Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAATAAGAGAGCACGTGACCTCGTGCCATTGCATGGACTGCCACGTTCAACGTCCAAATGGTGGTTAATGGCGGTGCTTGTTTTTCTCTTGAAAAATTCCTATAATAATACAAACTCCAAACTCCCTCTCCCAAAATCTCTCCCTACATTTCTCAAAGAGAAAGGCGAAAAAACAAAAAGAACAAACACCTCACCACCAAACAAACACAATATGCAACTCTCAGCATCTCTCATAATTCCACCACCCCTCCTCCGCCCCTCCACCGCCTTCTTCCCTAAGCTCAGGTCAACTCCAGCCCTTTCCTCACCATGGCTCGGCCACCGAGCTGCGGAGGCGGTGGTAGAGCCAAGATGTGTTAGTCAGGGTGGATGGGGAACCTCTGTGGCGGAGGTGGACATAGAAGAGTGGCTGAAGCTAGGCAGGTTGGAGGAGAAGTGCGGCAGCGGAGGAAAGGGAATAGTGGAGCTACTTGAATGTTTGGAAAAAGAAGCCATTATGGGAGAAGATGAAGGGAGAGAGCCAACAGATTATAATAGAAGAGCTAAGATTTTTAGCACCAGTTCTGAAGTTTTCCAAGCTCTCAAGCAACATCCTGATGTTGTTGCTCCTCCTCCTCCTCCTCCGCCTCACCATTCTTGA
mRNA sequence
ATGATGAATAAGAGAGCACGTGACCTCGTGCCATTGCATGGACTGCCACGTTCAACGTCCAAATGGTGGTTAATGGCGGTGCTTGTTTTTCTCTTGAAAAATTCCTATAATAATACAAACTCCAAACTCCCTCTCCCAAAATCTCTCCCTACATTTCTCAAAGAGAAAGGCGAAAAAACAAAAAGAACAAACACCTCACCACCAAACAAACACAATATGCAACTCTCAGCATCTCTCATAATTCCACCACCCCTCCTCCGCCCCTCCACCGCCTTCTTCCCTAAGCTCAGGTCAACTCCAGCCCTTTCCTCACCATGGCTCGGCCACCGAGCTGCGGAGGCGGTGGTAGAGCCAAGATGTGTTAGTCAGGGTGGATGGGGAACCTCTGTGGCGGAGGTGGACATAGAAGAGTGGCTGAAGCTAGGCAGGTTGGAGGAGAAGTGCGGCAGCGGAGGAAAGGGAATAGTGGAGCTACTTGAATGTTTGGAAAAAGAAGCCATTATGGGAGAAGATGAAGGGAGAGAGCCAACAGATTATAATAGAAGAGCTAAGATTTTTAGCACCAGTTCTGAAGTTTTCCAAGCTCTCAAGCAACATCCTGATGTTGTTGCTCCTCCTCCTCCTCCTCCGCCTCACCATTCTTGA
Coding sequence (CDS)
ATGATGAATAAGAGAGCACGTGACCTCGTGCCATTGCATGGACTGCCACGTTCAACGTCCAAATGGTGGTTAATGGCGGTGCTTGTTTTTCTCTTGAAAAATTCCTATAATAATACAAACTCCAAACTCCCTCTCCCAAAATCTCTCCCTACATTTCTCAAAGAGAAAGGCGAAAAAACAAAAAGAACAAACACCTCACCACCAAACAAACACAATATGCAACTCTCAGCATCTCTCATAATTCCACCACCCCTCCTCCGCCCCTCCACCGCCTTCTTCCCTAAGCTCAGGTCAACTCCAGCCCTTTCCTCACCATGGCTCGGCCACCGAGCTGCGGAGGCGGTGGTAGAGCCAAGATGTGTTAGTCAGGGTGGATGGGGAACCTCTGTGGCGGAGGTGGACATAGAAGAGTGGCTGAAGCTAGGCAGGTTGGAGGAGAAGTGCGGCAGCGGAGGAAAGGGAATAGTGGAGCTACTTGAATGTTTGGAAAAAGAAGCCATTATGGGAGAAGATGAAGGGAGAGAGCCAACAGATTATAATAGAAGAGCTAAGATTTTTAGCACCAGTTCTGAAGTTTTCCAAGCTCTCAAGCAACATCCTGATGTTGTTGCTCCTCCTCCTCCTCCTCCGCCTCACCATTCTTGA
Protein sequence
MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKTKRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS
Homology
BLAST of MELO3C020169 vs. NCBI nr
Match:
XP_008456969.1 (PREDICTED: uncharacterized protein LOC103496760 [Cucumis melo])
HSP 1 Score: 435.3 bits (1118), Expect = 3.1e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT 60
MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT
Sbjct: 1 MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT 60
Query: 61 KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC 120
KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC
Sbjct: 61 KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC 120
Query: 121 VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN 180
VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN
Sbjct: 121 VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN 180
Query: 181 RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS 215
RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS
Sbjct: 181 RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS 214
BLAST of MELO3C020169 vs. NCBI nr
Match:
KAA0067024.1 (uncharacterized protein E6C27_scaffold38G00600 [Cucumis melo var. makuwa] >TYK26260.1 uncharacterized protein E5676_scaffold14G00240 [Cucumis melo var. makuwa])
HSP 1 Score: 289.3 bits (739), Expect = 2.8e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 73 MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE 132
MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE
Sbjct: 1 MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE 60
Query: 133 VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV 192
VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV
Sbjct: 61 VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV 120
Query: 193 FQALKQHPDVVAPPPPPPPHHS 215
FQALKQHPDVVAPPPPPPPHHS
Sbjct: 121 FQALKQHPDVVAPPPPPPPHHS 142
BLAST of MELO3C020169 vs. NCBI nr
Match:
XP_011655051.1 (uncharacterized protein LOC105435471 [Cucumis sativus] >KGN50752.1 hypothetical protein Csa_005822 [Cucumis sativus])
HSP 1 Score: 239.2 bits (609), Expect = 3.3e-59
Identity = 125/147 (85.03%), Postives = 128/147 (87.07%), Query Frame = 0
Query: 73 MQLSASLIIPPP---LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTS 132
MQLSASLI PPP L RPSTAFFP LR TP+LSSPWL HR AEA EPRCVSQGGWG+S
Sbjct: 1 MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSS 60
Query: 133 --VAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFS 192
V EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAIMGEDEGR+PTDYNRRAKIFS
Sbjct: 61 VGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIFS 120
Query: 193 TSSEVFQALKQHPDVVAPPPPPPPHHS 215
TSSEVFQALKQH D VA PPP PPHHS
Sbjct: 121 TSSEVFQALKQHSDAVA-PPPSPPHHS 146
BLAST of MELO3C020169 vs. NCBI nr
Match:
XP_038892559.1 (uncharacterized protein LOC120081603 [Benincasa hispida])
HSP 1 Score: 235.3 bits (599), Expect = 4.8e-58
Identity = 117/146 (80.14%), Postives = 125/146 (85.62%), Query Frame = 0
Query: 73 MQLSASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGT 132
MQ+SASLIIPPP RPSTA FPK R TP +SSPWL HRA VEPRCVSQGGWG
Sbjct: 1 MQVSASLIIPPPPPPSFHRPSTAVFPKFRPTPPISSPWLRHRA--GAVEPRCVSQGGWGG 60
Query: 133 SVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFST 192
SVAE+DIEEWLK G+LEEKCG GGKG+VELLECLEKEAIMGEDEG++PTDYNRRAKIFST
Sbjct: 61 SVAELDIEEWLKSGKLEEKCGGGGKGVVELLECLEKEAIMGEDEGKDPTDYNRRAKIFST 120
Query: 193 SSEVFQALKQHPDVVAPPPPPPPHHS 215
SS+VFQALKQH D APPPPPPPHHS
Sbjct: 121 SSKVFQALKQHSDAAAPPPPPPPHHS 144
BLAST of MELO3C020169 vs. NCBI nr
Match:
XP_023547061.1 (uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 196.8 bits (499), Expect = 1.9e-46
Identity = 105/143 (73.43%), Postives = 110/143 (76.92%), Query Frame = 0
Query: 76 SASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVA 135
SASLIIPPP L R ST FPKLR A+S PW R A A PRCVSQGGWG SVA
Sbjct: 60 SASLIIPPPSPPFLHRSSTVGFPKLRPISAISPPWFCRRVAAAA--PRCVSQGGWGGSVA 119
Query: 136 EVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSE 195
