLASTTPEEILEKLKK 148

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot
Match: Q9CRC3 (UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 45/111 (40.54%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 27  KKMPPAKKGK--TKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD 86
           KK     KGK  TK P+        V T+             V I IHAKPGS+  ++TD
Sbjct: 3   KKAGATSKGKNQTKEPETAPPAAGPVATD---------PKGFVTIAIHAKPGSRQNAVTD 62

Query: 87  FGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVV 136
              +A+GV I AP  +GEANA L  Y+S VL +++  V +  G KSR KVV
Sbjct: 63  LSTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot
Match: Q54UW1 (UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 36/125 (28.80%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 33  KKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGV 92
           KKG + + K  +  Q  +  NN       V    + I ++  P SK +SI  F D  L +
Sbjct: 3   KKGSSNSSKQQQQQQQIIINNN-----AKVDEPIIKINVNVHPNSKESSIVSFEDQILSL 62

Query: 93  QIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIV----EEVSLQSVFDA 152
           +I  P  DG+AN  +++++S  L +++  + +G GSKSR K V +    E ++   +F+ 
Sbjct: 63  RISEPPIDGKANIGVIEFLSKELNIRKSNIEVGKGSKSRNKSVEIDISSENITKDELFER 122

Query: 153 LNKAL 154
           +   L
Sbjct: 123 IKSKL 122

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BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CDI8 (UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1)

HSP 1 Score: 294 bits (752), Expect = 2.71e-100
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60
           MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR
Sbjct: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60

Query: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120
           SVSPSSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR
Sbjct: 61  SVSPSSVAITIHAKPGSKIASITDFDDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120

Query: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156
           QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE
Sbjct: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LMY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1)

HSP 1 Score: 287 bits (734), Expect = 1.50e-97
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLR 60
           MTV+ LNGLKSKQNY S RKIPFDLGKKMPPAKKGKTKAPKATESIQSSVK+NNYPSCLR
Sbjct: 1   MTVNPLNGLKSKQNYVSTRKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKSNNYPSCLR 60

Query: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120
           SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR
Sbjct: 61  SVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRR 120

Query: 121 QVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE 156
           QVSIGSGSKSRGKVVIVE+VSLQSVFDALNKALTCE
Sbjct: 121 QVSIGSGSKSRGKVVIVEDVSLQSVFDALNKALTCE 156

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I6J5 (UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.57e-72
Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 154
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CR98 (uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013451 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 6.98e-71
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MPPAKKGKTKAPKATESIQS    N +PSCLRSV+PSSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAPKATESIQS----NKFPSCLRSVAPSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDY+S+VLGVKRRQVSIGSGSKSR KVVIVEEVSLQ+VFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYISTVLGVKRRQVSIGSGSKSRDKVVIVEEVSLQTVFDA 120

Query: 149 LNKALTCE 156
           LNKALTCE
Sbjct: 121 LNKALTCE 124

[Close]

BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EMK4 (uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC111434889 PE=3 SV=1)

HSP 1 Score: 216 bits (549), Expect = 8.69e-70
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 154
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of MELO3C023262.jh1 vs. TAIR 10
Match: AT1G49170.1 (Protein of unknown function (DUF167) )

HSP 1 Score: 157.5 bits (397), Expect = 8.6e-39
Identity = 87/124 (70.16%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M P KKGK K   A ES  +  +++++P+CLR ++PSSVAITIHAKPGSK ASITD  D+
Sbjct: 1   MAPTKKGK-KTKSAAES-TTVTESSSFPTCLRLLTPSSVAITIHAKPGSKAASITDVSDE 60

Query: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148
           A+GVQIDAPA+DGEANAALL+YMSSVLGVKRRQVS+GSGSKSR KVVIVE+++ QSVF A
Sbjct: 61  AVGVQIDAPARDGEANAALLEYMSSVLGVKRRQVSLGSGSKSRDKVVIVEDMTQQSVFQA 120

Query: 149 LNKA 153
           L++A
Sbjct: 121 LSQA 122

[Close]

BLAST of MELO3C023262.jh1 vs. TAIR 10
Match: AT5G63440.2 (Protein of unknown function (DUF167) )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 31/98 (31.63%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 56  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVL 115
           P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VL
Sbjct: 133 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 192

Query: 116 GVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL 154
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 193 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 230

[Close]

BLAST of MELO3C023262.jh1 vs. TAIR 10
Match: AT5G63440.3 (Protein of unknown function (DUF167) )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 31/98 (31.63%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 56  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVL 115
           P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VL
Sbjct: 114 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 173

Query: 116 GVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL 154
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 174 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 211

The following BLAST results are available for this feature:

BLAST of MELO3C023262.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460904.1	5.59e-100	99.36	PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]	[more]
XP_004151587.1	3.11e-97	96.15	uncharacterized protein LOC101218498 [Cucumis sativus]	[more]
XP_038902101.1	4.60e-77	97.66	UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]	[more]
XP_022971730.1	3.24e-72	94.44	UPF0235 protein C15orf40 homolog [Cucurbita maxima]	[more]
XP_023512400.1	1.08e-70	92.86	UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C023262.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q505I4	1.3e-10	42.34	UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]
Q3ZBP8	3.6e-10	43.02	UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1	[more]
Q8WUR7	4.8e-10	35.04	UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2	[more]
Q9CRC3	4.8e-10	40.54	UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1	[more]
Q54UW1	1.5e-08	28.80	UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1	[more]

BLAST of MELO3C023262.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDI8	2.71e-100	99.36	UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1	[more]
A0A0A0LMY2	1.50e-97	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1	[more]
A0A6J1I6J5	1.57e-72	94.44	UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=...	[more]
A0A6J1CR98	6.98e-71	91.41	uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1EMK4	8.69e-70	92.06	uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC1114348...	[more]

BLAST of MELO3C023262.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49170.1	8.6e-39	70.16	Protein of unknown function (DUF167)	[more]
AT5G63440.2	3.2e-09	31.63	Protein of unknown function (DUF167)	[more]
AT5G63440.3	3.2e-09	31.63	Protein of unknown function (DUF167)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003746	Protein of unknown function DUF167	SMART	SM01152	DUF167_2	coord: 63..139 e-value: 7.5E-26 score: 101.9
IPR003746	Protein of unknown function DUF167	PFAM	PF02594	DUF167	coord: 67..137 e-value: 2.6E-22 score: 78.7
IPR003746	Protein of unknown function DUF167	HAMAP	MF_00634	UPF0235	coord: 63..151 score: 14.951509
IPR036591	YggU-like superfamily	GENE3D	3.30.1200.10		coord: 58..153 e-value: 9.1E-24 score: 85.2
IPR036591	YggU-like superfamily	SUPERFAMILY	69786	YggU-like	coord: 57..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48
None	No IPR available	PANTHER	PTHR47817	OS04G0686300 PROTEIN	coord: 29..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023262.jh1.t1	MELO3C023262.jh1.t1	mRNA