MELO3C022427 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022427
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Trigger_N domain-containing protein
Location	chr11: 31157068 .. 31160695 (-)
RNA-Seq Expression	MELO3C022427
Synteny	MELO3C022427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGAAAGAAGTTGGCAGCTGCAATTTGCATTGTCTCTCTCTCTCTCGTCGCTCTTATCCACTGTCACCCAAACTTAACCTCCGTTTCTTTCAAAACAGTGGTTTTCGCTTCTTCCTTTTTTTTAATGGTTTGTAACTATTTAAACTCCAACCGAAACGGCGTCGTATCACAACTCGGATAAGTCTCTATTCCGTGAGAACCGAAGAAAGACCGCCGACCCGCGCTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTTATCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTTGAATCTTTAAGCTCCACCGCATTTTGCCGCCTTCCGATAAGTTTTAGGATATTATCATTTTCAAATTCCTTTTTTATGCTTCAGGTTTCTGTTAAAGGCTATTGCCACAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACAAGATGGTTTGTGTAGGAGGTAAACATGTATTTTGGTTGGTTTCCGATTTCGATATTGATTCTTAATTTCTTGTTTTTTTTTTCTTGGGAATTGTAATTACATGTGTAGCTTAGAATTGTTCGTTACAATTCCAATTGTAATGACATATGAATTGAACATGAAAACTGATGGATAGAAGTGGGAACATCTTTTTCATTTCCAGGTCGTCATTTTCTTATAGCTCCCATAGAATTGGTTCCAGATTTTTGTCCAAACCGACGTCCATAGCTAGTTCAGGTAATTCTGCATACTTAGATTGTTATCATATTGATTGAAGCTTTTAGACTGAATTACCAATTTTCAACTATAAGAACGAAGTCATTTCATACTTTAAGTTCATCGACTGGGTCATTGGAAATTTTAATATATAGGAATCAAATTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTTATTTGACAGTATTTTTTAACCTTTATAACCATTCTTCTTTTCCCTTCCCCTTGTTGTTTGGGAGTCTCATTTATTTTTAATGTAGGTTGGAAAGAGAAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTATTGAATCCTATGCAGAGTATGATATTATTATCTTCTATAACATGTATTAGAAAATTGTGTAAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATCTATCCCAGTTTTGTCATTAGTTTTAAATCATTAACTATCACTTTTCAGTCAACTCTAGGTGTGCAAAAAAGACTCTTTTCTGGTCAGGTTATGTTAGTTTTGTTGATCTTCTGTCTTGATGTCATAGGTTTGGAGGCAGCCCTCACAGATTACAAAGGGAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATAATTACTAATTTTATTTTGGAAGGGTCCATGCCTCTCAAAGTGTGTTCGGTTATTGTAAATTTTCTTTTATATGGAAATCCAAAAGTGTTACCTCTTACTTCCATTCTCAATCTCAATCAAGATTGAGTTCCTATCATCATTCCCTTTCATATTTTCTTTGATATGCATTTAGTATTAGTGATCTATAAACAATGTCTCATGATGTCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGGTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGATTTTCATCCCCTTCCACCTTGAATGTTACAACCATCCATTCATCTGAGACTGACTTTCCTGTCCTTATGCATTCATATGTGTAGCTGCTTTTACAGTTATAAGTTCTTAATTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCTTCATGCACATTGATGCTTTGCCAGGGAAAACATCAAATGTAAGTTGCTGTTTCTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGTTTATATCTAACTCATCTAATACCTTGTCATCTTTGATAATTTTCCTAAGTTTGGTATTTTTATTTCTAGTGATTTAGTTCTAATGTTTTATTGTTAAGAAGTTTGAGTCATCAAGTTACAAATGGTATGAGGTGATTGGATAATGTGTTCATTAAACATTTTTTTTTATTTGGATAAATTTGGTTTCACACATGATTCATTTCTTCTCGGTATCCTTGTTCATTTTTTTTGGCATGTTATGCGAGATTTACATCCTAGTTACGCATAATATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCATCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTTTCTCATTCCCATTGCCCATGTGGTGATTGTTATTTAGAGATGTTTTTAAATTGGTCTTTCAAGATGGCTTATAGAATTCATGATATTTGGTTAAGTAAATTCACTATTTATGAACACATGAATTCAAAAAATTTAAAAATTGTTTCGAATTAACTTGGATGATTATCTATATATAGTTAAACTATACTCTTAAAATTTAAATTTTGATTTTACGTCGTTTCTTCATCATTAACTAAATCATATCCTGCACTATTAGAAAAATGTCTTGTTGATTTGGCAACCATAGCTATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGCCATGATTTATGGATTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCGTGTGTTCCCTTCTTTTGTTAAAGTTATCCATTTGCTTTTTTCCATCATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATTTGGTTAGAGCATCTGATATATTACTATTTAGTCAATAGTATTGATGTTAGATACAACATAGTATCCAACATCAATACTAACAATATCCATTCAAACTTTACATATGCAACCGAACCTTAAGTTCAAAAACATGGTTGACAATTAAACTTGTAATTTTATTCAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTCTTCTTTGGACTCCCAACACAGGAAAACATAAATGTGAAGGACAATAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTCAAGTGAAGATTTTGTCATTTCATTCTTCAATGGGCCTCCTGGTGTCAAAGCCTTGGAAATTTTACCTGAAACTGATGAAGCCTTATGCATAGTTGAATACCAATTCTAGTTGTTTGTTTCCTTGTAATTTATTTTGTTTAGAAAAAGTAAAATCATCTAATTTATTTTTTGTAAACGTGAAATGAATAATTTGGAGTTTGTTCTGATTAATCTATGTTTGATGCACTGTCTTCTTTAGTTT

