MELO3C022177 (gene) Melon (DHL92) v4

Overview
NameMELO3C022177
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S9
Locationchr09: 498539 .. 500638 (-)
RNA-Seq ExpressionMELO3C022177
SyntenyMELO3C022177
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAACCCTAGCAAACCCTAGCCGCTCTTCATATACCTTTCTTCCCCCTTCTCCTCCACCCTTCTTCTTTCTCTGGCAGTGGAGATCATTCTGTTAGTGCAGCCGTAGCAGAGAAGAGATCATGGTGCACGTTTCCTTCTATAGGAATTGTATGTATAATTCCTTATCATGTCTTTCAATTATTTTCGTCATTCTCAAAATTTTCCAACTTCCGTTTCTCTGCTGCTTCTCTGATTGTGTTTACCGTACTTTTCTCATCGGTAGAGCTGGAAACTTTCGAATGGATTTGATTCCTTTTACATTAGTTTTATAACTCATTTTCAGTTGCTGATCTAAGTTTCACTTGTTGTAGAATCGGTGATATTGGAACATATTGTAGAATCATTGAGAATGTTCTAATTACATTTTCTCCTGTTGGATTTTTTGTACTGCATCATATGGAGTTTCTGTTCATGGAATAGTTAATTTTTTTTTTCTGAAAAACAATACTTTTTTTCTTGTTGCTTTTGCTGAGAGATATGCCGATTTAAGTGTGGGTTCTATCATTAAATAGATGGGAAGACGTTCAAGAAACCCCGACGTCCTTATGAGAAGGAGCGTCTGGATGCAGAGTTGAAATTGGTTGGAGAATATGGGCTTCGTTGTAAGAGGGAGTTATGGAGGGTTCAGTATGCTTTGAGCCGAATCCGAAACAATGCTCGGATGCTTTTAACACTCGATGAAAAGAATCCGCGTAGGATTTTTGAAGGAGAGGCTCTCCTTAGGAGGATGAACAGATATGGTCTCTTGGATGAGAGTCAGAACAAGCTCGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCCAAGTCTATCCACCATGCTAGAGTGCTCATCAGGCAGAAGCATATTAGGTATAATGGATTTCATTGCCTTTTCTACTAAGAGCATTCTTTTCCTTACATTAGCTATTTTGGTTTTCTTAATTATCATTTTATGAAATTCTCAGTGGTCTGTGATCAACTGTCAGCTGTTACAGACATCATATATGTGGTGCTGCTTTCAAAATAATTTCATTAATGTTTTTGATTATTTATCTTTATATTTGGTAGTAGTGTTTTTGGGTTGGATAAAATTCCATTTGTTGTTGCAAAAATTTCTGGCAAGGTAAGATATTTTTGACGAAATGGCTTGGGGGTTTTTGAATCTTTACTCATCTCATGATCTGAAAACAATATAATTGGATTTTCTGAAGAAAAGGGGAGCCACAAGGACTTAAAAGGTGTTTGTATTGCTTTTACCCCAAATGCTTGGTCTAGAAGCTTTTTTTTAATATAACTGCGGTGGGGATTTTACCTCCGACCTCCAGAGATGGTGGTCACGCCAATTTGAGCGCCTAGCTCACTTTGGCTGGTATAGAAGCACTTAAAAGTCTTTAGAAGCGTAAGACCAAAAGCCAATTGCTTTAACATTTCTTTTATTCTAGTTCTTATACTAAGATTTATTTTTATAAGACAAGGATCTTCAATGCATTTTTCTGCTATTGGTATATTTGTGTTATTCATGAAGTACTTTTTAATAATTTCATTTGTCACATTTCTCTCCTCTGTCTTTCTTAGGGTTGGAAGGCAGGTGGTGAACATTCCTTCTTTCATGGTGAGAGTAGACTCCCAGAAGCACATCGACTTCTCCCTCACAAGTCCATTCGGAGGTGGTCGTCCTGGAAGAGTGAAGAGAAAGAACCAGAAGGCTGCCGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAGGATGAAGATTGAGTTACTTAAACCTTATCTATCTATCACTATTTTATCAGAAAGAATGTTAAATCCTTCTTAGAAGTTTTGCTTTAAATATGTTTGAATTAGGGAACTCGCTTGCCTTTTTGTTATGGGGATTTTATTAACAACCTATTTGGTTTTTAGTTGCCACAGTTTTTCATGCTTTGATATTGGATTATTTTGAGAACTTTGTTCTTCTCTAATATTTCTACGCATTATGAATTATTTTCACTTCATTTGGTCTATGATATTATTTGCACAACTTGTTAGTA

mRNA sequence

AAAAAACCCTAGCAAACCCTAGCCGCTCTTCATATACCTTTCTTCCCCCTTCTCCTCCACCCTTCTTCTTTCTCTGGCAGTGGAGATCATTCTGTTAGTGCAGCCGTAGCAGAGAAGAGATCATGGTGCACGTTTCCTTCTATAGGAATTGTATGTATAATTCCTTATCATGTCTTTCAATTATTTTCGTCATTCTCAAAATTTTCCAACTTCCGTTTCTCTGCTGCTTCTCTGATTGTGTTTACCGTACTTTTCTCATCGGTAGAGCTGGAAACTTTCGAATGGATTTGATTCCTTTTACATTAGTTTTATAACTCATTTTCAGTTGCTGATCTAAGTTTCACTTGTTGTAGAATCGGTGATATTGGAACATATTGTAGAATCATTGAGAATGTTCTAATTACATTTTCTCCTGTTGGATTTTTTGTACTGCATCATATGGAGTTTCTGTTCATGGAATAGTTAATTTTTTTTTTCTGAAAAACAATACTTTTTTTCTTGTTGCTTTTGCTGAGAGATATGCCGATTTAAGTGTGGGTTCTATCATTAAATAGATGGGAAGACGTTCAAGAAACCCCGACGTCCTTATGAGAAGGAGCGTCTGGATGCAGAGTTGAAATTGGTTGGAGAATATGGGCTTCGTTGTAAGAGGGAGTTATGGAGGGTTCAGTATGCTTTGAGCCGAATCCGAAACAATGCTCGGATGCTTTTAACACTCGATGAAAAGAATCCGCGTAGGATTTTTGAAGGAGAGGCTCTCCTTAGGAGGATGAACAGATATGGTCTCTTGGATGAGAGTCAGAACAAGCTCGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCCAAGTCTATCCACCATGCTAGAGTGCTCATCAGGCAGAAGCATATTAGGGTTGGAAGGCAGGTGGTGAACATTCCTTCTTTCATGGTGAGAGTAGACTCCCAGAAGCACATCGACTTCTCCCTCACAAGTCCATTCGGAGGTGGTCGTCCTGGAAGAGTGAAGAGAAAGAACCAGAAGGCTGCCGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAGGATGAAGATTGAGTTACTTAAACCTTATCTATCTATCACTATTTTATCAGAAAGAATGTTAAATCCTTCTTAGAAGTTTTGCTTTAAATATGTTTGAATTAGGGAACTCGCTTGCCTTTTTGTTATGGGGATTTTATTAACAACCTATTTGGTTTTTAGTTGCCACAGTTTTTCATGCTTTGATATTGGATTATTTTGAGAACTTTGTTCTTCTCTAATATTTCTACGCATTATGAATTATTTTCACTTCATTTGGTCTATGATATTATTTGCACAACTTGTTAGTA

Coding sequence (CDS)

ATGCTTTTAACACTCGATGAAAAGAATCCGCGTAGGATTTTTGAAGGAGAGGCTCTCCTTAGGAGGATGAACAGATATGGTCTCTTGGATGAGAGTCAGAACAAGCTCGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTCGTGTTCAAGTCTGGTATGGCCAAGTCTATCCACCATGCTAGAGTGCTCATCAGGCAGAAGCATATTAGGGTTGGAAGGCAGGTGGTGAACATTCCTTCTTTCATGGTGAGAGTAGACTCCCAGAAGCACATCGACTTCTCCCTCACAAGTCCATTCGGAGGTGGTCGTCCTGGAAGAGTGAAGAGAAAGAACCAGAAGGCTGCCGCAAAGAAGGCTGCTGGAGGAGATGGAGATGAAGAGGATGAAGATTGA

Protein sequence

MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDGDEEDED
Homology
[Close]
BLAST of MELO3C022177 vs. NCBI nr
Match: KAG7025173.1 (40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 59  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 118

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 119 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 178

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 179 KAAAKKAAGGDGDEEDED 196

[Close]
BLAST of MELO3C022177 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. NCBI nr
Match: KAG7032207.1 (40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 121 KAAAKKAAGGDGDEEDED 138

[Close]
BLAST of MELO3C022177 vs. NCBI nr
Match: XP_022944955.1 (40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_022973398.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_023525066.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >XP_023541316.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >KAG6574094.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013152.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607518.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-65
Identity = 124/137 (90.51%), Postives = 136/137 (99.27%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 122 AAAKKAAGGDGDEEDED 139
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.2e-62
Identity = 120/138 (86.96%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 122 AAAKKAAGG---DGDEED 137
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.4e-51
Identity = 104/138 (75.36%), Postives = 123/138 (89.13%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+
Sbjct: 57  LLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGL 116

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHHARVLIRQ+HIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+RK   
Sbjct: 117 AKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK-- 176

Query: 122 AAAKKAAGGDGD-EEDED 139
             AK A GGDGD EEDE+
Sbjct: 177 --AKAAEGGDGDAEEDEE 190

[Close]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match: A6QLG5 (40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-49
Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+PRR+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+
Sbjct: 60  LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHHARVLIRQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179

Query: 122 AAAKKAAGGDGDEED 137
                A  GD +EED
Sbjct: 180 KGQGGAGAGDDEEED 194

[Close]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match: P46781 (40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-49
Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+PRR+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+
Sbjct: 60  LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHHARVLIRQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179

Query: 122 AAAKKAAGGDGDEED 137
                A  GD +EED
Sbjct: 180 KGQGGAGAGDDEEED 194

[Close]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match: A0A1S3CA34 (40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match: A0A6J1EC07 (40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match: A0A5D3BMY4 (40S ribosomal protein S9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00750 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 60
           MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG
Sbjct: 60  MLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSG 119

Query: 61  MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 120
           MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ
Sbjct: 120 MAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQ 179

Query: 121 KAAAKKAAGGDGDEEDED 139
           KAAAKKAAGGDGDEEDED
Sbjct: 180 KAAAKKAAGGDGDEEDED 197

[Close]
BLAST of MELO3C022177 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-66
Identity = 124/137 (90.51%), Postives = 136/137 (99.27%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 122 AAAKKAAGGDGDEEDED 139
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of MELO3C022177 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-63
Identity = 120/138 (86.96%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 62  AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 121
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 122 AAAKKAAGG---DGDEED 137
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of MELO3C022177 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 2   LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 61
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 62  AKSIHHARVLIRQKHIR 79
           AKSIHH+RVLIRQ+HIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

[Close]
BLAST of MELO3C022177 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.7e-04
Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 0 

Query: 5   LDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 64
           +D  +P RI   + LL ++   G++  ++  L     L+V +F  RRL T++     A+ 
Sbjct: 63  MDPADPFRIQMTDMLLEKLYNMGVI-PTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAEH 122

Query: 65  IHHARVLIRQKHIRVGRQVVNIPSFMV 92
              A   I Q H+RVG + +  P+F+V
Sbjct: 123 HKEAVTYIEQGHVRVGPETITDPAFLV 148

The following BLAST results are available for this feature:
BLAST of MELO3C022177 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7025173.11.2e-67100.0040S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_004135180.11.2e-67100.0040S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal prote... [more]
KAG7032207.11.2e-67100.0040S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022944955.12.8e-6799.2840S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal pr... [more]
XP_022142910.12.8e-6799.2840S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p... [more]
BLAST of MELO3C022177 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLF02.1e-6590.5140S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1[more]
Q9LXG16.2e-6286.9640S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1[more]
P528108.4e-5175.3640S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1[more]
A6QLG51.6e-4974.0740S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1[more]
P467811.6e-4974.0740S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3[more]
BLAST of MELO3C022177 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JAT46.0e-68100.0040S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3... [more]
A0A0A0KSN16.0e-68100.00S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604... [more]
A0A1S3CA346.0e-68100.0040S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1[more]
A0A6J1EC076.0e-68100.0040S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE... [more]
A0A5D3BMY46.0e-68100.0040S ribosomal protein S9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C022177 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39850.11.5e-6690.51Ribosomal protein S4 [more]
AT5G15200.14.4e-6386.96Ribosomal protein S4 [more]
AT5G15200.21.7e-3594.81Ribosomal protein S4 [more]
AT5G15750.12.7e-0429.89Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 50..121
e-value: 2.0E-5
score: 34.0
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 50..93
e-value: 1.7E-13
score: 50.0
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 50..94
e-value: 1.71301E-9
score: 49.1702
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 49..109
e-value: 8.4E-15
score: 56.8
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 3..107
e-value: 1.6E-41
score: 140.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..138
NoneNo IPR availablePANTHERPTHR11831:SF3140S RIBOSOMAL PROTEIN S9coord: 1..138
NoneNo IPR availablePROSITEPS50889S4coord: 50..121
score: 11.141525
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 3..101
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 1..138
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 48..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022177.1MELO3C022177.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome