MELO3C019655 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019655
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein ROOT HAIR DEFECTIVE 3
Location	chr11: 23694399 .. 23695392 (+)
RNA-Seq Expression	MELO3C019655
Synteny	MELO3C019655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATATGGTTGGCTAGATGTGCCGATATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGAAAGAGAGCGTGGAGAGGTGCACTCTTATGCCCTTTTTGGTTTTCATGTGTTTCTTTTGCTTGTACTTTCGTTTATTTTTGTCTTTTATTATTATTTATTTATTTATTCCATAAATATGTTTGTCAATGTTTTAAATTCAGTATCATTGCATGCTTCTTTTTGCAGATACACGTATGTGTGTGTATCTAAGGATATGTATGTGTGTATGTATGTATGGATGTTCATGTATGTATTTATGCGAACATACTTATTTTTTTTGTATCACAACAAGCTATGATGTATACTTTGGTTGTTTCTTAATTTGCTTTTGTCACATTCTTTTTAAGGACGACACTACATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGTCGTGTCAGATATAGTGCTAATAAATATGTGAGTGCCATTAGTTTTGTTTTTCAAACATTTCTTTTATCTTGTAACATGTTTTTCCGTTTGATTTTCTTCTAAAATTTATTGTTTCCACACTATCTTGTTTAAGAAGTTGTTATAATTTAATTTAGGTGGTATCACGATATTGGCCGTGAGCAGGTTGCAATTAAGCCTTTCCTCAAAACTGTATTTTAGATATTCCCTTTAATTTGGTTGGGGGTCATGGTGTATCTTTTATAGTATTAATTTAATAAATTTTGGTTGTTGTTGTATGCAGGTCATGATGAGATTGTTCAGTCCACGTAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGGTCTGTTAATATTTCCTGGGTAGTTTATATCTTGAGTTGTTGTAGAAGAACCATATGTTGCAAGCTTTTAACTTTTTTAATTTTCTTTGTTGCTTTTGTTAATTTTTTCTATATGTAGACACCATTGAAAAATTTAAAGCATGTTCTTAGAGAGGATGTAAAGAAGGTAAATTATTGGTGCTCATAA

mRNA sequence

GTATATGGTTGGCTAGATGTGCCGATATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGAAAGAGAGCGTGGAGAGGACGACACTACATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGTCGTGTCAGATATAGTGCTAATAAATATGTGGTATCACGATATTGGCCGTGAGCAGGTTGCAATTAAGCCTTTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACGTAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGACACCATTGAAAAATTTAAAGCATGTTCTTAGAGAGGATGTAAAGAAGGTAAATTATTGGTGCTCATAA

Coding sequence (CDS)

ATGGATTTGGAAGGAACTGATGAAAGAGAGCGTGGAGAGGACGACACTACATTTGAGAAGCAAAGTGCCCTCTTTGCGCTTGTCGTGTCAGATATAGTGCTAATAAATATGTGGTATCACGATATTGGCCGTGAGCAGGTTGCAATTAAGCCTTTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACGTAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGACACCATTGAAAAATTTAAAGCATGTTCTTAGAGAGGATGTAAAGAAGGTAAATTATTGGTGCTCATAA

Protein sequence

MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKVNYWCS

Homology

[Close]

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot
Match: P93042 (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.8e-37
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTTLMFVIRDKTRTPL+NL+ VLRED++K+
Sbjct: 153 MRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKI 189

[Close]

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot
Match: Q9SSN0 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-36
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL +SDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 98  MDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 157

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTT++FVIRDKTRTPL+NL+ VLRED++K+
Sbjct: 158 MRLFSPRKTTMLFVIRDKTRTPLENLEPVLREDIQKI 194

[Close]

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot
Match: Q0JLS6 (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.1e-36
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTTL+FVIRDK++TPL+NL+ +LRED++K+
Sbjct: 153 MRLFSPRKTTLLFVIRDKSKTPLENLEPILREDIQKI 189

[Close]

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot
Match: Q2QMH2 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.3e-36
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQS+LFAL +SDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTAFEKQSSLFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTTL+FVIRDKTRTPL++L+ VLRED++K+
Sbjct: 156 MRLFSPRKTTLLFVIRDKTRTPLEHLEPVLREDIQKI 192

[Close]

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot
Match: Q9FKE9 (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-34
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDTTFEKQSALFA+ V+DIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           +RLFSPRKTTL+FVIRDKT+TP++ L+  LRED++K+
Sbjct: 156 LRLFSPRKTTLLFVIRDKTKTPIELLERALREDIQKI 192

[Close]

BLAST of MELO3C019655 vs. NCBI nr
Match: ONM40609.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 210

[Close]

BLAST of MELO3C019655 vs. NCBI nr
Match: AQK96218.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ11121.1 hypothetical protein Zm00014a_034991 [Zea mays] >PWZ11122.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 152

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 153 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 186

[Close]

BLAST of MELO3C019655 vs. NCBI nr
Match: PWZ33891.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ33892.1 hypothetical protein Zm00014a_042861 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 210

[Close]

BLAST of MELO3C019655 vs. NCBI nr
Match: ONM40596.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >ONM40602.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 195

[Close]

BLAST of MELO3C019655 vs. NCBI nr
Match: ONM40608.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 5.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 195

[Close]

BLAST of MELO3C019655 vs. ExPASy TrEMBL
Match: A0A1D6NK19 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 195

[Close]

BLAST of MELO3C019655 vs. ExPASy TrEMBL
Match: A0A3L6FNJ4 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=Zm00014a_042861 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 210

[Close]

BLAST of MELO3C019655 vs. ExPASy TrEMBL
Match: A0A3L6DU23 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=Zm00014a_034991 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 152

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 153 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 186

[Close]

BLAST of MELO3C019655 vs. ExPASy TrEMBL
Match: A0A1D6NK21 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 195

[Close]

BLAST of MELO3C019655 vs. ExPASy TrEMBL
Match: A0A1D6NK28 (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKTVMMRL 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           FSPRKTTL+FVIRDK+RTPL+NL+ +LRED++K+
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILREDIQKI 210

[Close]

BLAST of MELO3C019655 vs. TAIR 10
Match: AT3G13870.2 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 155.2 bits (391), Expect = 2.7e-38
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 29  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 88

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTTLMFVIRDKTRTPL+NL+ VLRED++K+
Sbjct: 89  MRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKI 125

[Close]

BLAST of MELO3C019655 vs. TAIR 10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 155.2 bits (391), Expect = 2.7e-38
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL VSDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTTLMFVIRDKTRTPL+NL+ VLRED++K+
Sbjct: 153 MRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKI 189

[Close]

BLAST of MELO3C019655 vs. TAIR 10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-37
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDT FEKQSALFAL +SDIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 98  MDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 157

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           MRLFSPRKTT++FVIRDKTRTPL+NL+ VLRED++K+
Sbjct: 158 MRLFSPRKTTMLFVIRDKTRTPLENLEPVLREDIQKI 194

[Close]

BLAST of MELO3C019655 vs. TAIR 10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 146.7 bits (369), Expect = 9.6e-36
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1   MDLEGTDERERGEDDTTFEKQSALFALVVSDIVLINMWYHDIGREQVAIKPFLKT---VM 60
           MDLEGTD RERGEDDTTFEKQSALFA+ V+DIVLINMW HDIGREQ A KP LKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPRKTTLMFVIRDKTRTPLKNLKHVLREDVKKV 95
           +RLFSPRKTTL+FVIRDKT+TP++ L+  LRED++K+
Sbjct: 156 LRLFSPRKTTLLFVIRDKTKTPIELLERALREDIQKI 192

The following BLAST results are available for this feature:

BLAST of MELO3C019655 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93042	3.8e-37	83.51	Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1	[more]
Q9SSN0	1.9e-36	80.41	Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g7...	[more]
Q0JLS6	7.1e-36	79.38	Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 P...	[more]
Q2QMH2	9.3e-36	79.38	Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FKE9	1.3e-34	76.29	Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g4...	[more]

BLAST of MELO3C019655 vs. NCBI nr


Match Name	E-value	Identity	Description
ONM40609.1	5.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 [Zea mays]	[more]
AQK96218.1	5.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ11121.1 hypothetical protein Zm0001...	[more]
PWZ33891.1	5.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ33892.1 hypothetical protein Zm0001...	[more]
ONM40596.1	5.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >ONM40602.1 Protein ROOT HAIR DEFECTIVE...	[more]
ONM40608.1	5.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 [Zea mays]	[more]

BLAST of MELO3C019655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1D6NK19	2.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04...	[more]
A0A3L6FNJ4	2.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=Zm00014a_042861 PE=...	[more]
A0A3L6DU23	2.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=Zm00014a_034991 PE=...	[more]
A0A1D6NK21	2.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04...	[more]
A0A1D6NK28	2.8e-35	82.98	Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04...	[more]

BLAST of MELO3C019655 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13870.2	2.7e-38	83.51	Root hair defective 3 GTP-binding protein (RHD3)	[more]
AT3G13870.1	2.7e-38	83.51	Root hair defective 3 GTP-binding protein (RHD3)	[more]
AT1G72960.1	1.3e-37	80.41	Root hair defective 3 GTP-binding protein (RHD3)	[more]
AT5G45160.1	9.6e-36	76.29	Root hair defective 3 GTP-binding protein (RHD3)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008803	RHD3/Sey1	PFAM	PF05879	RHD3	coord: 1..94 e-value: 3.0E-44 score: 151.4
IPR008803	RHD3/Sey1	PANTHER	PTHR45923	PROTEIN SEY1	coord: 1..94
None	No IPR available	PANTHER	PTHR45923:SF15	PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG	coord: 1..94
IPR030386	GB1/RHD3-type guanine nucleotide-binding (G) domain	PROSITE	PS51715	G_GB1_RHD3	coord: 1..99 score: 18.459887
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019655.1	MELO3C019655.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005525	GTP binding