MELO3C020319 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020319
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr06: 13446925 .. 13447592 (+)
RNA-Seq Expression	MELO3C020319
Synteny	MELO3C020319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCAAGAGGACGAGGAAGAGCTGCAAATAGATTAAGGACTACAATTAAGCCCATTATGGACCCAAAAGCTCATTCGATCAATCCAAATGTGAGGAGAGAACAAGAAGAGGTGTTATATGATAGAGTGACACAAAGGTTGATTGATGAATTATCAAGAGAAATTGAGATGAAATATGGAATTGAAAGATCAAAAGCATTAGGAACCATAAAATTTAGAAACGGTAGAGCCAGAGTAAGCAGAGAAGTGGATTAGGACGCTGGAAAAATGTTTTAGGGACATACGGTGTATAGAAGTAAGAAACATAGATTTGATTGTAAGGAGGAGGAGGATGATAGAAGTAAGAAATGTAGATTTGATTGTAACGAGGAGGAGGGGAAGGGGAAGAAGAAGAAGAAGGGGAAGGCGAAGAAGAAGAAGAAGGAGAAGGCGAAGGCGAAGGCGAAGGCGAAGAAGGAGAAGACGAAGAAGAAGGTGAAGAAGAAGAAGAAGAAGGCGAAGGCAAAGAAGAAGACGAAGAAGACAAAGAAGAAGAAGACGAAGAAGATGAGGAAGAAGAAGACGACGAGGAAGAAGAAAACAACGAAGAAGAAGAAGACAACAAAGACGATGAAGAAGAAGAAGACAACGAAGAAGTGTTATTTGTTACTTCTTCTTTCAAGTAG

mRNA sequence

ATGGCACCAAGAGGACGAGGAAGAGCTGCAAATAGATTAAGGACTACAATTAAGCCCATTATGGACCCAAAAGCTCATTCGATCAATCCAAATGTGAGGAGAGAACAAGAAGAGGTGTTATATGATAGAGTGACACAAAGGTTGATTGATGAATTATCAAGAGAAATTGAGATGAAATATGGAATTGAAAGATCAAAAGCATTAGGAACCATAAAATTTAGAAACGGTAGAGCCAGAGGACATACGGTGTATAGAAGTAAGAAACATAGATTTGATTGTAAGGAGGAGGAGGATGATAGAAGTAAGAAATGTAGATTTGATTGTAACGAGGAGGAGGGGAAGGGGAAGAAGAAGAAGAAGGGGAAGGCGAAGAAGAAGAAGAAGGAGAAGGCGAAGGCGAAGGCGAAGGCGAAGAAGGAGAAGACGAAGAAGAAGGTGAAGAAGAAGAAGAAGAAGGCGAAGGCAAAGAAGAAGACGAAGAAGACAAAGAAGAAGAAGACGAAGAAGATGAGGAAGAAGAAGACGACGAGGAAGAAGAAAACAACGAAGAAGAAGAAGACAACAAAGACGATGAAGAAGAAGAAGACAACGAAGAAGTGTTATTTGTTACTTCTTCTTTCAAGTAG

Coding sequence (CDS)

ATGGCACCAAGAGGACGAGGAAGAGCTGCAAATAGATTAAGGACTACAATTAAGCCCATTATGGACCCAAAAGCTCATTCGATCAATCCAAATGTGAGGAGAGAACAAGAAGAGGTGTTATATGATAGAGTGACACAAAGGTTGATTGATGAATTATCAAGAGAAATTGAGATGAAATATGGAATTGAAAGATCAAAAGCATTAGGAACCATAAAATTTAGAAACGGTAGAGCCAGAGGACATACGGTGTATAGAAGTAAGAAACATAGATTTGATTGTAAGGAGGAGGAGGATGATAGAAGTAAGAAATGTAGATTTGATTGTAACGAGGAGGAGGGGAAGGGGAAGAAGAAGAAGAAGGGGAAGGCGAAGAAGAAGAAGAAGGAGAAGGCGAAGGCGAAGGCGAAGGCGAAGAAGGAGAAGACGAAGAAGAAGGTGAAGAAGAAGAAGAAGAAGGCGAAGGCAAAGAAGAAGACGAAGAAGACAAAGAAGAAGAAGACGAAGAAGATGAGGAAGAAGAAGACGACGAGGAAGAAGAAAACAACGAAGAAGAAGAAGACAACAAAGACGATGAAGAAGAAGAAGACAACGAAGAAGTGTTATTTGTTACTTCTTCTTTCAAGT

Protein sequence

MAPRGRGRAANRLRTTIKPIMDPKAHSINPNVRREQEEVLYDRVTQRLIDELSREIEMKYGIERSKALGTIKFRNGRARGHTVYRSKKHRFDCKEEEDDRSKKCRFDCNEEEGKGKKKKKGKAKKKKKEKAKAKAKAKKEKTKKKVKKKKKKAKAKKKTKKTKKKKTKKMRKKKTTRKKKTTKKKKTTKTMKKKKTTKKCYLLLLLSS

Homology

The following BLAST results are available for this feature:

BLAST of MELO3C020319 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C020319 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C020319 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C020319 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..195
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 176..195 score: 26.67 coord: 119..133 score: 35.56 coord: 154..171 score: 40.74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020319.1	MELO3C020319.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding