MELO3C019968 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAACCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGCCGTTGGAATGCTTGCTTGGATTATGGATACGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACGGTTGTGACAACGGGACAAGTGAATGCCACCGAGCCAGAGAACGACAACAATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATATGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGTTGTAACCCCTGCCAAAACTCCACGTCCTTTACTCACCTGGAAGTGA ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAACCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGCCGTTGGAATGCTTGCTTGGATTATGGATACGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACGGTTGTGACAACGGGACAAGTGAATGCCACCGAGCCAGAGAACGACAACAATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATATGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGTTGTAACCCCTGCCAAAACTCCACGTCCTTTACTCACCTGGAAGTGA ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAACCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGCCGTTGGAATGCTTGCTTGGATTATGGATACGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACGGTTGTGACAACGGGACAAGTGAATGCCACCGAGCCAGAGAACGACAACAATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATATGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGTTGTAACCCCTGCCAAAACTCCACGTCCTTTACTCACCTGGAAGTGA MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTGQVNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGVILYDPNGNVVTPAKTPRPLLTWK Homology
BLAST of MELO3C019968 vs. NCBI nr
Match: XP_008456721.1 (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo] >KAA0031627.1 putative Nucleolar protein 16 [Cucumis melo var. makuwa] >TYK04482.1 putative Nucleolar protein 16 [Cucumis melo var. makuwa]) HSP 1 Score: 291.6 bits (745), Expect = 3.6e-75 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C019968 vs. NCBI nr
Match: XP_011656615.1 (uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_004865 [Cucumis sativus]) HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70 Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of MELO3C019968 vs. NCBI nr
Match: XP_038886392.1 (uncharacterized protein LOC120076591 [Benincasa hispida]) HSP 1 Score: 256.9 bits (655), Expect = 9.8e-65 Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 0
BLAST of MELO3C019968 vs. NCBI nr
Match: XP_022134433.1 (uncharacterized protein LOC111006683 [Momordica charantia]) HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63 Identity = 118/138 (85.51%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of MELO3C019968 vs. NCBI nr
Match: XP_022990795.1 (uncharacterized protein LOC111487577 [Cucurbita maxima]) HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62 Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of MELO3C019968 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.7e-75 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C019968 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.7e-75 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C019968 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 7.6e-71 Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of MELO3C019968 vs. ExPASy TrEMBL
Match: A0A6J1C1Z5 (uncharacterized protein LOC111006683 OS=Momordica charantia OX=3673 GN=LOC111006683 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 6.9e-64 Identity = 118/138 (85.51%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of MELO3C019968 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 7.6e-63 Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of MELO3C019968 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 5.8e-23 Identity = 57/123 (46.34%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of MELO3C019968 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of MELO3C019968 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06 Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of MELO3C019968 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04 Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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