MELO3C021540.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C021540.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RNA exonuclease 4
Location	chr09: 3527954 .. 3531880 (-)
RNA-Seq Expression	MELO3C021540.jh1
Synteny	MELO3C021540.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCATCTTCTCACAGTCAATTATTGTTGCCTCCTAAATAACTATTCTTTTTATCAGAAGAAATGGATCATTCACTTGAGACATCGAGGTTTCTCTCTCTATCTATCTCTTTGCATGTATATATATACAGAAAGATTTAAGTTTCTTACTCCTAGCTTGGTTTATATATATATATATATATATGTTTTATGTTAGTTAAGCTATACTGACCGATTTTTAAAAAATGTTTGGTTTTTGTGGATGAAATAGGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGTAATGTCACTTCTTCTAATTCATAATTGGACTTAATTAAGAAATTCTTTTTGGAACATACCCACCTGAACCAAAATATTTACAAGATAATTTTGCTAAATATCACAACGATGGATCGTGATAAACCAATATAGACTATTAGATATGTCTATCTGTATCATGATAGATATATACGGTGGTCTATTGTCACAGATAGATTGTGATATTTTTTTTGTTCTATTAGAGAATATTTTTAGAAGTTTTGTCATTTAAAATAATTTTCCTCGAAATTAAGCCCAAAAGTTACGACATATGTTTGATCTCATAGTATGTTAAAAATAATTTCTAAGAGGATGAGTTATGATAGATTTATTCTTAGAATATTATCATTCCTGTCTGTGCACTTTGAGTTTCATCAATAATTTTTAAAGATAGCCACTTTATATTTAGTTTAGTAAAAAACTAGTCTCTCTAACTAGAATTTTCGTTATTATAAACTTTGGATAACTTTTTTCTCTATTAGTATAAGTCTCTCTACTGAAAATATTAGGGACTAAATGGAATGAAACCGAAAAATAAAAATATTCAAAATAATATTTCAATATAGTGTAAAAATTTGTAGATCAAGAATCAAAACAGGTGAAATAAACATTAATATTCGAGAAGAAAAACGATGTTATAGGAGTTCGAACACCAAACTTCATTCTCTAATATATCATGTTAAGAGCTTAAATTGATGGGTTAAGATTCTTACATTTTCATTATTGTGTTATTAGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTTAATTCTGTATGAATCCTAAAAAAACATGCATCAAAATATACTTTAAATTCTTGTTGATTTTAAAATCTTGATTTTTTTTTTTTTTTGCTGTTCTGGGATATCAGGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTCGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTAAGTAAAATTAAATTCATGTATATAAATTTGAAATTTAATATTATTACTCCTTTGCTTTTTTGGAATTTTGTCAAATTTTTTAGAAAAGTTAGGGACCAAATAAAAACCCGTTTGACTATTTTCAAACCTAAAAACCAACAATTTTGTAATTAATTTACTTTATAATATTTTAATACCGTAAAATGAAATAGATAGAACCATGTGATCGAACCGTTGTCAACACATGTATATACATATCATTAGAATTTAATTCATAGTTAAAATTTAGTTGTTATAATTTTATAAGAGCAAAGATCAGGTTTAATCTAGGTTAATTACTTTCGATCTCTTGCATCCTATTCAATATTTTTTGTCACTTAATATATATCTTGGGTGTTGTTTTAGGTTTCAAATATAAAACAAAAATTCGATCAACTTAGATTATAGTCAAGTTTTGTTTGGTTTCGTTTGATAATACTCTAATAAAACCCAAAACAATACCTAATTTTAAGTCGAATAATTTATCAAACCATATTGACTTAAATTCTAACTTTCACCGAACTAAATTTGCAATTTACCCTAATAATATAACCCATAAAATTTTATGAATATATTTGAAACTTTGTCATAACATTAACCTATATTAAATCTTCCATTTCTAATTTAAAAATTGAATTTTCTCAAAGCAAACACAAAATACAAAATTGAAATGATTGTTTTAACCTTTGATATGTTAAAATTAACATTAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGTAAATTGCTCGTAATAAAATTTAAATTTGTTGTAACCCATCAGCCTAAGTCGTTTTTAAGTTTCATATAGAAAATAACAAACATGGGTCCTCTAAGGATCTACTATATTTGCATATATATTACTTTTTTCTTGCATGAAAAAGAAATGGTCAAATTCAAACTTCTAACCTTTAAACTAAAAGTTTTTTTTCCTTCCTAATTTAAGCTATTAGTATTATTGGTGAAACCCTTTTCACATCTTATTGCATGTAGAAGTGAGCTCTAAACATTTAAGTTTTGTTGTTTGATTTAGTTTTCTGGTTTTTAATAATTTATGTTTGTTTTCTCTCTGTATTTCAAAACTAGTTGGTTTGATTTAACCTTTGAAAACATGAGTAGAAAGTGACTAATAACAAAAACACTTACCTGTAGAAGTAGCGTTATATAAGCTTTAACTATTTTTTAAAAGAAAAAAAAGTTATCAAACAACACCCTTGATTTCTTGATTTTATGCACCGACCCGCAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGGTAAGTTGACCCTTTAAACAAACTCTTTTTTTTTTTTTCTGAAAAGTCCTCCCTAAAATTTTACTTCAATTCTATTCATCTTTTTCATTTAAGGATTGAGATCCATGAAATAATACATAAATATATATCACTTGATGGGTCAAATTGGTGAAAGTAAGAAGTAAAAGGCAGATTTAGTACACTAGTACTAGAAAATTTTCCATATATATATTTTTATTTTTCGATAATATGTCGTTTTTCTCTATAGAAAATGATTAACTAAAAAGTGTGTTTTGTTAATTGTAGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGAGAGCTTCATATATTCTTCTCAACAATGGTGGAATTTAAATTTGGGTTGCCATAGCACAATTAAGTTCAAGTTCTTCATTGTCAAGCAAATATAGATTTATTTGGTGTGATGGGAATTTTTTGTTTGATTGTTTTCATTTTTATTAACCAATTTGGCATAATGTAAAAGTCAAGAAAAAAAGATGGAGACATGTGCACGTGTGTGAATCATTTCTCTTGTTGTGTGGTTAATTGGTGTACTGTGAACATGTGTGAGGATTGCATTTTTTTAATGGAAGGGTAATTACATAAA

mRNA sequence

CCAAATCATCTTCTCACAGTCAATTATTGTTGCCTCCTAAATAACTATTCTTTTTATCAGAAGAAATGGATCATTCACTTGAGACATCGAGGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTCGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGAGAGCTTCATATATTCTTCTCAACAATGGTGGAATTTAAATTTGGGTTGCCATAGCACAATTAAGTTCAAGTTCTTCATTGTCAAGCAAATATAGATTTATTTGGTGTGATGGGAATTTTTTGTTTGATTGTTTTCATTTTTATTAACCAATTTGGCATAATGTAAAAGTCAAGAAAAAAAGATGGAGACATGTGCACGTGTGTGAATCATTTCTCTTGTTGTGTGGTTAATTGGTGTACTGTGAACATGTGTGAGGATTGCATTTTTTTAATGGAAGGGTAATTACATAAA

Coding sequence (CDS)

ATGGATCATTCACTTGAGACATCGAGGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTCGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA

Protein sequence

MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRT

Homology

[Close]

BLAST of MELO3C021540.jh1 vs. NCBI nr
Match: XP_011656270.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 695 bits (1794), Expect = 1.48e-252
Identity = 331/343 (96.50%), Postives = 338/343 (98.54%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+NIFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGST+
Sbjct: 61  PLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTV 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           IDSGRTRGSGAIALACKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKP+  VTNYRYE
Sbjct: 121 IDSGRTRGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEHIRDAMP+KQVQKKIQEILYNGGEKARILVG CVEDDLKRLQIGYPS MIRDT
Sbjct: 181 TTGIRPEHIRDAMPVKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIGYPSFMIRDT 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKE+YP
Sbjct: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343

[Close]

BLAST of MELO3C021540.jh1 vs. NCBI nr
Match: XP_022993635.1 (RNA exonuclease 4-like [Cucurbita maxima])

HSP 1 Score: 651 bits (1680), Expect = 3.40e-235
Identity = 306/343 (89.21%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYE
Sbjct: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD 
Sbjct: 181 TTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]

BLAST of MELO3C021540.jh1 vs. NCBI nr
Match: XP_022938612.1 (RNA exonuclease 4-like [Cucurbita moschata])

