MELO3C022626 (gene) Melon (DHL92) v4

Overview
NameMELO3C022626
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionStress response protein NST1-like
Locationchr10: 16632111 .. 16632278 (+)
RNA-Seq ExpressionMELO3C022626
SyntenyMELO3C022626
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

mRNA sequence

ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

Coding sequence (CDS)

ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

Protein sequence

MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG
Homology
BLAST of MELO3C022626 vs. NCBI nr
Match: KAA0040553.1 (hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK05596.1 hypothetical protein E5676_scaffold98G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 7.8e-13
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 56
           +  VRLDIV+MFY +KYHPDESYAI+EGEK+P   EEIN+ Y+LPNDP+ Y G
Sbjct: 59  ENSVRLDIVDMFYVVKYHPDESYAILEGEKVPLIVEEINDLYDLPNDPNVYPG 111

BLAST of MELO3C022626 vs. NCBI nr
Match: KAE8645907.1 (hypothetical protein Csa_023734, partial [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-12
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1  MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 56
          + +T++RLD+V+MFYA K+HP ESY +V+GEK+PF  E INE Y+ PNDP+AY G
Sbjct: 36 VSETQIRLDLVDMFYAAKFHPQESYVVVKGEKVPFIVESINELYDFPNDPNAYLG 90

BLAST of MELO3C022626 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 6.1e-10
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPD 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D
Sbjct: 263 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRD 311

BLAST of MELO3C022626 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 6.1e-10
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPD 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D
Sbjct: 294 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRD 342

BLAST of MELO3C022626 vs. NCBI nr
Match: KAA0056424.1 (hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 2  GKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 56
          G TKVRL +V+MFY  K+HP + YA+V+GE++ F  E INE Y  PN+ + Y G
Sbjct: 33 GDTKVRLYVVDMFYRTKFHPTDLYAMVDGERISFRAEVINELYGFPNEAELYIG 86

BLAST of MELO3C022626 vs. ExPASy TrEMBL
Match: A0A5D3C5D1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00460 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-13
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 56
           +  VRLDIV+MFY +KYHPDESYAI+EGEK+P   EEIN+ Y+LPNDP+ Y G
Sbjct: 59  ENSVRLDIVDMFYVVKYHPDESYAILEGEKVPLIVEEINDLYDLPNDPNVYPG 111

BLAST of MELO3C022626 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPD 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D
Sbjct: 294 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRD 342

BLAST of MELO3C022626 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPD 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D
Sbjct: 263 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRD 311

BLAST of MELO3C022626 vs. ExPASy TrEMBL
Match: A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-07
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 2  GKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 56
          G TKVRL +V+MFY  K+HP + YA+V+GE++ F  E INE Y  PN+ + Y G
Sbjct: 33 GDTKVRLYVVDMFYRTKFHPTDLYAMVDGERISFRAEVINELYGFPNEAELYIG 86

BLAST of MELO3C022626 vs. ExPASy TrEMBL
Match: A0A5A7ULS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00200 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYH 55
           +TK+RLD+ N F+A  YH  +SYA+V+GEK+PF  EEIN  Y L N+ + YH
Sbjct: 53  ETKIRLDVFNTFFATNYHLIDSYAMVKGEKVPFYAEEINTLYGLSNNLNEYH 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0040553.17.8e-1367.92hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK055... [more]
KAE8645907.15.0e-1260.00hypothetical protein Csa_023734, partial [Cucumis sativus][more]
TYK25768.16.1e-1069.39stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0038829.16.1e-1069.39stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0056424.12.9e-0751.85hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5D13.8e-1367.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TBU73.0e-1069.39Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DQE73.0e-1069.39Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UMK21.4e-0751.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7ULS02.4e-0753.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022626.1MELO3C022626.1mRNA