MELO3C020081.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C020081.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein MNN4-like
Location	chr10: 11886240 .. 11887261 (-)
RNA-Seq Expression	MELO3C020081.jh1
Synteny	MELO3C020081.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGGAGGAAAGGGAGAAACAAGGTGAGAAAGACCAAGAAATACCTCCTCGCCTATTGCTCCTACAGAATTTAAGAGGGTCGCATCAAAGGCCCAGAAAAAAAGTAAAATGTGGCATCTAACCTCCTTAAGCTAAAGGTCATCGCACAGGGTGTTAAGGCCCGTTTGAAAGAAAGGAAGGAAACAAAGTTGAGGGAGCGGGAGAGCTCCTTAACAAAGCTGAGAAAATAACCCTCTCCGTGAAGAAGGATAAGGCGAAGAAGACAAGTGAAGCATATTGCGATGAGTTAGAGAAGGAGCTGGAGGATTTGAGTCCTTTAGAAGATGAAGAAGTGGTGAAACCTTCAAAGAAAAGGAAGGTTACAATGAAGATGAAGGTCTTGAGTAAGCAATTCGCAGATAGGCAAGAAGAGAAGGAAAAGAAAGGTCCTCATATTGAACATATAAAAGAAGAAGAAGAGGATCAAGAAAGCGAGATGGAAAAGCCCCTATCCGCAAATGAAGTCAGTAAGCAATTTATGATAGAGAAGAGGCTCTATCCATTCAAGGGCATTATGCTAGCGTTCTTAGCATCACCCATCAGAGCATTCAGTGTAGGAAAGTTTTTCAAAGGGGTGACTACAATACGAGCAGACGTAAAAAATTTATTTTACAAAGGATATATCAGCAAAGAGACACTACGTAATGATCAAGGGAAAGAAAGTGTATTTTAGGCCAGAAGTAATCAACGCGTTATATAGACTAGATGACAACGTGATTGGGCATGCAATTTTCAAGAACTCAACGCAACAAGATATGCAAGATGCATTGGCAAGAGTTTCTTGGCCAGGTACAAAGTGGGATAGAACACCAACTGGGAAGTACCAGCTCTTCCCACACAATTTGAACACAGCAGCCAATGTTCGATTGCTTTTTTGTCAAGAAGAAAAAGATCATGCCTACGTGCCACAACAGCACCATTTCCATGGACAAAGTCATGTTCCTCTATTGCAGTATAGAGGAGATTCCGATGAGTATGGATGA

mRNA sequence

GAGGGAGGAAAGGGAGAAACAAGGCCCGTTTGAAAGAAAGGAAGGAAACAAAGTTGAGGGAGCGGGAGAGCTCCTTAACAAAGCTGAGAAAATAACCCTCTCCGTGAAGAAGGATAAGGCGAAGAAGACAAGTGAAGCATATTGCGATGAGTTAGAGAAGGAGCTGGAGGATTTGAGTCCTTTAGAAGATGAAGAAGTGGTGAAACCTTCAAAGAAAAGGAAGGTTACAATGAAGATGAAGGTCTTGAGTAAGCAATTCGCAGATAGGCAAGAAGAGAAGGAAAAGAAAGGTCCTCATATTGAACATATAAAAGAAGAAGAAGAGGATCAAGAAAGCGAGATGGAAAAGCCCCTATCCGCAAATGAAGTCAGTAAGCAATTTATGATAGAGAAGAGGCTCTATCCATTCAAGGGCATTATGCTAGCGTTCTTAGCATCACCCATCAGAGCATTCAGTGTAGGAAAGTTTTTCAAAGGGGTGACTACAATACGAGCAGACGTAAAAAATTTATTTTACAAAGGATATATCAGCAAAGAGACACTACGTAATGATCAAGGGAAAGAAAGTGTATTTTAGGCCAGAAGTAATCAACGCGTTATATAGACTAGATGACAACGTGATTGGGCATGCAATTTTCAAGAACTCAACGCAACAAGATATGCAAGATGCATTGGCAAGAGTTTCTTGGCCAGGTACAAAGTGGGATAGAACACCAACTGGGAAGTACCAGCTCTTCCCACACAATTTGAACACAGCAGCCAATGTTCGATTGCTTTTTTGTCAAGAAGAAAAAGATCATGCCTACGTGCCACAACAGCACCATTTCCATGGACAAAGTCATGTTCCTCTATTGCAGTATAGAGGAGATTCCGATGAGTATGGATGA