HSP 1 Score: 650 bits (1678), Expect = 6.85e-235
Identity = 306/343 (89.21%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE
Sbjct: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
            TGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD 
Sbjct: 181 MTGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]

BLAST of MELO3C021540.jh1 vs. NCBI nr
Match: XP_023551468.1 (RNA exonuclease 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639 bits (1649), Expect = 1.73e-230
Identity = 301/343 (87.76%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQR+HQERCQFS VNSGLLAR A+LGIRDGST 
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRVHQERCQFSCVNSGLLARLASLGIRDGSTA 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE EN++FYSYVKPIIPVTNYRYE
Sbjct: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENIVFYSYVKPIIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD 
Sbjct: 181 TTGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QD Y+ C+  MRLYKRMRSQVHR E +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDLYD-CVGGMRLYKRMRSQVHRIEHHP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFA WRENEL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAAWRENELERMSPEQMLEISRSDYYCWCMDLR 341

[Close]

BLAST of MELO3C021540.jh1 vs. NCBI nr
Match: XP_022134351.1 (RNA exonuclease 4 isoform X1 [Momordica charantia])

HSP 1 Score: 635 bits (1639), Expect = 5.80e-229
Identity = 298/343 (86.88%), Postives = 320/343 (93.29%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDH LETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIG
Sbjct: 1   MDHPLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S +
Sbjct: 61  PLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIV 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           +D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+E
Sbjct: 121 VDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDT
Sbjct: 181 TTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDT 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E YP
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 301 MASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 341

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-22
Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 112 LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSY 171
           LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +V++    ++  Y
Sbjct: 220 LGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKY 279

Query: 172 VKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKR 231
           VKP  PVT+YR   +GIRPE+++    ++ VQK++ E+L     K RILVGH + +DLK 
Sbjct: 280 VKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML-----KGRILVGHALHNDLKV 339

Query: 232 LQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 291
           L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY
Sbjct: 340 LFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 399

Query: 292 KRMRSQ 293
             ++ +
Sbjct: 400 VMVKKE 400

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-22
Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 132 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 191
           +A+ C+ VG G DG   I A+V +V+     ++  YVKP   VT+YR   +GIRPE ++ 
Sbjct: 235 VAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPEDVKK 294

Query: 192 AMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSK 251
             P K VQK++ EIL     + R LVGH V +DLK L + +P   IRDT  Y P  +  K
Sbjct: 295 GEPFKVVQKEVSEIL-----RGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVK 354

Query: 252 LCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 287
               SLK L +  L   +Q G     ++   AMRLY
Sbjct: 355 SGRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLY 385

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot
Match: Q6CMT3 (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 125 RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTG 184
           RT G G  +++ C++VG G DG     A+V +V+   NV+   +V+P  PVT++R   +G
Sbjct: 112 RTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSG 171

Query: 185 IRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 244
           I+P H+ +A+  +  QK++  +L     K RILVGH V  DL  L + +P  MIRDT+ +
Sbjct: 172 IKPHHMANAVTQEDCQKQVSNVL-----KGRILVGHSVHHDLTALMLSHPRRMIRDTSRH 231

Query: 245 PPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMR---SQVHRKES 301
            P  +  S     SLK L +  L  D+Q+G     E+    M LYK  +    ++H K+ 
Sbjct: 232 MPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYKSDKLEFEKLHNKQF 288

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot
Match: Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 4.5e-21
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 131 AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIR 190
           A+AL C+ VG G  G   I A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++
Sbjct: 253 ALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 312

Query: 191 DAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSS 250
                + V+K++ E+L     K RILVGH + +DLK L + +P   IRDT  + P     
Sbjct: 313 QGEEFEVVKKEVAEML-----KGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRV 372

Query: 251 KLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ 293
           K    SLK L++  LG  +Q       ++   AMRLY  ++ +
Sbjct: 373 KSGRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKRE 410

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot
Match: O94375 (RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rex4 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 58/163 (35.58%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 132 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 191
           IA+ C+ VG   D  + + A+V +V+   +V++ +YV+P   VT++R   +G++  H+RD
Sbjct: 94  IAMDCEMVGVADD--MSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRD 153

Query: 192 AMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSK 251
           A   ++VQ ++ +IL N     R+LVGH V +DLK L + +P  MIRDT+ +    K +K
Sbjct: 154 APSFEKVQAEVAKILDN-----RVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRKLAK 213

Query: 252 -LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV 294
                LK LA+V LG D+Q+G     ++    M LYK+++ ++
Sbjct: 214 GRTPGLKKLAEVILGRDIQSGQHSSVQDAQATMELYKKVKKEM 249

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JZ30 (RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1)

HSP 1 Score: 651 bits (1680), Expect = 1.64e-235
Identity = 306/343 (89.21%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYE
Sbjct: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD 
Sbjct: 181 TTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FEK0 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 3.32e-235
Identity = 306/343 (89.21%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE
Sbjct: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
            TGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRLQIGYPS+MIRD 
Sbjct: 181 MTGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Sbjct: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLR 342

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BXL4 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 635 bits (1639), Expect = 2.81e-229
Identity = 298/343 (86.88%), Postives = 320/343 (93.29%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDH LETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIG
Sbjct: 1   MDHPLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S +
Sbjct: 61  PLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIV 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           +D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+E
Sbjct: 121 VDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDT 240
           TTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDT
Sbjct: 181 TTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDT 240

Query: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYP 300
           ANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E YP
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYP 300

Query: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
           MASDPQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 301 MASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 341

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BZE0 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 630 bits (1625), Expect = 4.27e-227
Identity = 298/346 (86.13%), Postives = 320/346 (92.49%), Query Frame = 0


Query: 1   MDHSLETSR---HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREH 60
           MDH LETSR   HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREH
Sbjct: 1   MDHPLETSRSVRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREH 60

Query: 61  LIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDG 120
           LIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD 
Sbjct: 61  LIGPLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDA 120

Query: 121 STIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNY 180
           S ++D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNY
Sbjct: 121 SIVVDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNY 180

Query: 181 RYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMI 240
           R+ETTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRLQIGYP  +I
Sbjct: 181 RFETTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--II 240

Query: 241 RDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKE 300
           RDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E
Sbjct: 241 RDTANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIE 300

Query: 301 SYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR 343
            YPMASDPQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Sbjct: 301 DYPMASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLR 344

[Close]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C947 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1)

HSP 1 Score: 603 bits (1554), Expect = 4.22e-216
Identity = 288/352 (81.82%), Postives = 318/352 (90.34%), Query Frame = 0


Query: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60
           MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120
           PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI
Sbjct: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120

Query: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180
           IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE
Sbjct: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180

Query: 181 TTGIRPEHIRDAMPMKQVQKKIQEILYNGGE----------KARILVGHCVEDDLKRLQI 240
            TG+RPEH+RDAMP+KQVQKKIQE L NG +          KARILVGH +++ L  LQI
Sbjct: 181 FTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQI 240

Query: 241 GYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRM 300
            YPS+MIRDTA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M
Sbjct: 241 DYPSIMIRDTAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLKM 300

Query: 301 RSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 341
           +SQVH++E YP+ASDP NK NFAIW++ EL++M+P+Q+L+ISRSDYYCWC+D
Sbjct: 301 KSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD 352

[Close]

BLAST of MELO3C021540.jh1 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 497.3 bits (1279), Expect = 1.0e-140
Identity = 230/347 (66.28%), Postives = 282/347 (81.27%), Query Frame = 0


Query: 4   SLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLP 63
           S ET R+KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC +CKKHCRS +SLREHLIGPLP
Sbjct: 9   SSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLP 68

Query: 64  KQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDS 123
           KQEC+NIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R A LG+RD   +ID 
Sbjct: 69  KQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLRD-KAMIDY 128

Query: 124 GRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTG 183
             +R    +AL+CK VGGGSDGSLD+CA+VC+ DE +NVIF++YVKP + VT+YRYETTG
Sbjct: 129 TSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTG 188

Query: 184 IRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGHCVEDDLKRLQIGYPS 243
           IRPE++RDAMP+KQVQ+KIQE L NG         G KARILVGH ++ DL RLQ+ YPS
Sbjct: 189 IRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPS 248

Query: 244 VMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVH 303
            MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H
Sbjct: 249 SMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKH 308

Query: 304 RKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 342
           + E+YP+A+D QN++N   WR++E +RMSP++ML ISRSDYYCWC+D
Sbjct: 309 KIEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLD 354

[Close]

BLAST of MELO3C021540.jh1 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 490.7 bits (1262), Expect = 9.4e-139
Identity = 228/346 (65.90%), Postives = 275/346 (79.48%), Query Frame = 0


Query: 5   LETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPK 64
           ++T R+KC  C+RQFNK EHLV+HMR S+HS HEPTC IC KHCRS DSLREHLIGPLPK
Sbjct: 1   MDTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPK 60

Query: 65  QECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSG 124
           QEC+NIF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R A LG+R+ ST ID  
Sbjct: 61  QECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNST-IDYT 120

Query: 125 RTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGI 184
            +R    +AL+CK VGGGSDGSLD+CA+VC+ DE ENV+F++YVKP IPVTNYRYE TGI
Sbjct: 121 SSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGI 180

Query: 185 RPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGHCVEDDLKRLQIGYPSV 244
           RPE++RDAM +K  Q+K+QE L NG           KARILVGH +++ L  LQ+ Y S 
Sbjct: 181 RPENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSS 240

Query: 245 MIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHR 304
           MIRDTA YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q HR
Sbjct: 241 MIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHR 300

Query: 305 KESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 342
            E+YP+ASD QN NNFA WR+NEL+RMSPE++L++SRSDYYCWC+D
Sbjct: 301 AEAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLD 345

[Close]

BLAST of MELO3C021540.jh1 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 298.5 bits (763), Expect = 6.8e-81
Identity = 143/338 (42.31%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT 128
           C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRP 188
           +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 248
           E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMAS 308
            PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 342
                N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C021540.jh1 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 298.5 bits (763), Expect = 6.8e-81
Identity = 143/338 (42.31%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT 128
           C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRP 188
           +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 248
           E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMAS 308
            PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 342
                N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C021540.jh1 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 298.5 bits (763), Expect = 6.8e-81
Identity = 143/338 (42.31%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT 128
           C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRP 188
           +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 248
           E ++D MP++ V++++   L    N G    +LVGH +  D+  L++ YPS ++RDTA Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMAS 308
            PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD 342
                N     ++++L++M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

The following BLAST results are available for this feature:

BLAST of MELO3C021540.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656270.1	1.48e-252	96.50	RNA exonuclease 4 [Cucumis sativus]	[more]
XP_022993635.1	3.40e-235	89.21	RNA exonuclease 4-like [Cucurbita maxima]	[more]
XP_022938612.1	6.85e-235	89.21	RNA exonuclease 4-like [Cucurbita moschata]	[more]
XP_023551468.1	1.73e-230	87.76	RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022134351.1	5.80e-229	86.88	RNA exonuclease 4 isoform X1 [Momordica charantia]	[more]

BLAST of MELO3C021540.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9GZR2	2.4e-22	34.95	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q91560	7.0e-22	39.74	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2	[more]
Q6CMT3	3.5e-21	35.16	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...	[more]
Q6PAQ4	4.5e-21	36.81	RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2	[more]
O94375	1.3e-20	35.58	RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848...	[more]

BLAST of MELO3C021540.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ30	1.64e-235	89.21	RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1	[more]
A0A6J1FEK0	3.32e-235	89.21	RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1	[more]
A0A6J1BXL4	2.81e-229	86.88	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A6J1BZE0	4.27e-227	86.13	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A1S3C947	4.22e-216	81.82	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1	[more]

BLAST of MELO3C021540.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27970.1	1.0e-140	66.28	Exonuclease family protein	[more]
AT5G40310.1	9.4e-139	65.90	Exonuclease family protein	[more]
AT2G48100.1	6.8e-81	42.31	Exonuclease family protein	[more]
AT2G48100.2	6.8e-81	42.31	Exonuclease family protein	[more]
AT2G48100.3	6.8e-81	42.31	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 130..295 e-value: 2.9E-16 score: 70.0
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 147..264 e-value: 1.5E-6 score: 28.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 128..309 e-value: 4.7E-36 score: 126.0
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 3..341
None	No IPR available	PANTHER	PTHR12801:SF122	OS02G0709000 PROTEIN	coord: 3..341
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 12..34
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 10..39 score: 11.530781
IPR037431	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	CDD	cd06144	REX4_like	coord: 132..287 e-value: 9.59237E-71 score: 215.458
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 145..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021540.jh1.t1	MELO3C021540.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding