Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGAAAACTTAGTTCTAAATATGTTGTGCTTAAAAAGAAATAGAATGTTTTAA
mRNA sequence
ATTATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGAAAACTTAGTTCTAAATATGTTGTGCTTAAAAAGAAATAGAATGTTTTAA
Coding sequence (CDS)
ATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGAAAACTTAGTTCTAAATATGTTGTGCTTAAAAAGAAATAGAATGTTTTAA
Protein sequence
MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKRNRMF
Homology
BLAST of MELO3C020194 vs. NCBI nr
Match:
KAA0032778.1 (zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYK23945.1 zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 301.6 bits (771), Expect = 4.2e-78
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 0
Query: 3 EQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK 62
E LE ESKKKKSIALK ISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK
Sbjct: 101 EHLEYESKKKKSIALKIISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK 160
Query: 63 ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED 122
ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED
Sbjct: 161 ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED 220
Query: 123 EHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKRNRMF 166
EHDDEVTLEPPSIDELFEMFESMQND+ENLVLNMLCLKRNRMF
Sbjct: 221 EHDDEVTLEPPSIDELFEMFESMQNDIENLVLNMLCLKRNRMF 263
BLAST of MELO3C020194 vs. NCBI nr
Match:
XP_031741720.1 (uncharacterized protein LOC116403915 [Cucumis sativus])
HSP 1 Score: 242.3 bits (617), Expect = 3.0e-60
Identity = 136/172 (79.07%), Postives = 144/172 (83.72%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
MKE LEDESKKKKSIALKTISLEVD EDED LD DDIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 217 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 276
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QKESKGEKSKKDEVICY CK+SGHIRT+ LL KATWDDSSESESEVEEM
Sbjct: 277 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKSKKKAMKATWDDSSESESEVEEM 336
Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLMAHS+K+DEHDD+VTLEP SIDELFE FESMQNDLE L + LK+
Sbjct: 337 ANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQNDLEKLSSKYVVLKK 388
BLAST of MELO3C020194 vs. NCBI nr
Match:
KAA0033952.1 (zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 225.3 bits (573), Expect = 3.8e-55
Identity = 129/172 (75.00%), Postives = 141/172 (81.98%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
MKE L+DESKKKKSIAL TISLE LEDEDDLD DDIAYFSRKY+NFIKRKKYFK+ LST
Sbjct: 7 MKEHLKDESKKKKSIALNTISLE--LEDEDDLDEDDIAYFSRKYRNFIKRKKYFKKHLST 66
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QKESKGEK+KKDEVI Y CKK+G+IRT+ L KATWDDSS+SESEVEEM
Sbjct: 67 QKESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDSSKSESEVEEM 126
Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLMAHS+KEDEHDDEVTLE PSIDELFE FESMQNDLE L ++ K+
Sbjct: 127 ANLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSKVVLKKK 176
BLAST of MELO3C020194 vs. NCBI nr
Match:
TYK02592.1 (zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 223.4 bits (568), Expect = 1.4e-54
Identity = 128/171 (74.85%), Postives = 140/171 (81.87%), Query Frame = 0
Query: 2 KEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQ 61
KE L+DESKKKKSIAL TISLE LEDEDDLD DDIAYFSRKY+NFIKRKKYFK+ LSTQ
Sbjct: 48 KEHLKDESKKKKSIALNTISLE--LEDEDDLDEDDIAYFSRKYRNFIKRKKYFKKHLSTQ 107
Query: 62 KESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEME 121
KESKGEK+KKDEVI Y CKK+G+IRT+ L KATWDDSS+SESEVEEM
Sbjct: 108 KESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDSSKSESEVEEMA 167
Query: 122 NLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLMAHS+KEDEHDDEVTLE PSIDELFE FESMQNDLE L ++ K+
Sbjct: 168 NLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSKVVLKKK 216
BLAST of MELO3C020194 vs. NCBI nr
Match:
KAA0046182.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYK00208.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 218.0 bits (554), Expect = 6.1e-53
Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
M+E LEDESKKKKSIAL TISLE LEDEDDLD DDI YFSRKYKNFIKRKK FK+ LST
Sbjct: 45 MEEHLEDESKKKKSIALNTISLE--LEDEDDLDEDDIVYFSRKYKNFIKRKKCFKKYLST 104
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QK SKGEKSKKDEVICY CKK HIRT+ L KATWDDSSESESEVEE
Sbjct: 105 QKVSKGEKSKKDEVICYECKKLAHIRTDCPFLKSSKKSKRKAMKATWDDSSESESEVEET 164
Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLM S+KEDEHDDEVTLEPPSI+ELFE FE++QNDLE L + LK+
Sbjct: 165 ANLGLMVQSDKEDEHDDEVTLEPPSIEELFENFENVQNDLEKLSSKYVVLKK 214
BLAST of MELO3C020194 vs. ExPASy TrEMBL
Match:
A0A5A7SQF9 (Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold428G00240 PE=4 SV=1)
HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 0
