MELO3C020632.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C020632.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RING-type E3 ubiquitin transferase
Location	chr12: 1805747 .. 1806100 (+)
RNA-Seq Expression	MELO3C020632.jh1
Synteny	MELO3C020632.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATGTGGCAGACGATTTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCACGCGTTCCATAAAGACTGCATTGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTTTTCTTCATCCTTTCCGACCCTCTTGAACTGA

mRNA sequence

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATGTGGCAGACGATTTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCACGCGTTCCATAAAGACTGCATTGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTTTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Coding sequence (CDS)

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATGTGGCAGACGATTTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCACGCGTTCCATAAAGACTGCATTGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTTTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Protein sequence

MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN

Homology

[Close]

BLAST of MELO3C020632.jh1 vs. NCBI nr
Match: KAA0067739.1 (RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 1.70e-79
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 39  MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN
Sbjct: 99  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. NCBI nr
Match: XP_008457568.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo] >TYJ98123.1 RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa])

HSP 1 Score: 226 bits (576), Expect = 2.12e-74
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAIL GRR AKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMK CGH FHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMA SSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]

BLAST of MELO3C020632.jh1 vs. NCBI nr
Match: KAA0067740.1 (RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (557), Expect = 5.86e-71
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M LL VL+LVIAILCG+R AKSDE+ELSKNLDIQAS+FHYG+DGDD+QECAICLCEIEEG
Sbjct: 39  MFLLLVLILVIAILCGKRSAKSDEKELSKNLDIQASIFHYGIDGDDKQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGH FHKDCIDRWFTVELHCPLCRT VCVVVDRSEN MA SSSFPTLLN
Sbjct: 99  EKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTLVCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. NCBI nr
Match: XP_008457567.1 (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo] >TYJ97405.1 RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (554), Expect = 1.68e-70
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M LL VL+LVIAILCG+R AKSDE+ELSKNL+IQA +FHYG+DGDDEQECAICLCEIEEG
Sbjct: 39  MFLLLVLILVIAILCGKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTS CVVVDRSEN MA SSSFPTLLN
Sbjct: 99  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. NCBI nr
Match: XP_008457566.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo] >TYJ97404.1 RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (528), Expect = 1.59e-66
Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEE 60
           M+LL VL+LVI ILCG+R AKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEE
Sbjct: 39  MLLLLVLILVITILCGKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEE 98

Query: 61  GEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           GEKCRK+KTCGH FHKDCIDRWFTVELHCPLCRTSVCVVVD SENAMA SSSFPTLLN
Sbjct: 99  GEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.5e-12
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 20  AKSDEEELSKNLDIQASVFHY---GVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKD 79
           A  D++ L  ++     +F Y     + D+E+EC ICL   E G+  RK++ CGH FH +
Sbjct: 105 ATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVE 164

Query: 80  CIDRWFTVELHCPLCRTSVCVVVDRSEN 105
           CID W +    CPLCR+ V   V   EN
Sbjct: 165 CIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-11
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 19  FAKSDEEEL------SKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHA 78
           FA+S E+ L      SK L     V     D  D  ECA+CL ++ +G+K R +  C H 
Sbjct: 83  FAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHG 142

Query: 79  FHKDCIDRWFTVELHCPLCRTSVCVVVD 101
           FH DCID WF     CPLCR +V  V D
Sbjct: 143 FHVDCIDMWFQSHSTCPLCRNTVGSVED 170

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-11
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 43  DGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCV 98
           + DD  ECA+CL E+E+GE+ R +  CGH FH +C+D W      CPLCR +V V
Sbjct: 127 EDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVV 181

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-11
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 45  DDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSV---CVVVDR 104
           ++++EC++CL E EE ++ R +  CGH+FH DCID WF     CPLCR  V     V++ 
Sbjct: 103 EEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIET 162

Query: 105 SENAMAFSSSFPT 115
             ++ +   +FPT
Sbjct: 163 GSSSSSSPLTFPT 175

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-11
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 45  DDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCV 98
           ++E+EC ICL   EEGEK + +  C H +H +C+DRW   E  CPLCR S+ V
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VRG5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00590 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 8.25e-80
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 39  MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN
Sbjct: 99  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BFU3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold54436G00010 PE=3 SV=1)

HSP 1 Score: 226 bits (576), Expect = 1.03e-74
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAIL GRR AKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMK CGH FHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMA SSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C5E4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497234 PE=3 SV=1)

HSP 1 Score: 226 bits (576), Expect = 1.03e-74
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAIL GRR AKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMK CGH FHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMA SSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VKL1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00600 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.84e-71
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M LL VL+LVIAILCG+R AKSDE+ELSKNLDIQAS+FHYG+DGDD+QECAICLCEIEEG
Sbjct: 39  MFLLLVLILVIAILCGKRSAKSDEKELSKNLDIQASIFHYGIDGDDKQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGH FHKDCIDRWFTVELHCPLCRT VCVVVDRSEN MA SSSFPTLLN
Sbjct: 99  EKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTLVCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BG26 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002250 PE=3 SV=1)

HSP 1 Score: 218 bits (554), Expect = 8.13e-71
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MVLLFVLLLVIAILCGRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M LL VL+LVIAILCG+R AKSDE+ELSKNL+IQA +FHYG+DGDDEQECAICLCEIEEG
Sbjct: 39  MFLLLVLILVIAILCGKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEG 98

Query: 61  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMAFSSSFPTLLN 117
           EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTS CVVVDRSEN MA SSSFPTLLN
Sbjct: 99  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C020632.jh1 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-13
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 20  AKSDEEELSKNLDIQASVFHY---GVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKD 79
           A  D++ L  ++     +F Y     + D+E+EC ICL   E G+  RK++ CGH FH +
Sbjct: 105 ATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVE 164

Query: 80  CIDRWFTVELHCPLCRTSVCVVVDRSEN 105
           CID W +    CPLCR+ V   V   EN
Sbjct: 165 CIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]

BLAST of MELO3C020632.jh1 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-12
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 19  FAKSDEEEL------SKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHA 78
           FA+S E+ L      SK L     V     D  D  ECA+CL ++ +G+K R +  C H 
Sbjct: 83  FAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHG 142

Query: 79  FHKDCIDRWFTVELHCPLCRTSVCVVVD 101
           FH DCID WF     CPLCR +V  V D
Sbjct: 143 FHVDCIDMWFQSHSTCPLCRNTVGSVED 170

[Close]

BLAST of MELO3C020632.jh1 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 45  DDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSV---CVVVDR 104
           ++++EC++CL E EE ++ R +  CGH+FH DCID WF     CPLCR  V     V++ 
Sbjct: 103 EEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIET 162

Query: 105 SENAMAFSSSFPT 115
             ++ +   +FPT
Sbjct: 163 GSSSSSSPLTFPT 175

[Close]

BLAST of MELO3C020632.jh1 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 6.7e-12
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 45  DDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSVCV 98
           ++E+EC ICL   EEGEK + +  C H +H +C+DRW   E  CPLCR S+ V
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of MELO3C020632.jh1 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 43  DGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRWFTVELHCPLCR 93
           DGD   ECAIC+ E  EGE+ R +  C HAFH  CID+W T    CP CR
Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155

The following BLAST results are available for this feature:

BLAST of MELO3C020632.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067739.1	1.70e-79	100.00	RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa]	[more]
XP_008457568.1	2.12e-74	95.73	PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo] >TYJ98123.1 RING-H2 ...	[more]
KAA0067740.1	5.86e-71	88.89	RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa]	[more]
XP_008457567.1	1.68e-70	88.89	PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo] >TYJ97405.1 RING-H2 ...	[more]
XP_008457566.1	1.59e-66	86.44	PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo] >TYJ97404.1 RING-H2 ...	[more]

BLAST of MELO3C020632.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	8.5e-12	38.64	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
P0C035	1.9e-11	42.05	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]
Q9LRB7	3.2e-11	49.09	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
O22255	5.5e-11	39.73	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9SRM0	9.4e-11	49.06	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]

BLAST of MELO3C020632.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VRG5	8.25e-80	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BFU3	1.03e-74	95.73	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C5E4	1.03e-74	95.73	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497234 PE=3 ...	[more]
A0A5A7VKL1	2.84e-71	88.89	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BG26	8.13e-71	88.89	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of MELO3C020632.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	6.0e-13	38.64	TOXICOS EN LEVADURA 63	[more]
AT1G53820.1	1.3e-12	42.05	RING/U-box superfamily protein	[more]
AT2G47560.1	3.9e-12	39.73	RING/U-box superfamily protein	[more]
AT3G11110.1	6.7e-12	49.06	RING/U-box superfamily protein	[more]
AT4G35480.1	1.1e-11	54.00	RING-H2 finger A3B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 50..91 e-value: 3.1E-5 score: 33.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 49..92 e-value: 1.4E-12 score: 47.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 50..92 score: 12.651561
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 27..98 e-value: 7.0E-19 score: 68.8
None	No IPR available	PANTHER	PTHR45676:SF98	RING-H2 FINGER PROTEIN ATL2	coord: 28..97
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 41..99
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 28..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020632.jh1.t1	MELO3C020632.jh1.t1	mRNA