MELO3C020160.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C020160.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 13436594 .. 13436874 (-)
RNA-Seq ExpressionMELO3C020160.jh1
SyntenyMELO3C020160.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGTTTGAAGGCTGAAAGAGGAAGAAGAAGGTCCATCGCCGTTGCCCATCGTCCATTGCTTGGCGTCGCCGTTGACGCTTGTGAGCTGTCATTCGTCCCTCATCGGTAACTGTTTGTTTTTTATGTTTTTTCTTTGTTTTGGTTTGAGTTTGAGGAAAAAAACTAAATAGGTATGTTTTTGTGATTGTCAAGGCCTTCTCTTGTGTGGTTTTCTCCTTGGCGTTACCGTTTGTCGCTGCCCTTTCGCCGTTGCCGCCATCCGCCCCTCGCCGGTAA

mRNA sequence

ATGAAGGGTTTGAAGGCTGAAAGAGGAAGAAGAAGGTCCATCGCCGTTGCCCATCGTCCATTGCTTGGCGTCGCCGTTGACGCTTGTGAGCTGTCATTCGTCCCTCATCGGTATGTTTTTGTGATTGTCAAGGCCTTCTCTTGTGTGGTTTTCTCCTTGGCGTTACCGTTTGTCGCTGCCCTTTCGCCGTTGCCGCCATCCGCCCCTCGCCGGTAA

Coding sequence (CDS)

ATGAAGGGTTTGAAGGCTGAAAGAGGAAGAAGAAGGTCCATCGCCGTTGCCCATCGTCCATTGCTTGGCGTCGCCGTTGACGCTTGTGAGCTGTCATTCGTCCCTCATCGGTATGTTTTTGTGATTGTCAAGGCCTTCTCTTGTGTGGTTTTCTCCTTGGCGTTACCGTTTGTCGCTGCCCTTTCGCCGTTGCCGCCATCCGCCCCTCGCCGGTAA

Protein sequence

MKGLKAERGRRRSIAVAHRPLLGVAVDACELSFVPHRYVFVIVKAFSCVVFSLALPFVAALSPLPPSAPRR
Homology
[Close]
BLAST of MELO3C020160.jh1 vs. NCBI nr
Match: KGN50171.1 (hypothetical protein Csa_000553 [Cucumis sativus])

HSP 1 Score: 50.4 bits (119), Expect = 3.26e-06
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 1  MKGLKAERGRRRSIAVAHRPLLGVAVDACELSFVPHR 37
          MKGLKAERGRRRSI V HR LL V +DACEL   P R
Sbjct: 1  MKGLKAERGRRRSIVV-HRSLLVVTLDACELPSAPRR 36

[Close]
BLAST of MELO3C020160.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KR16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157300 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.58e-06
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 1  MKGLKAERGRRRSIAVAHRPLLGVAVDACELSFVPHR 37
          MKGLKAERGRRRSI V HR LL V +DACEL   P R
Sbjct: 1  MKGLKAERGRRRSIVV-HRSLLVVTLDACELPSAPRR 36

The following BLAST results are available for this feature:
BLAST of MELO3C020160.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50171.13.26e-0672.97hypothetical protein Csa_000553 [Cucumis sativus][more]
BLAST of MELO3C020160.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C020160.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR161.58e-0672.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157300 PE=4 SV=1[more]
BLAST of MELO3C020160.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020160.jh1.t1MELO3C020160.jh1.t1mRNA