mRNA sequence

AGAAAGAAAGAAGTTGGCAGCTGCAATTTGCATTGTCTCTCTCTCTCTCGTCGCTCTTATCCACTGTCACCCAAACTTAACCTCCGTTTCTTTCAAAACAGTGGTTTTCGCTTCTTCCTTTTTTTTAATGGTTTGTAACTATTTAAACTCCAACCGAAACGGCGTCGTATCACAACTCGGATAAGTCTCTATTCCGTGAGAACCGAAGAAAGACCGCCGACCCGCGCTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTTCTGTTAAAGGCTATTGCCACAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACAAGATGGTTTGTGTAGGAGGTCGTCATTTTCTTATAGCTCCCATAGAATTGGTTCCAGATTTTTGTCCAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCCTCACAGATTACAAAGGGAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGGTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAATAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTCAAGTGAAGATTTTGTCATTTCATTCTTCAATGGGCCTCCTGGTGTCAAAGCCTTGGAAATTTTACCTGAAACTGATGAAGCCTTATGCATAGTTGAATACCAATTCTAGTTGTTTGTTTCCTTGTAATTTATTTTGTTTAGAAAAAGTAAAATCATCTAATTTATTTTTTGTAAACGTGAAATGAATAATTTGGAGTTTGTTCTGATTAATCTATGTTTGATGCACTGTCTTCTTTAGTTT

Coding sequence (CDS)

ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTTCTGTTAAAGGCTATTGCCACAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACAAGATGGTTTGTGTAGGAGGTCGTCATTTTCTTATAGCTCCCATAGAATTGGTTCCAGATTTTTGTCCAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCCTCACAGATTACAAAGGGAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGGTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAATAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

Protein sequence

MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES

Homology

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BLAST of MELO3C022427 vs. ExPASy Swiss-Prot
Match: B1XL18 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 36/125 (28.80%), Postives = 67/125 (53.60%), Query Frame = 0


Query: 102 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 161
           KV+ E    +++ L +++  D TQK +D  +  LAR+   +PGFRK K      VPK  L
Sbjct: 2   KVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTV-NLPGFRKGK------VPKQIL 61

Query: 162 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFN 221
           ++ LG +R+   V++++++ ++     +ENI    N      + D+L   + PG+   F 
Sbjct: 62  IQRLGPNRIKASVLEDLIDDSLKAAIAQENIEALGN-FQLKSSFDDLISAYKPGEASSFK 118

Query: 222 AILEL 227
           A +++
Sbjct: 122 AAVDV 118

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BLAST of MELO3C022427 vs. ExPASy Swiss-Prot
Match: Q8YQX9 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=tig PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 102 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 161
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 162 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFN 221
           L+ LGK  +    ++E+L   +    K+E+I     +     + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESI-AAIGQPRLRSSFDDLINSYEPGQPLTFT 119

Query: 222 AILELE 228
           A +++E
Sbjct: 122 AAVDVE 119

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BLAST of MELO3C022427 vs. ExPASy Swiss-Prot
Match: Q3M725 (Trigger factor OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=tig PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 102 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 161
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 162 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFN 221
           L+ LGK  +    ++E+L   +    K+E+I     +     + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESI-AAIGQPRLRSSFDDLINSYEPGQPLTFT 119