Query: 3 EQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK 62
E LE ESKKKKSIALK ISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK
Sbjct: 101 EHLEYESKKKKSIALKIISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQK 160
Query: 63 ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED 122
ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED
Sbjct: 161 ESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKED 220
Query: 123 EHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKRNRMF 166
EHDDEVTLEPPSIDELFEMFESMQND+ENLVLNMLCLKRNRMF
Sbjct: 221 EHDDEVTLEPPSIDELFEMFESMQNDIENLVLNMLCLKRNRMF 263
BLAST of MELO3C020194 vs. ExPASy TrEMBL
Match:
A0A5A7SRY3 (Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00110 PE=4 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 129/172 (75.00%), Postives = 141/172 (81.98%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
MKE L+DESKKKKSIAL TISLE LEDEDDLD DDIAYFSRKY+NFIKRKKYFK+ LST
Sbjct: 7 MKEHLKDESKKKKSIALNTISLE--LEDEDDLDEDDIAYFSRKYRNFIKRKKYFKKHLST 66
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QKESKGEK+KKDEVI Y CKK+G+IRT+ L KATWDDSS+SESEVEEM
Sbjct: 67 QKESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDSSKSESEVEEM 126
Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLMAHS+KEDEHDDEVTLE PSIDELFE FESMQNDLE L ++ K+
Sbjct: 127 ANLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSKVVLKKK 176
BLAST of MELO3C020194 vs. ExPASy TrEMBL
Match:
A0A5D3BUV2 (Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00460 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 7.0e-55
Identity = 128/171 (74.85%), Postives = 140/171 (81.87%), Query Frame = 0
Query: 2 KEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQ 61
KE L+DESKKKKSIAL TISLE LEDEDDLD DDIAYFSRKY+NFIKRKKYFK+ LSTQ
Sbjct: 48 KEHLKDESKKKKSIALNTISLE--LEDEDDLDEDDIAYFSRKYRNFIKRKKYFKKHLSTQ 107
Query: 62 KESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEME 121
KESKGEK+KKDEVI Y CKK+G+IRT+ L KATWDDSS+SESEVEEM
Sbjct: 108 KESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDSSKSESEVEEMA 167
Query: 122 NLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLMAHS+KEDEHDDEVTLE PSIDELFE FESMQNDLE L ++ K+
Sbjct: 168 NLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSKVVLKKK 216
BLAST of MELO3C020194 vs. ExPASy TrEMBL
Match:
A0A5A7TRZ7 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1333G00310 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53
Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
M+E LEDESKKKKSIAL TISLE LEDEDDLD DDI YFSRKYKNFIKRKK FK+ LST
Sbjct: 45 MEEHLEDESKKKKSIALNTISLE--LEDEDDLDEDDIVYFSRKYKNFIKRKKCFKKYLST 104
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QK SKGEKSKKDEVICY CKK HIRT+ L KATWDDSSESESEVEE
Sbjct: 105 QKVSKGEKSKKDEVICYECKKLAHIRTDCPFLKSSKKSKRKAMKATWDDSSESESEVEET 164
Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLENLVLNMLCLKR 162
NLGLM S+KEDEHDDEVTLEPPSI+ELFE FE++QNDLE L + LK+
Sbjct: 165 ANLGLMVQSDKEDEHDDEVTLEPPSIEELFENFENVQNDLEKLSSKYVVLKK 214
BLAST of MELO3C020194 vs. ExPASy TrEMBL
Match:
A0A5A7TZF4 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00480 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46
Identity = 111/142 (78.17%), Postives = 116/142 (81.69%), Query Frame = 0
Query: 1 MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLST 60
M E LEDESKKKKSIALKTISLEVD EDEDDLD DDI Y SRKYKNFIKRKKYFK+ LST
Sbjct: 28 MTEHLEDESKKKKSIALKTISLEVDPEDEDDLDQDDITYLSRKYKNFIKRKKYFKKHLST 87
Query: 61 QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
QKESKGEKSKKDEVICY CKKS HIRT+ LL KATWDDSSESESEVE+M
Sbjct: 88 QKESKGEKSKKDEVICYECKKSNHIRTDCPLLKSSKKSKKKAMKATWDDSSESESEVEKM 147
Query: 121 ENLGLMAHSNKEDEHDDEVTLE 132
LGLMAHS+KEDE DDEV L+
Sbjct: 148 TRLGLMAHSDKEDEQDDEVYLK 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0032778.1 | 4.2e-78 | 97.55 | zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
XP_031741720.1 | 3.0e-60 | 79.07 | uncharacterized protein LOC116403915 [Cucumis sativus] | [more] |
KAA0033952.1 | 3.8e-55 | 75.00 | zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
TYK02592.1 | 1.4e-54 | 74.85 | zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
KAA0046182.1 | 6.1e-53 | 73.26 | zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SQF9 | 2.0e-78 | 97.55 | Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
A0A5A7SRY3 | 1.8e-55 | 75.00 | Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
A0A5D3BUV2 | 7.0e-55 | 74.85 | Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
A0A5A7TRZ7 | 2.9e-53 | 73.26 | Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... | [more] |
A0A5A7TZF4 | 1.2e-46 | 78.17 | Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |