MELO3C021932 (gene) Melon (DHL92) v4

Overview
NameMELO3C021932
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 4811966 .. 4812532 (-)
RNA-Seq ExpressionMELO3C021932
SyntenyMELO3C021932
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACAGACATAAATCCAGTTTTTTGAAGTTTACTCTTTAAGTGATCTTATTTATATTGAAAATCTCATGTTCCTCTATCTTCCATCATTGCAAAAATATTTTCCTCTACTTCTTACTCTAAATTCTTTTACTCGTCGCCATGTCGGGGCTTATAGACCTATGGACGTCCGAGCAGGCTAAACTCCGCGGCGAGGGTGGCTCCTCCCCCGCCGCTCCCACCGTTGATGGTCCAGTTCGAGTTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGAGTATGGGACCGAGTAAGACAACTCGGTATGAATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATCTTGGTTGAATATATGAGTCCATAGAGATCCAAAACATCTCATTGTACATATTTTTCACTTTTAATAAAACTTTCCTTTTTACTGTTCTTGAATTTGCCTTTTATTACTGGGATTCTCTTTTACAAATTTATTAAAACGTTTCTTACCGGATCATATTCCAAGTATTAATATATTAGTTGAACTATGTTCATTTTGATTTAAAATATTATTTTTTA

mRNA sequence

ACACAGACATAAATCCAGTTTTTTGAAGTTTACTCTTTAAGTGATCTTATTTATATTGAAAATCTCATGTTCCTCTATCTTCCATCATTGCAAAAATATTTTCCTCTACTTCTTACTCTAAATTCTTTTACTCGTCGCCATGTCGGGGCTTATAGACCTATGGACGTCCGAGCAGGCTAAACTCCGCGGCGAGGGTGGCTCCTCCCCCGCCGCTCCCACCGTTGATGGTCCAGTTCGAGTTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGAGTATGGGACCGAGTAAGACAACTCGGTATGAATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATCTTGGTTGAATATATGAGTCCATAGAGATCCAAAACATCTCATTGTACATATTTTTCACTTTTAATAAAACTTTCCTTTTTACTGTTCTTGAATTTGCCTTTTATTACTGGGATTCTCTTTTACAAATTTATTAAAACGTTTCTTACCGGATCATATTCCAAGTATTAATATATTAGTTGAACTATGTTCATTTTGATTTAAAATATTATTTTTTA

Coding sequence (CDS)

ATGTCGGGGCTTATAGACCTATGGACGTCCGAGCAGGCTAAACTCCGCGGCGAGGGTGGCTCCTCCCCCGCCGCTCCCACCGTTGATGGTCCAGTTCGAGTTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGAGTATGGGACCGAGTAAGACAACTCGGTATGAATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATCTTGGTTGAATATATGAGTCCATAG

Protein sequence

MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMNGKMCSEASVSILVEYMSP
Homology
[Close]
BLAST of MELO3C021932 vs. NCBI nr
Match: KAA0045984.1 (hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK13600.1 hypothetical protein E5676_scaffold299G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 6.4e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60
          MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60

Query: 61 GKMCSEASVSILVEYMSP 79
          GKMCSEASVSILVEYMSP
Sbjct: 61 GKMCSEASVSILVEYMSP 78

[Close]
BLAST of MELO3C021932 vs. NCBI nr
Match: KAE8651862.1 (hypothetical protein Csa_006004, partial [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 4.6e-27
Identity = 64/78 (82.05%), Postives = 69/78 (88.46%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60
          MSGL+DLWTSEQAKLR EGGSSPAAPT      VDVAE+GRWN TELTRVWDRVR+LGMN
Sbjct: 7  MSGLVDLWTSEQAKLRHEGGSSPAAPT------VDVAEQGRWNSTELTRVWDRVRRLGMN 66

Query: 61 GKMCSEASVSILVEYMSP 79
          GKMCSEASV +LVE+MSP
Sbjct: 67 GKMCSEASVCMLVEFMSP 78

[Close]
BLAST of MELO3C021932 vs. ExPASy TrEMBL
Match: A0A5D3CQ79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00970 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60
          MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60

Query: 61 GKMCSEASVSILVEYMSP 79
          GKMCSEASVSILVEYMSP
Sbjct: 61 GKMCSEASVSILVEYMSP 78

[Close]
BLAST of MELO3C021932 vs. ExPASy TrEMBL
Match: A0A0A0LIK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-27
Identity = 64/78 (82.05%), Postives = 69/78 (88.46%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60
          MSGL+DLWTSEQAKLR EGGSSPAAPT      VDVAE+GRWN TELTRVWDRVR+LGMN
Sbjct: 1  MSGLVDLWTSEQAKLRHEGGSSPAAPT------VDVAEQGRWNSTELTRVWDRVRRLGMN 60

Query: 61 GKMCSEASVSILVEYMSP 79
          GKMCSEASV +LVE+MSP
Sbjct: 61 GKMCSEASVCMLVEFMSP 72

The following BLAST results are available for this feature:
BLAST of MELO3C021932 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045984.16.4e-37100.00hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK136... [more]
KAE8651862.14.6e-2782.05hypothetical protein Csa_006004, partial [Cucumis sativus][more]
BLAST of MELO3C021932 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C021932 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQ793.1e-37100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LIK62.2e-2782.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1[more]
BLAST of MELO3C021932 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021932.1MELO3C021932.1mRNA