Query: 222 AILELE 228
           A +++E
Sbjct: 122 AAVDVE 119

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BLAST of MELO3C022427 vs. ExPASy Swiss-Prot
Match: B2IT89 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 35/126 (27.78%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 102 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 161
           KV  E    ++I L +++T + T++ ++QV+ NLA +A  +PGFR+ K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITKQTYEQVIKNLASTA-NIPGFRRGK------VPRPIL 61

Query: 162 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFN 221
           L+ LG  R+    ++E++   +    K+E I     +     + ++L   + PGK     
Sbjct: 62  LQRLGTTRIKAAALEELIQDGIEQAVKQEAIPA-IGQPQLRSSFEDLINNYEPGKPLTIL 119

Query: 222 AILELE 228
           A +++E
Sbjct: 122 AAVDVE 119

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BLAST of MELO3C022427 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 7.9e-123
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS
Sbjct: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
           FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

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BLAST of MELO3C022427 vs. NCBI nr
Match: XP_011656737.1 (uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_004841 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.2e-116
Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           MMSATATATATVTNIA SEFPRPIFTKV VKGYCHNALVCLNFGGVEFDNV+DGLCRRSS
Sbjct: 1   MMSATATATATVTNIA-SEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
           FSYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

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BLAST of MELO3C022427 vs. NCBI nr
Match: XP_038906537.1 (uncharacterized protein LOC120092511 [Benincasa hispida])

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110
Identity = 216/234 (92.31%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           M+SATATATA  TNIA SEF  PIFT+V VKGYC N LVCLNFGGVEFDNVQDGLCRRSS
Sbjct: 1   MLSATATATA--TNIA-SEFRWPIFTQVPVKGYCRNPLVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
           FSYSSH++GSRFLSKPTSIASSGLEAA+TDYKGNAITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHKVGSRFLSKPTSIASSGLEAAITDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRV KFVIQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVIKFVIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STMADYAKKENINVKD KVNTTQTADELKVLF+PGKEFGFNAILELESASDAE+
Sbjct: 181 STMADYAKKENINVKDKKVNTTQTADELKVLFSPGKEFGFNAILELESASDAEN 231

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BLAST of MELO3C022427 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia])

HSP 1 Score: 367.9 bits (943), Expect = 6.7e-98
Identity = 189/228 (82.89%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 6   ATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSS 65
           A+ATATVTN+A SE+ R  F KV VKGYC + L C N GGVEFDNVQ+GLCRRSSFS S 
Sbjct: 2   ASATATVTNLA-SEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSP 61

Query: 66  HRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQ 125
           H++GSRFLS+PTSIASSGLEAA+TDYKGNAI LKNAK+VVESE+EN IQLRVDL+GDETQ
Sbjct: 62  HKLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQ 121

Query: 126 KVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMAD 185
           K+FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMAD
Sbjct: 122 KIFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMAD 181

Query: 186 YAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAE 234
           YAKKEN+NVKD KVNTTQTADELK+LF PGKEFGFNAILELESA+  +
Sbjct: 182 YAKKENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESANSED 228

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BLAST of MELO3C022427 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-97
Identity = 196/234 (83.76%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           M SATATATATV NIA SEF RP+FTKV V G   NAL+C+NFGGVEF+NVQD LC RSS
Sbjct: 1   MASATATATATVANIA-SEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
            SYS   +GSRFLS+PT+IASSGLEAA+TDYKG AITLKNAK+VVESE+ENKIQLRV+LT
Sbjct: 61  VSYSLLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STMADYAKKENI VKD  VNTTQT DELKVLF PGKEFGFNAILELE   + +S
Sbjct: 181 STMADYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDS 232

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BLAST of MELO3C022427 vs. ExPASy TrEMBL
Match: A0A1S3CBN2 (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.8e-123
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS
Sbjct: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
           FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]

BLAST of MELO3C022427 vs. ExPASy TrEMBL
Match: A0A0A0K988 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           MMSATATATATVTNIA SEFPRPIFTKV VKGYCHNALVCLNFGGVEFDNV+DGLCRRSS
Sbjct: 1   MMSATATATATVTNIA-SEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
           FSYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]

BLAST of MELO3C022427 vs. ExPASy TrEMBL
Match: A0A6J1DRL2 (uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022553 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.2e-98
Identity = 189/228 (82.89%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 6   ATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSS 65
           A+ATATVTN+A SE+ R  F KV VKGYC + L C N GGVEFDNVQ+GLCRRSSFS S 
Sbjct: 2   ASATATVTNLA-SEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSP 61

Query: 66  HRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQ 125
           H++GSRFLS+PTSIASSGLEAA+TDYKGNAI LKNAK+VVESE+EN IQLRVDL+GDETQ
Sbjct: 62  HKLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQ 121

Query: 126 KVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMAD 185
           K+FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMAD
Sbjct: 122 KIFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMAD 181

Query: 186 YAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAE 234
           YAKKEN+NVKD KVNTTQTADELK+LF PGKEFGFNAILELESA+  +
Sbjct: 182 YAKKENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESANSED 228

[Close]

BLAST of MELO3C022427 vs. ExPASy TrEMBL
Match: A0A6J1KVH6 (uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97
Identity = 196/234 (83.76%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60
           M SATATATATV NIA SEF RP+FTKV V G   NAL+C+NFGGVEF+NVQD LC RSS
Sbjct: 1   MASATATATATVANIA-SEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSS 60

Query: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120
            SYS   +GSRFLS+PT+IASSGLEAA+TDYKG AITLKNAK+VVESE+ENKIQLRV+LT
Sbjct: 61  VSYSLLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 235
           STMADYAKKENI VKD  VNTTQT DELKVLF PGKEFGFNAILELE   + +S
Sbjct: 181 STMADYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDS 232

[Close]

BLAST of MELO3C022427 vs. ExPASy TrEMBL
Match: A0A6J1H8V8 (uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC111461115 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.9e-94
Identity = 191/228 (83.77%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 6   ATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSS 65
           A+ATATV NIA SEF RP+FTKV V G   NALVCLNFGGVEF+NVQD LC RSS SYS 
Sbjct: 2   ASATATVANIA-SEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSP 61

Query: 66  HRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQ 125
             +GSRFLS+PT+IASSGLEAA+TDYKG AITLKNAK+VVESE+ENKIQLRVDLTGDETQ
Sbjct: 62  LVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTGDETQ 121

Query: 126 KVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMAD 185
           KVFDQVLTNLARSAP MPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM D
Sbjct: 122 KVFDQVLTNLARSAPLMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVD 181

Query: 186 YAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAE 234
           YAKKENI VKD  VNTTQT DELK LF PGKEFGFNAILELE   + E
Sbjct: 182 YAKKENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILELELELEPE 227

[Close]

BLAST of MELO3C022427 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 52/126 (41.27%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 105 VESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEV 164
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 165 LGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAIL 224
           LG  +V K VI++++NS + DY K+E++ V   ++   Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 225 ELESAS 231
           +L+ AS
Sbjct: 195 KLQEAS 199

[Close]

BLAST of MELO3C022427 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 52/126 (41.27%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 105 VESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEV 164
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 165 LGKDRVTKFVIQEILNSTMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAIL 224
           LG  +V K VI++++NS + DY K+E++ V   ++   Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 225 ELESAS 231
           +L+ AS
Sbjct: 195 KLQEAS 199

The following BLAST results are available for this feature:

BLAST of MELO3C022427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1XL18	6.7e-08	28.80	Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=320...	[more]
Q8YQX9	1.1e-07	30.95	Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690...	[more]
Q3M725	1.1e-07	30.95	Trigger factor OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292...	[more]
B2IT89	1.2e-04	27.78	Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN...	[more]

BLAST of MELO3C022427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460020.1	7.9e-123	100.00	PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]	[more]
XP_011656737.1	3.2e-116	95.30	uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical ...	[more]
XP_038906537.1	2.0e-110	92.31	uncharacterized protein LOC120092511 [Benincasa hispida]	[more]
XP_022155406.1	6.7e-98	82.89	uncharacterized protein LOC111022553 [Momordica charantia]	[more]
XP_023004174.1	4.3e-97	83.76	uncharacterized protein LOC111497577 [Cucurbita maxima]	[more]

BLAST of MELO3C022427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBN2	3.8e-123	100.00	uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=...	[more]
A0A0A0K988	1.6e-116	95.30	Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 P...	[more]
A0A6J1DRL2	3.2e-98	82.89	uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KVH6	2.1e-97	83.76	uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577...	[more]
A0A6J1H8V8	4.9e-94	83.77	uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of MELO3C022427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	1.1e-24	41.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	1.1e-24	41.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036611	Trigger factor ribosome-binding domain superfamily	GENE3D	3.30.70.1050		coord: 102..227 e-value: 2.6E-21 score: 77.9
IPR036611	Trigger factor ribosome-binding domain superfamily	SUPERFAMILY	102735	Trigger factor ribosome-binding domain	coord: 102..226
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 102..226 e-value: 4.0E-12 score: 46.6
None	No IPR available	PANTHER	PTHR30560:SF4	OS01G0894700 PROTEIN	coord: 55..232
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 55..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022427.1	MELO3C022427.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0015031	protein transport