E +IEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGEDEGREPTDYNRRAKIFSTSSE
Sbjct: 120 EPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSE 179
Query: 196 VFQALKQHPDVVAPPPPPPPHHS 215
VFQALKQH D P PH +
Sbjct: 180 VFQALKQHSDAA-----PDPHQA 195
BLAST of MELO3C020169 vs. ExPASy TrEMBL
Match:
A0A1S3C540 (uncharacterized protein LOC103496760 OS=Cucumis melo OX=3656 GN=LOC103496760 PE=4 SV=1)
HSP 1 Score: 435.3 bits (1118), Expect = 1.5e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT 60
MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT
Sbjct: 1 MMNKRARDLVPLHGLPRSTSKWWLMAVLVFLLKNSYNNTNSKLPLPKSLPTFLKEKGEKT 60
Query: 61 KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC 120
KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC
Sbjct: 61 KRTNTSPPNKHNMQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRC 120
Query: 121 VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN 180
VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN
Sbjct: 121 VSQGGWGTSVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYN 180
Query: 181 RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS 215
RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS
Sbjct: 181 RRAKIFSTSSEVFQALKQHPDVVAPPPPPPPHHS 214
BLAST of MELO3C020169 vs. ExPASy TrEMBL
Match:
A0A5D3DSR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00240 PE=4 SV=1)
HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 73 MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE 132
MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE
Sbjct: 1 MQLSASLIIPPPLLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSVAE 60
Query: 133 VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV 192
VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV
Sbjct: 61 VDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSSEV 120
Query: 193 FQALKQHPDVVAPPPPPPPHHS 215
FQALKQHPDVVAPPPPPPPHHS
Sbjct: 121 FQALKQHPDVVAPPPPPPPHHS 142
BLAST of MELO3C020169 vs. ExPASy TrEMBL
Match:
A0A0A0KQQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223100 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.6e-59
Identity = 125/147 (85.03%), Postives = 128/147 (87.07%), Query Frame = 0
Query: 73 MQLSASLIIPPP---LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTS 132
MQLSASLI PPP L RPSTAFFP LR TP+LSSPWL HR AEA EPRCVSQGGWG+S
Sbjct: 1 MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSS 60
Query: 133 --VAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFS 192
V EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAIMGEDEGR+PTDYNRRAKIFS
Sbjct: 61 VGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIFS 120
Query: 193 TSSEVFQALKQHPDVVAPPPPPPPHHS 215
TSSEVFQALKQH D VA PPP PPHHS
Sbjct: 121 TSSEVFQALKQHSDAVA-PPPSPPHHS 146
BLAST of MELO3C020169 vs. ExPASy TrEMBL
Match:
A0A6J1JM89 (uncharacterized protein LOC111485933 OS=Cucurbita maxima OX=3661 GN=LOC111485933 PE=4 SV=1)
HSP 1 Score: 194.5 bits (493), Expect = 4.5e-46
Identity = 102/144 (70.83%), Postives = 110/144 (76.39%), Query Frame = 0
Query: 75 LSASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSV 134
+SASLIIPPP R ST FPK+R A+S PW R A A PRCVSQGGWG SV
Sbjct: 4 VSASLIIPPPSPSFFHRSSTVVFPKIRPISAISPPWFCRRVAAAA--PRCVSQGGWGGSV 63
Query: 135 AEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSS 194
AE +IEEWLKLGRL+EKCG GGKG+VELLECLE+EAIMGEDEGREPTDYNRRAKIFSTSS
Sbjct: 64 AEQEIEEWLKLGRLDEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSS 123
Query: 195 EVFQALKQHPDVVAPPPPPPPHHS 215
EVFQALKQH D P PH +
Sbjct: 124 EVFQALKQHSDAA-----PDPHQA 140
BLAST of MELO3C020169 vs. ExPASy TrEMBL
Match:
A0A6J1FW01 (uncharacterized protein LOC111447817 OS=Cucurbita moschata OX=3662 GN=LOC111447817 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 5.9e-46
Identity = 102/138 (73.91%), Postives = 107/138 (77.54%), Query Frame = 0
Query: 75 LSASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGTSV 134
+SASLI PPP R ST F KLR A+S WL R A A PRCVSQGGWG SV
Sbjct: 4 VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAA--PRCVSQGGWGGSV 63
Query: 135 AEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFSTSS 194
AE +IEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGEDEGREPTDYNRRAKIFSTSS
Sbjct: 64 AEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSS 123
Query: 195 EVFQALKQHPDVVAPPPP 209
EVFQALKQH D PPP
Sbjct: 124 EVFQALKQHSDAAPDPPP 139
BLAST of MELO3C020169 vs. TAIR 10
Match:
AT5G05220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 115 VVEPRCVSQGG-WGTSVAEVDIEEWLKLGRLEEKCGSG-GKGIVELLECLEKEAIMGEDE 174
V RCV+ G + ++ + EE +L + CG +G+ ELLECLEKEAIMG D+
Sbjct: 44 VAAARCVASGSDYAAAMEPITPEEEEELTQRRGICGGEVNRGVWELLECLEKEAIMGNDD 103
Query: 175 GREPTDYNRRAKIFSTSSEVFQALKQHPD 202
GR+P DYNRRAKIF SS++F+ L + D
Sbjct: 104 GRDPRDYNRRAKIFDKSSKIFKNLNEQRD 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008456969.1 | 3.1e-118 | 100.00 | PREDICTED: uncharacterized protein LOC103496760 [Cucumis melo] | [more] |
KAA0067024.1 | 2.8e-74 | 100.00 | uncharacterized protein E6C27_scaffold38G00600 [Cucumis melo var. makuwa] >TYK26... | [more] |
XP_011655051.1 | 3.3e-59 | 85.03 | uncharacterized protein LOC105435471 [Cucumis sativus] >KGN50752.1 hypothetical ... | [more] |
XP_038892559.1 | 4.8e-58 | 80.14 | uncharacterized protein LOC120081603 [Benincasa hispida] | [more] |
XP_023547061.1 | 1.9e-46 | 73.43 | uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3C540 | 1.5e-118 | 100.00 | uncharacterized protein LOC103496760 OS=Cucumis melo OX=3656 GN=LOC103496760 PE=... | [more] |
A0A5D3DSR0 | 1.3e-74 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KQQ4 | 1.6e-59 | 85.03 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223100 PE=4 SV=1 | [more] |
A0A6J1JM89 | 4.5e-46 | 70.83 | uncharacterized protein LOC111485933 OS=Cucurbita maxima OX=3661 GN=LOC111485933... | [more] |
A0A6J1FW01 | 5.9e-46 | 73.91 | uncharacterized protein LOC111447817 OS=Cucurbita moschata OX=3662 GN=LOC1114478... | [more] |
Match Name | E-value | Identity | Description | |
AT5G05220.1 | 4.1e-15 | 47.19 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |