MELO3C022560 (gene) Melon (DHL92) v4

Overview
NameMELO3C022560
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionprotein MICRORCHIDIA 7
Locationchr10: 14733586 .. 14734264 (-)
RNA-Seq ExpressionMELO3C022560
SyntenyMELO3C022560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGGTGTGCATGTTATTGTATGTTATTTTATTTAGTGAGTTCTGCTAAAGAAAATGGGGAATGCTTTTATGTGATGAATTTATCAATTAAACTGCACCGTCTAGTCGTGGGTAAGATTTTGTAAAGAGATTTATATAATGCTTTAGTAGATGTAGATTGCATATTGTACATCTGTAGAGATTTTGAACTTGGAGAATAATAAACTGAGGGTTCTCCGTGTCCTCAAATAGAACAATGAGATTTATCTTAGTATAATAGGAGTTTCACGAATTGTAAAATATGTAACATTCTTGATATTTGTGATCCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGTGAGGCTACCTTCAATCTAGTCAGCTTCTTTTTTTTCCTGCTTATTTGCATTTCATGTACAATAAAATTGTGTGGTCTCTCTGACTCTGGGCAACTACAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

mRNA sequence

ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

Coding sequence (CDS)

ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

Protein sequence

MPSKMLHVYPFCRLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIKQRTREPNRFFFEERDRREIEDRNLRKKSFRKHLTLSKNCRTRSKF
Homology
[Close]
BLAST of MELO3C022560 vs. NCBI nr
Match: XP_008464402.1 (PREDICTED: protein MICRORCHIDIA 7 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DHEKLQDE ERRCKSL+ QLKAA +K  +  +E       F EERDRRE E+R
Sbjct: 736 RLKRKEADHEKLQDERERRCKSLESQLKAAELKIEELNKEQESLIDIFSEERDRRETEER 795

[Close]
BLAST of MELO3C022560 vs. NCBI nr
Match: XP_011650392.1 (protein MICRORCHIDIA 7 [Cucumis sativus] >KAE8652377.1 hypothetical protein Csa_013567 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DH KLQDE ERRCKSL+ QL AA +K  + ++E       F EERDRRE E+ 
Sbjct: 736 RLKRKEADHGKLQDERERRCKSLESQLTAAELKIEELSKEQESLIDIFSEERDRRETEEH 795

[Close]
BLAST of MELO3C022560 vs. NCBI nr
Match: XP_038879188.1 (protein MICRORCHIDIA 7 [Benincasa hispida])

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RL+RKE DHEKL+ E E RCKSL+ QLKAA +K  +  +E       F EERDRRE E+R
Sbjct: 737 RLQRKEADHEKLEHERE-RCKSLEAQLKAAELKIEELNKEQESLIDIFSEERDRRETEER 796

[Close]
BLAST of MELO3C022560 vs. ExPASy TrEMBL
Match: A0A1S3CLE0 (protein MICRORCHIDIA 7 OS=Cucumis melo OX=3656 GN=LOC103502300 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DHEKLQDE ERRCKSL+ QLKAA +K  +  +E       F EERDRRE E+R
Sbjct: 736 RLKRKEADHEKLQDERERRCKSLESQLKAAELKIEELNKEQESLIDIFSEERDRRETEER 795

[Close]
BLAST of MELO3C022560 vs. ExPASy TrEMBL
Match: A0A0A0LTZ4 (Morc6_S5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001330 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-07
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DH KLQDE ERRCKSL+ QL AA +K  + ++E       F EERDRRE E+ 
Sbjct: 442 RLKRKEADHGKLQDERERRCKSLESQLTAAELKIEELSKEQESLIDIFSEERDRRETEEH 501

The following BLAST results are available for this feature:
BLAST of MELO3C022560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464402.11.5e-0866.15PREDICTED: protein MICRORCHIDIA 7 [Cucumis melo][more]
XP_011650392.11.4e-0661.54protein MICRORCHIDIA 7 [Cucumis sativus] >KAE8652377.1 hypothetical protein Csa_... [more]
XP_038879188.14.4e-0560.00protein MICRORCHIDIA 7 [Benincasa hispida][more]
BLAST of MELO3C022560 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C022560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CLE07.0e-0966.15protein MICRORCHIDIA 7 OS=Cucumis melo OX=3656 GN=LOC103502300 PE=3 SV=1[more]
A0A0A0LTZ46.6e-0761.54Morc6_S5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001330 PE... [more]
BLAST of MELO3C022560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022560.1MELO3C022560.1mRNA