MELO3C022142 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022142
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr09: 783802 .. 784113 (-)
RNA-Seq Expression	MELO3C022142
Synteny	MELO3C022142

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGTATACAACAGGTGATAAAAATAAGTGTGAAATACATTTTTTTATTGACAAATATACGGTGATTCCTCTCAATCCAAATACGCCAAAAGTAGGCTTCGATGATGAAGGTCCACATAATCGCATTCTCATTCTTAAACGGAAGGCCAATAACAAGCATATTCAGAAGGATGAGAGGGGCATTAGAGAAAACCATTTCATAGTTGAAGTAGGACAAAATTCTTATCCAACAAGATTAGGCAAAATCACAGGAACACCAAATGACAACGCCAGATCCATAGAGTCCTCCATCCAAATAGAACATTGA

mRNA sequence

ATGGTGATGTATACAACAGGTGATAAAAATAAGTGTGAAATACATTTTTTTATTGACAAATATACGGTGATTCCTCTCAATCCAAATACGCCAAAAGTAGGCTTCGATGATGAAGGTCCACATAATCGCATTCTCATTCTTAAACGGAAGGCCAATAACAAGCATATTCAGAAGGATGAGAGGGGCATTAGAGAAAACCATTTCATAGTTGAAGTAGGACAAAATTCTTATCCAACAAGATTAGGCAAAATCACAGGAACACCAAATGACAACGCCAGATCCATAGAGTCCTCCATCCAAATAGAACATTGA

Coding sequence (CDS)

ATGGTGATGTATACAACAGGTGATAAAAATAAGTGTGAAATACATTTTTTTATTGACAAATATACGGTGATTCCTCTCAATCCAAATACGCCAAAAGTAGGCTTCGATGATGAAGGTCCACATAATCGCATTCTCATTCTTAAACGGAAGGCCAATAACAAGCATATTCAGAAGGATGAGAGGGGCATTAGAGAAAACCATTTCATAGTTGAAGTAGGACAAAATTCTTATCCAACAAGATTAGGCAAAATCACAGGAACACCAAATGACAACGCCAGATCCATAGAGTCCTCCATCCAAATAGAACATTGA

Protein sequence

MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDERGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH

Homology

[Close]

BLAST of MELO3C022142 vs. NCBI nr
Match: AAU04757.1 (hypothetical protein [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 1.7e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE 60
           MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE
Sbjct: 1   MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE 60

Query: 61  RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH 104
           RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH
Sbjct: 61  RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH 103

[Close]

BLAST of MELO3C022142 vs. ExPASy TrEMBL
Match: Q5DMW6 (Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.2e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE 60
           MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE
Sbjct: 1   MVMYTTGDKNKCEIHFFIDKYTVIPLNPNTPKVGFDDEGPHNRILILKRKANNKHIQKDE 60

Query: 61  RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH 104
           RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH
Sbjct: 61  RGIRENHFIVEVGQNSYPTRLGKITGTPNDNARSIESSIQIEH 103

The following BLAST results are available for this feature:

BLAST of MELO3C022142 vs. NCBI nr


Match Name	E-value	Identity	Description
AAU04757.1	1.7e-53	100.00	hypothetical protein [Cucumis melo]	[more]

BLAST of MELO3C022142 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C022142 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q5DMW6	8.2e-54	100.00	Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1	[more]

BLAST of MELO3C022142 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022142.1	MELO3C022142.1	mRNA