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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ACGAAAAAAGAAATATCAAGAACTCACCCACGGTGATATGGGTCTCCTCATCGTGGGTCTCCGTCGCTATGGGTCTCCTTGTCGTGGGTCTTCGTCGCTAAGAAGAAAGATTGTGGAGCGGAGAAGAATGGGGTTAAGGATGGGGTTTTCGTCGTGCATCGTTTGTCGTTCGTGAGGCGAGAGATTTTGAAGAAGGAAAGGGGAGTGTGTGTGAAGAATGAAAGTGAGGGATTTTAAAGAAGGAAAGTAAGGGATTTT mRNA sequence ACGAAAAAAGAAATATCAAGAACTCACCCACGGTGATATGGGTCTCCTCATCGTGGGTCTCCGTCGCTATGGGTCTCCTTGTCGTGGGTCTTCGTCGCTAAGAAGAAAGATTGTGGAGCGGAGAAGAATGGGGTTAAGGATGGGGTTTTCGTCGTGCATCGTTTGTCGTTCGTGAGGCGAGAGATTTTGAAGAAGGAAAGGGGAGTGTGTGTGAAGAATGAAAGTGAGGGATTTTAAAGAAGGAAAGTAAGGGATTTT Coding sequence (CDS) ATGGGTCTCCTCATCGTGGGTCTCCGTCGCTATGGGTCTCCTTGTCGTGGGTCTTCGTCGCTAAGAAGAAAGATTGTGGAGCGGAGAAGAATGGGGTTAAGGATGGGGTTTTCGTCGTGCATCGTTTGTCGTTCGTGA Protein sequence MGLLIVGLRRYGSPCRGSSSLRRKIVERRRMGLRMGFSSCIVCRS
Homology
BLAST of MELO3C020214 vs. NCBI nr
Match: KAA0034002.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK02801.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 1 MGLLIVGLRRYGSPCRGSSSLRRKIVERRRMGLRMGFSSCIV 43
MG L VGL RYGSP GS S RRK +E RRMGLR+GFSSC+V
Sbjct: 1 MGYLAVGLHRYGSPRHGSPSSRRKDMEMRRMGLRLGFSSCVV 42
BLAST of MELO3C020214 vs. NCBI nr
Match: KAA0033316.1 (transcription factor bHLH36-like [Cucumis melo var. makuwa] >TYK21590.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]) HSP 1 Score: 52.8 bits (125), Expect = 9.2e-04 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 1 MGLLIVGLRRYGSPCRGSSSLRRKIVERRRMGLRMGFSSCIVCR 45
+GL +VGL RYGSP RRK +E RR+GLR+GFS C++CR
Sbjct: 67 IGLFVVGLHRYGSPLS-----RRKDIEMRRIGLRLGFSLCVICR 105
BLAST of MELO3C020214 vs. ExPASy TrEMBL
Match: A0A5D3BST2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1418G00060 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-06 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 1 MGLLIVGLRRYGSPCRGSSSLRRKIVERRRMGLRMGFSSCIV 43
MG L VGL RYGSP GS S RRK +E RRMGLR+GFSSC+V
Sbjct: 1 MGYLAVGLHRYGSPRHGSPSSRRKDMEMRRMGLRLGFSSCVV 42
BLAST of MELO3C020214 vs. ExPASy TrEMBL
Match: A0A5A7STJ5 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00940 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.4e-04 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 1 MGLLIVGLRRYGSPCRGSSSLRRKIVERRRMGLRMGFSSCIVCR 45
+GL +VGL RYGSP RRK +E RR+GLR+GFS C++CR
Sbjct: 67 IGLFVVGLHRYGSPLS-----RRKDIEMRRIGLRLGFSLCVICR 105
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0034002.1 | 3.4e-06 | 71.43 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK02801.1 CACTA en-... | [more] |
| KAA0033316.1 | 9.2e-04 | 56.82 | transcription factor bHLH36-like [Cucumis melo var. makuwa] >TYK21590.1 transcri... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BST2 | 1.6e-06 | 71.43 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7STJ5 | 4.4e-04 | 56.82 | Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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