MELO3C022627 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022627
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Stress response protein NST1-like
Location	chr10: 16633191 .. 16633610 (+)
RNA-Seq Expression	MELO3C022627
Synteny	MELO3C022627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCCTTTCCTTTCTCCCAAATTCCAAACTCCATAAAGCTCCCATCCTGACAAACATCTGTGTCGCAAACTTAGACTACGAGCATCTAAACCTGAATGTCCCTATCGCTAACTTATCAAAAAGAGAAGCAGAACAAAAGAAGGCAGCAGAGAATGCAGTGCTATTTAACCCTGACCTTCCATTAATCGTTTATGACCCACTTTTCCAAGACATACCTATGAGCAAAGATGCAGGCGAGATAAGTTCGGTGGAAGGAGCACAATCAGAAGATGAAGCCCTTGCGGAGAATGAAGGTGAGTTTCACGAATTACTCCACAATGTAATCGCAGAGCCCATGAACACAGTTTTTAAAGAAGTGCTTTTGGATAACGTATCAATGAAGGAACAGATCGCAAGTCTCAACACTAAAGTTTAA

mRNA sequence

ATGAAGATCCTTTCCTTTCTCCCAAATTCCAAACTCCATAAAGCTCCCATCCTGACAAACATCTGTGTCGCAAACTTAGACTACGAGCATCTAAACCTGAATGTCCCTATCGCTAACTTATCAAAAAGAGAAGCAGAACAAAAGAAGGCAGCAGAGAATGCAGTGCTATTTAACCCTGACCTTCCATTAATCGTTTATGACCCACTTTTCCAAGACATACCTATGAGCAAAGATGCAGGCGAGATAAGTTCGGTGGAAGGAGCACAATCAGAAGATGAAGCCCTTGCGGAGAATGAAGGTGAGTTTCACGAATTACTCCACAATGTAATCGCAGAGCCCATGAACACAGTTTTTAAAGAAGTGCTTTTGGATAACGTATCAATGAAGGAACAGATCGCAAGTCTCAACACTAAAGTTTAA

Coding sequence (CDS)

ATGAAGATCCTTTCCTTTCTCCCAAATTCCAAACTCCATAAAGCTCCCATCCTGACAAACATCTGTGTCGCAAACTTAGACTACGAGCATCTAAACCTGAATGTCCCTATCGCTAACTTATCAAAAAGAGAAGCAGAACAAAAGAAGGCAGCAGAGAATGCAGTGCTATTTAACCCTGACCTTCCATTAATCGTTTATGACCCACTTTTCCAAGACATACCTATGAGCAAAGATGCAGGCGAGATAAGTTCGGTGGAAGGAGCACAATCAGAAGATGAAGCCCTTGCGGAGAATGAAGGTGAGTTTCACGAATTACTCCACAATGTAATCGCAGAGCCCATGAACACAGTTTTTAAAGAAGTGCTTTTGGATAACGTATCAATGAAGGAACAGATCGCAAGTCTCAACACTAAAGTTTAA

Protein sequence

MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV

Homology

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BLAST of MELO3C022627 vs. NCBI nr
Match: TYK06139.1 (hypothetical protein E5676_scaffold572G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD 60
           MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD
Sbjct: 1   MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD 60

Query: 61  LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE 120
           LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE
Sbjct: 61  LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE 120

Query: 121 VLLDNVSMKEQIASLNTKV 140
           VLLDNVSMKEQIASLNTKV
Sbjct: 121 VLLDNVSMKEQIASLNTKV 139

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BLAST of MELO3C022627 vs. NCBI nr
Match: KAA0040567.1 (hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK05610.1 hypothetical protein E5676_scaffold98G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-28
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 20  NICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDA 79
           N+ + NLD EH++LNVP+ NLS+ EA  +KAAE   + +P+LPLIVYDP FQDIP+ +DA
Sbjct: 46  NLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDA 105

Query: 80  GEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 139
           G+ SS E AQS+DEA  E E EF ++L+NVI E MN  F EV L NV+ K+QI +LN +V
Sbjct: 106 GKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQV 165

[Close]

BLAST of MELO3C022627 vs. NCBI nr
Match: KAA0063168.1 (hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-20
Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 44  EAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFH 103
           + E KK  ++A   + DLPLIVYDPLFQDIP+ +DAGE+S V  AQ  D+AL + E EF 
Sbjct: 190 KVEPKKVTKDATSVDSDLPLIVYDPLFQDIPIDEDAGEMSLVGEAQLGDKALVKKEDEFS 249

Query: 104 ELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           ++L+ V  EPMN  FKEV+L+NV+MKEQIA+LNT+V
Sbjct: 250 KVLNKVTVEPMNAAFKEVILENVAMKEQIANLNTQV 285

[Close]

BLAST of MELO3C022627 vs. NCBI nr
Match: KAA0060804.1 (hypothetical protein E6C27_scaffold137G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 4.8e-19
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 52  ENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIA 111
           +N VLFN DL L+VYD L QDI +  D G+ SSV GAQSE+EA  +NE EF ELLH+VI 
Sbjct: 97  KNTVLFNLDLRLVVYDQLLQDIHVDLDTGKTSSVRGAQSENEAPTKNECEFCELLHHVII 156

Query: 112 EPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           E M+   KEVLL+N++MKEQIASLNTKV
Sbjct: 157 ESMDAALKEVLLENLAMKEQIASLNTKV 184

[Close]

BLAST of MELO3C022627 vs. NCBI nr
Match: TYK11975.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-18
Identity = 55/88 (62.50%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 52  ENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIA 111
           +N +LFN DL L+VYD L QDI +  D G+ SSV G QSE+EA  +NE EF ELLHNVI 
Sbjct: 354 KNTMLFNLDLRLVVYDQLLQDIHVDLDTGKTSSVRGEQSENEAPTKNECEFCELLHNVII 413

Query: 112 EPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           E M+   KEVLL+N++MKEQIASLNTK+
Sbjct: 414 ESMDAALKEVLLENLAMKEQIASLNTKL 441

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BLAST of MELO3C022627 vs. ExPASy TrEMBL
Match: A0A5D3C6Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00350 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.5e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD 60
           MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD
Sbjct: 1   MKILSFLPNSKLHKAPILTNICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPD 60

Query: 61  LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE 120
           LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE
Sbjct: 61  LPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKE 120

Query: 121 VLLDNVSMKEQIASLNTKV 140
           VLLDNVSMKEQIASLNTKV
Sbjct: 121 VLLDNVSMKEQIASLNTKV 139

[Close]

BLAST of MELO3C022627 vs. ExPASy TrEMBL
Match: A0A5D3C2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00660 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.7e-28
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 20  NICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDA 79
           N+ + NLD EH++LNVP+ NLS+ EA  +KAAE   + +P+LPLIVYDP FQDIP+ +DA
Sbjct: 46  NLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDA 105

Query: 80  GEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 139
           G+ SS E AQS+DEA  E E EF ++L+NVI E MN  F EV L NV+ K+QI +LN +V
Sbjct: 106 GKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQV 165

[Close]

BLAST of MELO3C022627 vs. ExPASy TrEMBL
Match: A0A5A7V6C0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00540 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 44  EAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFH 103
           + E KK  ++A   + DLPLIVYDPLFQDIP+ +DAGE+S V  AQ  D+AL + E EF 
Sbjct: 190 KVEPKKVTKDATSVDSDLPLIVYDPLFQDIPIDEDAGEMSLVGEAQLGDKALVKKEDEFS 249

Query: 104 ELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           ++L+ V  EPMN  FKEV+L+NV+MKEQIA+LNT+V
Sbjct: 250 KVLNKVTVEPMNAAFKEVILENVAMKEQIANLNTQV 285

[Close]

BLAST of MELO3C022627 vs. ExPASy TrEMBL
Match: A0A5A7V0F9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00260 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-19
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 52  ENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIA 111
           +N VLFN DL L+VYD L QDI +  D G+ SSV GAQSE+EA  +NE EF ELLH+VI 
Sbjct: 97  KNTVLFNLDLRLVVYDQLLQDIHVDLDTGKTSSVRGAQSENEAPTKNECEFCELLHHVII 156

Query: 112 EPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           E M+   KEVLL+N++MKEQIASLNTKV
Sbjct: 157 ESMDAALKEVLLENLAMKEQIASLNTKV 184

[Close]

BLAST of MELO3C022627 vs. ExPASy TrEMBL
Match: A0A5D3CKB6 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001600 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 55/88 (62.50%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 52  ENAVLFNPDLPLIVYDPLFQDIPMSKDAGEISSVEGAQSEDEALAENEGEFHELLHNVIA 111
           +N +LFN DL L+VYD L QDI +  D G+ SSV G QSE+EA  +NE EF ELLHNVI 
Sbjct: 354 KNTMLFNLDLRLVVYDQLLQDIHVDLDTGKTSSVRGEQSENEAPTKNECEFCELLHNVII 413

Query: 112 EPMNTVFKEVLLDNVSMKEQIASLNTKV 140
           E M+   KEVLL+N++MKEQIASLNTK+
Sbjct: 414 ESMDAALKEVLLENLAMKEQIASLNTKL 441

The following BLAST results are available for this feature:

BLAST of MELO3C022627 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06139.1	1.1e-68	100.00	hypothetical protein E5676_scaffold572G00350 [Cucumis melo var. makuwa]	[more]
KAA0040567.1	9.7e-28	56.67	hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK056...	[more]
KAA0063168.1	2.6e-20	58.33	hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]	[more]
KAA0060804.1	4.8e-19	64.77	hypothetical protein E6C27_scaffold137G00260 [Cucumis melo var. makuwa]	[more]
TYK11975.1	2.4e-18	62.50	Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw...	[more]

BLAST of MELO3C022627 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C022627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6Y4	5.5e-69	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C2N8	4.7e-28	56.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V6C0	1.2e-20	58.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V0F9	2.3e-19	64.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CKB6	1.2e-18	62.50	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak...	[more]

BLAST of MELO3C022627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022627.1	MELO3C022627.1	mRNA