MELO3C020492 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020492
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Wound-induced protein 1
Location	chr12: 234645 .. 235328 (-)
RNA-Seq Expression	MELO3C020492
Synteny	MELO3C020492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACATCCTTTTTAACTCCATCATTATTTCCCAACGAAACTTATTTTGAACTAATAACCACCCCTTCGGCAGCCGTTCGTCGCAATTACGAAACTGGCAAACCCGGAGTGGTCACCGGAGCAAAGGGAAAGCGTTGGGAGAGTGAGAGCCCTTTATGAGGCGTTGGGTACCAAAGACGTGGAGACTGTGCACCGCCTCCTGGCGCCGGATCTGGAGTGGTGGTTCCATGGTCCCCCCTCGCACCAGTACCTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAAAATTATTAATTAATAGTATAATACATATATACACACATATACATACATATATATGGTGTGTGTTTCTTCTGAACAAATAAATTTTCCTGCTTGTGTACTACCCACTTTTGGTTTGT

mRNA sequence

AACACATCCTTTTTAACTCCATCATTATTTCCCAACGAAACTTATTTTGAACTAATAACCACCCCTTCGGCAGCCGTTCGTCGCAATTACGAAACTGGCAAACCCGGAGTGGTCACCGGAGCAAAGGGAAAGCGTTGGGAGAGTGAGAGCCCTTTATGAGGCGTTGGGTACCAAAGACGTGGAGACTGTGCACCGCCTCCTGGCGCCGGATCTGGAGTGGTGGTTCCATGGTCCCCCCTCGCACCAGTACCTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAAAATTATTAATTAATAGTATAATACATATATACACACATATACATACATATATATGGTGTGTGTTTCTTCTGAACAAATAAATTTTCCTGCTTGTGTACTACCCACTTTTGGTTTGT

Coding sequence (CDS)

ATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAA

Protein sequence

MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL

Homology

[Close]

BLAST of MELO3C020492 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-19
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MRLLTG----ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEY 60
           MR+LTG    +SSSF F P+S+V  G T V+AEG     ++SW+HAWT+ +G+IT V+EY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGST-VIAEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 61  LNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRES---MPALVLAL 105
            NTS+TV R  +      S  I+PP +C S+W+S+    +   +P LVLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of MELO3C020492 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.3e-15
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MRLLTGA----SSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEY 60
           M++LTG     ++SF F   ++   G ++VL EG  P R+++WVHAWT+TDGVIT V+EY
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFG-SVVLVEGCDPTRSITWVHAWTVTDGVITQVREY 60

Query: 61  LNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWR---ESMPALVLAL 105
            NTS+TV RF  +    D  SI+   +C S+W+S +     +S+P LVLAL
Sbjct: 61  FNTSLTVTRFGKS----DISSIT-TLHCPSVWESSLPNRVGKSVPGLVLAL 105

[Close]

BLAST of MELO3C020492 vs. NCBI nr
Match: KAA0059984.1 (putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS 60
           MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS
Sbjct: 79  MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS 138

Query: 61  VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL 105
           VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL
Sbjct: 139 VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL 182

[Close]

BLAST of MELO3C020492 vs. NCBI nr
Match: XP_038893485.1 (senescence associated gene 20-like [Benincasa hispida])

HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40
Identity = 87/106 (82.08%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS 60
           MRLLTGASSSFVFAPIS+VP G T+VLAEG++ KRAVSWVHAWT+TDGVITHVKEYLNTS
Sbjct: 1   MRLLTGASSSFVFAPISVVPFGATVVLAEGYNTKRAVSWVHAWTVTDGVITHVKEYLNTS 60

Query: 61  VTVKRFSSAAT-DGDSPSISPPPNCESLWQSKVWRES-MPALVLAL 105
           VTVKRF+SA   DGDSPS SPPPNC+S+WQSKVW +S +PALVLAL
Sbjct: 61  VTVKRFASAVDGDGDSPSTSPPPNCQSVWQSKVWGKSVVPALVLAL 106

[Close]

