MELO3C019363 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019363
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	patellin-1-like
Location	chr11: 12696964 .. 12698026 (+)
RNA-Seq Expression	MELO3C019363
Synteny	MELO3C019363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACTAATTACAAATCTCAAATCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTAAATTTGGCTTCCGACAATCAAGCTTAAACTTTCTTTCTCTCTCTCTCTCTCTCTTTTTTAAATAATCATAATTCAGAATCATATAACTATCTTTCTCGATACATTTGAATTTCTTTTATATATGGATATGTGAAATTCTTTTGAAATATTTTGAACAAATTTGGAACTGAGTCATTGTTCTTTGCAGGTTGTAACACCGGATACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACTTGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAGTGTAATAAGCTATAAAAGGATTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAATAACTTA

mRNA sequence

AAAAACTAATTACAAATCTCAAATCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTTGTAACACCGGATACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACTTGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAGTGTAATAAGCTATAAAAGGATTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAATAACTTA

Coding sequence (CDS)

AAACTAATTACAAATCTCAAATCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTTGTAACACCGGATACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAA

Protein sequence

KLITNLKSSFTHCHSILSSLSYKIHSASSFFHPILSFSSSIPSPFHKDFSMATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPALEETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE

Homology

[Close]

BLAST of MELO3C019363 vs. NCBI nr
Match: XP_008455963.1 (PREDICTED: patellin-1-like [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 170
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 171 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363 vs. NCBI nr
Match: KAA0053292.1 (patellin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 170
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 171 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363 vs. NCBI nr
Match: XP_004140479.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothetical protein Csa_004785 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 7.6e-37
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 111 EETETPVEFETKEVVVEEESKEEKN-EEEVVEEEEKEEKKTEEAAEGAVLEETKASEAET 170
           EE ETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 171 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           PV EE EEKAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PV-EEAEEKAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of MELO3C019363 vs. NCBI nr
Match: XP_038900947.1 (cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-31
Identity = 113/155 (72.90%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVV P+T +PEEATEV  VEVP PKVEEEEAPPP   DPPAEEVAKEE+ TDPPA 
Sbjct: 1   MATAEVVPPETVLPEEATEV--VEVPPPKVEEEEAPPPAAVDPPAEEVAKEEEATDPPAA 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 170
           EETETPVE ETKEVVVEEE KEEK E         EE+K EEA E  V EE+K +EAE P
Sbjct: 61  EETETPVEVETKEVVVEEEPKEEKKE---------EEEKEEEAGEAVVEEESKPAEAEAP 120

Query: 171 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
            EEE    AVEVVEEKPVEETEEKPEEE  AEKAE
Sbjct: 121 AEEE----AVEVVEEKPVEETEEKPEEEPAAEKAE 140

[Close]

BLAST of MELO3C019363 vs. NCBI nr
Match: KAG6604898.1 (hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-05
Identity = 89/170 (52.35%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVT + A+ EE T   EV+VP  KVEEE    P   DPPAEE+AKEE      A 
Sbjct: 1   MATAEVVTQEAALQEEVT---EVQVPPLKVEEE---APAAVDPPAEELAKEE------AA 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEE-----------EEKEEKKTEE---AAEG 170
           E  E PVE ETKEVV EEE +EE+ +EEVVEE           EEKEE   E     A  
Sbjct: 61  EVAEPPVEVETKEVVAEEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEPAVAAA 120

Query: 171 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKP-EEEVEAEKAE 206
           A  EE +  EA+   E   EE+AVE V+E   EE EEKP EEE  AEKAE
Sbjct: 121 AEEEEEEEEEAKPEAEPAAEEEAVE-VKETAAEEAEEKPAEEEPAAEKAE 157

[Close]

BLAST of MELO3C019363 vs. ExPASy TrEMBL
Match: A0A5A7UC23 (Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001030 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 170
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 171 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363 vs. ExPASy TrEMBL
Match: A0A1S3C239 (patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 170
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 171 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363 vs. ExPASy TrEMBL
Match: A0A0A0KAS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 111 EETETPVEFETKEVVVEEESKEEKN-EEEVVEEEEKEEKKTEEAAEGAVLEETKASEAET 170
           EE ETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 171 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 206
           PV EE EEKAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PV-EEAEEKAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of MELO3C019363 vs. ExPASy TrEMBL
Match: A0A6J1I4V1 (fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469887 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.2e-05
Identity = 89/167 (53.29%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 51  MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 110
           MATAEVVT + A+ EE T   EVEVP  KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVT---EVEVPPLKVEEE---APAAADPPAEEVAKEE------AA 60

Query: 111 EETETPVEFETKEVVVEEESKEEKNEEEVVEE-----------EEKEEKKTEEAAEGAVL 170
           E  E PVE ETKEVV +EE  EE+ +EEVVEE           EEKEE   E     A  
Sbjct: 61  EVAEPPVEVETKEVVAKEE--EEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEPAVAEE 120

Query: 171 EETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKP-EEEVEAEKAE 206
           EE +  EA+   E   EE+A E V+E   EE EEKP EEE  AEKAE
Sbjct: 121 EEEEEEEAKPEAEPAAEEEAAE-VKETGAEEAEEKPAEEEPAAEKAE 152

The following BLAST results are available for this feature:

BLAST of MELO3C019363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455963.1	2.3e-57	100.00	PREDICTED: patellin-1-like [Cucumis melo]	[more]
KAA0053292.1	2.3e-57	100.00	patellin-1-like [Cucumis melo var. makuwa]	[more]
XP_004140479.1	7.6e-37	82.05	cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothe...	[more]
XP_038900947.1	2.1e-31	72.90	cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benin...	[more]
KAG6604898.1	2.6e-05	52.35	hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C019363 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC23	1.1e-57	100.00	Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G0010...	[more]
A0A1S3C239	1.1e-57	100.00	patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1	[more]
A0A0A0KAS3	3.7e-37	82.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1	[more]
A0A6J1I4V1	8.2e-05	53.29	fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of MELO3C019363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019363.1	MELO3C019363.1	mRNA