Coding sequence (CDS)

ATGAAGATGAAGGTCTTGAGTAAGCAATTCGCAGATAGGCAAGAAGAGAAGGAAAAGAAAGGTCCTCATATTGAACATATAAAAGAAGAAGAAGAGGATCAAGAAAGCGAGATGGAAAAGCCCCTATCCGCAAATGAAGTCAGTAAGCAATTTATGATAGAGAAGAGGCTCTATCCATTCAAGGGCATTATGCTAGCGTTCTTAGCATCACCCATCAGAGCATTCAGTGTAGGAAAGTTTTTCAAAGGGGTGACTACAATACGAGCAGACGTAAAAAATTTATTTTACAAAGGATATATCAGCAAAGAGACACTACGTAATGATCAAGGGAAAGAAAGTGTATTTTAG

Protein sequence

MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKETLRNDQGKESVF

Homology

[Close]

BLAST of MELO3C020081.jh1 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (473), Expect = 3.20e-56
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MKMKVLSKQFADRQEEKEKKGPHIE IKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF
Sbjct: 88  MKMKVLSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 147

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           KGIMLAFLASPIRAFS GKFFKGVTTIRADVKNLFYKGYISK+
Sbjct: 148 KGIMLAFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYISKK 190

[Close]

BLAST of MELO3C020081.jh1 vs. NCBI nr
Match: KAA0064202.1 (hypothetical protein E6C27_scaffold548G001440 [Cucumis melo var. makuwa] >TYK02826.1 hypothetical protein E5676_scaffold218G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 4.73e-20
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MK K L +QF   Q+EK K+ P      E EE +ES+ EKPLS  +VSKQFMIEK LYP+
Sbjct: 1   MKKKTLKEQFRKWQDEKAKRKPQN---NEGEEGKESDSEKPLSFTKVSKQFMIEKGLYPY 60

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           +  M  FL  PI+AF   +FF+GV  I  DV  +FYKGYI++E
Sbjct: 61  QRAMPGFLTIPIQAFKWKRFFQGVIAIIPDVVKMFYKGYINEE 100

[Close]

BLAST of MELO3C020081.jh1 vs. NCBI nr
Match: TYJ99631.1 (hypothetical protein E5676_scaffold562G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 7.70e-17
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MK K L  QF   + EK K+ P        EE +ES+   PLS+  VSKQFMIEK LYP+
Sbjct: 1   MKKKTLKAQFEKTRAEKAKRKPQNNDA---EEGEESDSNGPLSSIRVSKQFMIEKGLYPY 60

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           +G M   LA  I+AF   +FF+ VT+I+ +V  LFYKGYI+KE
Sbjct: 61  QGAMPGSLAPLIQAFRWKRFFRCVTSIKPEVVKLFYKGYINKE 100

[Close]

BLAST of MELO3C020081.jh1 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 3.08e-14
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 2   KMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFK 61
           K +VL  Q A ++E+K K       ++ E+E Q+SE E  L A E+ K FMIEK ++PFK
Sbjct: 85  KKRVLEGQDAMKREKKNKT------VQREQESQKSEQEGVLFAEELGKHFMIEKGIFPFK 144

Query: 62  GIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           G +  FL SPI+A    +FF+GVTTIR  V NLFY G I+ E
Sbjct: 145 GQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTE 180

[Close]

BLAST of MELO3C020081.jh1 vs. NCBI nr
Match: TYJ96034.1 (hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.03e-13
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 38  MEKPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYK 97
           ME+PLSA  VSK F++EK LY ++G M  FLASPIRA    +FF+GV  IR  V +LFY+
Sbjct: 1   MEEPLSAKRVSKLFIVEKGLYIYRGTMPEFLASPIRALKWKRFFQGVNAIRPGVVDLFYR 60

Query: 98  GYIS-KETLRNDQGKESVF 115
           GYI+ KE     +GK   F
Sbjct: 61  GYINAKEHYAEVKGKRVDF 79

[Close]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 186 bits (473), Expect = 1.55e-56
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MKMKVLSKQFADRQEEKEKKGPHIE IKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF
Sbjct: 88  MKMKVLSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 147

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           KGIMLAFLASPIRAFS GKFFKGVTTIRADVKNLFYKGYISK+
Sbjct: 148 KGIMLAFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYISKK 190

[Close]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V756 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00180 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.29e-20
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MK K L +QF   Q+EK K+ P      E EE +ES+ EKPLS  +VSKQFMIEK LYP+
Sbjct: 1   MKKKTLKEQFRKWQDEKAKRKPQN---NEGEEGKESDSEKPLSFTKVSKQFMIEKGLYPY 60

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           +  M  FL  PI+AF   +FF+GV  I  DV  +FYKGYI++E
Sbjct: 61  QRAMPGFLTIPIQAFKWKRFFQGVIAIIPDVVKMFYKGYINEE 100

[Close]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BLM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00010 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.73e-17
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MKMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPF 60
           MK K L  QF   + EK K+ P        EE +ES+   PLS+  VSKQFMIEK LYP+
Sbjct: 1   MKKKTLKAQFEKTRAEKAKRKPQNNDA---EEGEESDSNGPLSSIRVSKQFMIEKGLYPY 60

Query: 61  KGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           +G M   LA  I+AF   +FF+ VT+I+ +V  LFYKGYI+KE
Sbjct: 61  QGAMPGSLAPLIQAFRWKRFFRCVTSIKPEVVKLFYKGYINKE 100

[Close]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.49e-14
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 2   KMKVLSKQFADRQEEKEKKGPHIEHIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFK 61
           K +VL  Q A ++E+K K       ++ E+E Q+SE E  L A E+ K FMIEK ++PFK
Sbjct: 85  KKRVLEGQDAMKREKKNKT------VQREQESQKSEQEGVLFAEELGKHFMIEKGIFPFK 144

Query: 62  GIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYKGYISKE 103
           G +  FL SPI+A    +FF+GVTTIR  V NLFY G I+ E
Sbjct: 145 GQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTE 180

[Close]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BAP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00500 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.00e-14
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 38  MEKPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSVGKFFKGVTTIRADVKNLFYK 97
           ME+PLSA  VSK F++EK LY ++G M  FLASPIRA    +FF+GV  IR  V +LFY+
Sbjct: 1   MEEPLSAKRVSKLFIVEKGLYIYRGTMPEFLASPIRALKWKRFFQGVNAIRPGVVDLFYR 60

Query: 98  GYIS-KETLRNDQGKESVF 115
           GYI+ KE     +GK   F
Sbjct: 61  GYINAKEHYAEVKGKRVDF 79

The following BLAST results are available for this feature:

BLAST of MELO3C020081.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25886.1	3.20e-56	97.09	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0064202.1	4.73e-20	52.43	hypothetical protein E6C27_scaffold548G001440 [Cucumis melo var. makuwa] >TYK028...	[more]
TYJ99631.1	7.70e-17	49.51	hypothetical protein E5676_scaffold562G00010 [Cucumis melo var. makuwa]	[more]
KAA0048500.1	3.08e-14	48.04	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
TYJ96034.1	1.03e-13	53.16	hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C020081.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DQE5	1.55e-56	97.09	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00...	[more]
A0A5A7V756	2.29e-20	52.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BLM8	3.73e-17	49.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TZE0	1.49e-14	48.04	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3BAP9	5.00e-14	53.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C020081.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020081.jh1.t1	MELO3C020081.jh1.t1	mRNA