BLAST of MELO3C020492 vs. NCBI nr
Match: KAG7037026.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.9 bits (372), Expect = 4.8e-32
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MRLLTG-ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNT 60
           MRLLTG +SSSFVFAPIS+V  GPT VLAEG+  KRAVSWVHAWTITDGVITHVKEYLNT
Sbjct: 67  MRLLTGVSSSSFVFAPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 126

Query: 61  SVTVKRFSSAATDGDSPSISPP---------PNCESLWQSKVWRESMPALVLAL 105
           SVTVKRF++AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Sbjct: 127 SVTVKRFATAA-DEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLAL 178

[Close]

BLAST of MELO3C020492 vs. NCBI nr
Match: KAG6607351.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 4.8e-32
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MRLLTG-ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNT 60
           MRLLTG +SSSFVFAPIS+V  GPT VLAEG+  KRAVSWVHAWTITDGVITHVKEYLNT
Sbjct: 83  MRLLTGVSSSSFVFAPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 142

Query: 61  SVTVKRFSSAATDGDSPSISPP---------PNCESLWQSKVWRESMPALVLAL 105
           SVTVKRF++AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Sbjct: 143 SVTVKRFATAA-DEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLAL 194

[Close]

BLAST of MELO3C020492 vs. NCBI nr
Match: XP_023523043.1 (senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524551.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524552.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.9 bits (372), Expect = 4.8e-32
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MRLLTG-ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNT 60
           MRLLTG +SSSFVFAPIS+V  GPT VLAEG+  KRAVSWVHAWTITDGVITHVKEYLNT
Sbjct: 1   MRLLTGVSSSSFVFAPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 60

Query: 61  SVTVKRFSSAATDGDSPSISPP---------PNCESLWQSKVWRESMPALVLAL 105
           SVTVKRF++AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Sbjct: 61  SVTVKRFATAA-DEESPSSSPPYAEADTLMTTNCQSVWQSKVCGESVPGLVLAL 112

[Close]

BLAST of MELO3C020492 vs. ExPASy TrEMBL
Match: A0A5A7UY51 (Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00340 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS 60
           MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS
Sbjct: 79  MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTS 138

Query: 61  VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL 105
           VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL
Sbjct: 139 VTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL 182

[Close]

BLAST of MELO3C020492 vs. ExPASy TrEMBL
Match: A0A6J1GBH5 (senescence associated gene 20-like OS=Cucurbita moschata OX=3662 GN=LOC111452657 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.8e-32
Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MRLLTG-ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNT 60
           MRLLTG +SSSFVF PIS+V  GPT VLAEG+  KRAVSWVHAWTITDGVITHVKEYLNT
Sbjct: 1   MRLLTGVSSSSFVFVPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 60

Query: 61  SVTVKRFSSAATDGDSPSISPP---------PNCESLWQSKVWRESMPALVLAL 105
           SVTVKRF++AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Sbjct: 61  SVTVKRFATAA-DEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLAL 112

[Close]

BLAST of MELO3C020492 vs. ExPASy TrEMBL
Match: A0A6J1KG22 (senescence associated gene 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492903 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.9e-32
Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MRLLTG-ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNT 60
           MRLLTG +SSSFVF PIS+V  GPT VLAEG++ KRAVSWVHAWTITDGVITHVKEYLNT
Sbjct: 1   MRLLTGVSSSSFVFTPISIVAFGPT-VLAEGYNTKRAVSWVHAWTITDGVITHVKEYLNT 60

Query: 61  SVTVKRFSSAATDGDSPSISPP---------PNCESLWQSKVWRESMPALVLAL 105
           SVTVKRF +AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Sbjct: 61  SVTVKRFVTAA-DEESPSSSPPYAEADTLMTTNCQSVWQSKVCGESVPGLVLAL 112

[Close]

BLAST of MELO3C020492 vs. ExPASy TrEMBL
Match: A0A6J1DQ36 (senescence associated gene 20 OS=Momordica charantia OX=3673 GN=LOC111022046 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-29
Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 1   MRLLTG--ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLN 60
           MRLLTG  +SSSFVF+P+S+V  GPT+VLAEG+  KRAVSWVHAWTITDGVITHVKEY N
Sbjct: 1   MRLLTGSSSSSSFVFSPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFN 60

Query: 61  TSVTVKRFSSAATDGDSPSISPPPNCESLWQSKV--WRESMPALVLAL 105
           TSVTVKRF++   D      SP  NC+S+WQSKV    +S+P LVLAL
Sbjct: 61  TSVTVKRFATVTDD------SPAANCQSVWQSKVCGGDDSVPGLVLAL 102

[Close]

BLAST of MELO3C020492 vs. ExPASy TrEMBL
Match: A0A6A1WK91 (Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR1G008920 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.2e-21
Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 1   MRLLTGASS---SFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYL 60
           M LLTG+SS   SFVF P S+V  G T VL EG+  +R+VSWVHAWT+TDG+IT V+EY 
Sbjct: 80  MHLLTGSSSPNNSFVFVPQSVVAFGST-VLVEGYDKERSVSWVHAWTVTDGIITQVREYF 139

Query: 61  NTSVTVKRFSSAATDGDSPSISPPP---NCESLWQSKVWRESMPALVLAL 105
           NTSVTV RF S        +  P P    C+S+WQS++  ES P LVLAL
Sbjct: 140 NTSVTVARFGSHPISSSDVASQPEPAIHKCQSVWQSQLSDESAPGLVLAL 188

[Close]

BLAST of MELO3C020492 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 )

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-20
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MRLLTG----ASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEY 60
           MR+LTG    +SSSF F P+S+V  G T V+AEG     ++SW+HAWT+ +G+IT V+EY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGST-VIAEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 61  LNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRES---MPALVLAL 105
            NTS+TV R  +      S  I+PP +C S+W+S+    +   +P LVLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of MELO3C020492 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0


Query: 1   MRLLTG---ASSSFVFAP--ISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKE 60
           MRLLTG      SF F P  + +V  G   V+AEG+   R V WVH W + DGV+T ++E
Sbjct: 59  MRLLTGEPPRQVSFRFEPSSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELRE 118

Query: 61  YLNTSVTVKRFSSAATDGDSPSISPPPNCESLWQS---KVWRESMPALVLAL 105
           Y NT +TV  +S  A   D         C ++W+S    + R S+P+L+LA+
Sbjct: 119 YFNTWLTVTDYSLGAVGWDM------GRC-TVWESVPRDLARGSLPSLLLAI 162

The following BLAST results are available for this feature:

BLAST of MELO3C020492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AK6	4.9e-19	45.05	Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1	[more]
P20144	3.3e-15	45.05	Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1	[more]

BLAST of MELO3C020492 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059984.1	2.1e-51	100.00	putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1...	[more]
XP_038893485.1	4.8e-40	82.08	senescence associated gene 20-like [Benincasa hispida]	[more]
KAG7037026.1	4.8e-32	72.81	Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6607351.1	4.8e-32	72.81	Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023523043.1	4.8e-32	72.81	senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524551.1 ...	[more]

BLAST of MELO3C020492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY51	1.0e-51	100.00	Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1GBH5	6.8e-32	71.93	senescence associated gene 20-like OS=Cucurbita moschata OX=3662 GN=LOC111452657...	[more]
A0A6J1KG22	8.9e-32	71.93	senescence associated gene 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492903 P...	[more]
A0A6J1DQ36	2.4e-29	67.59	senescence associated gene 20 OS=Momordica charantia OX=3673 GN=LOC111022046 PE=...	[more]
A0A6A1WK91	3.2e-21	55.45	Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR1G008920 PE=4 SV=1	[more]

BLAST of MELO3C020492 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10985.1	3.5e-20	45.05	senescence associated gene 20	[more]
AT5G01740.1	4.3e-10	39.29	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009798	Wound-induced protein Wun1-like	PFAM	PF07107	WI12	coord: 1..104 e-value: 3.8E-29 score: 101.0
IPR009798	Wound-induced protein Wun1-like	PANTHER	PTHR33703	OS07G0691300 PROTEIN	coord: 1..104
None	No IPR available	PANTHER	PTHR33703:SF19	WOUND-INDUCED PROTEIN, WUN1-RELATED	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020492.1	MELO3C020492.1	mRNA